KCC001699A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001699A_C01 KCC001699A_c01
caagagtgcgattactgtggctaggagatgccgaggtgtccagcgactgaagcgcttgta
aattggagccttgcttgggcGATATCGCTGCATCTTGTTGTCATTACGTGAATGCGCAAC
TGAGCTGCCTCACATATCGGTACCAGCATGTAACACCATGTTGTTGCATGCCGTTCGACA
TGACCACTTCTGCGTGTGGGCGCATGGGGGCCCTGTGAAACCCAAGCCTACCTACCGAGT
CCCCGTCGACTCATCATTTGGCGTCCAGCCTCATCCTCGTCAACGTTAAATCCAATTTAA
TGGTAACCTTCGTTTGTCAGTGCAACTTCCACCTCATGAGCCCATACAAAGAGGCTCCCG
CTTTCCTTGCGTATCATAACACGCCGCAACCTGACTGTGCACACCTGCTAGTTGTTTTGA
GTACCCTGCACACACGCCGCGTGCTTCACGACCCCATAACACGACACAGACATCCTCCTG
CCAGCCCAGCGCCGGCCAACGGCGCGTTACTTGGCGGTCGGCACACGCTTGGTGACACGC
GCCACGAGACGGGCTGGTGGCTGCGCGTCTGGCC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001699A_C01 KCC001699A_c01
         (574 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAH07216.1| C5orf4 protein [Homo sapiens]                           33  3.6
dbj|BAB19002.1| hypothetical protein [Macaca fascicularis]             33  3.6
dbj|BAB33076.1| hypothetical protein [Macaca fascicularis]             33  3.6
gb|AAH44395.1| Unknown (protein for MGC:55420) [Danio rerio]           33  3.6
gb|AAH04506.1|AAH04506 Unknown (protein for IMAGE:3838106) [Homo...    33  3.6

>gb|AAH07216.1| C5orf4 protein [Homo sapiens]
          Length = 333

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 16/45 (35%), Positives = 24/45 (52%)
 Frame = +3

Query: 297 LMVTFVCQCNFHLMSPYKEAPAFLAYHNTPQPDCAHLLVVLSTLH 431
           L++T +  C +HL  P+  +P F  YH+     C  +L VL  LH
Sbjct: 255 LIITTISHCGYHL--PFLPSPEFHDYHHLKFNQCYGVLGVLDHLH 297

>dbj|BAB19002.1| hypothetical protein [Macaca fascicularis]
          Length = 333

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 16/45 (35%), Positives = 24/45 (52%)
 Frame = +3

Query: 297 LMVTFVCQCNFHLMSPYKEAPAFLAYHNTPQPDCAHLLVVLSTLH 431
           L++T +  C +HL  P+  +P F  YH+     C  +L VL  LH
Sbjct: 255 LIITTISHCGYHL--PFLPSPEFHDYHHLKFNQCYGVLGVLDHLH 297

>dbj|BAB33076.1| hypothetical protein [Macaca fascicularis]
          Length = 333

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 16/45 (35%), Positives = 24/45 (52%)
 Frame = +3

Query: 297 LMVTFVCQCNFHLMSPYKEAPAFLAYHNTPQPDCAHLLVVLSTLH 431
           L++T +  C +HL  P+  +P F  YH+     C  +L VL  LH
Sbjct: 255 LIITTISHCGYHL--PFLPSPEFHDYHHLKFNQCYGVLGVLDHLH 297

>gb|AAH44395.1| Unknown (protein for MGC:55420) [Danio rerio]
          Length = 323

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 297 LMVTFVCQCNFHLMSPYKEAPAFLAYHNTPQPDCAHLLVVLSTLH 431
           L+VT V  C +HL  P   +P F  YH+     C  +L VL  LH
Sbjct: 244 LLVTTVSHCGYHL--PLLPSPEFHDYHHLKFNQCYGVLGVLDRLH 286

>gb|AAH04506.1|AAH04506 Unknown (protein for IMAGE:3838106) [Homo sapiens]
          Length = 302

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 16/45 (35%), Positives = 24/45 (52%)
 Frame = +3

Query: 297 LMVTFVCQCNFHLMSPYKEAPAFLAYHNTPQPDCAHLLVVLSTLH 431
           L++T +  C +HL  P+  +P F  YH+     C  +L VL  LH
Sbjct: 224 LIITTISHCGYHL--PFLPSPEFHDYHHLKFNQCYGVLGVLDHLH 266



EST assemble image


clone accession position
1 CM082d06_r AV392113 1 575
2 HC088f12_r AV638627 104 386




Chlamydomonas reinhardtii
Kazusa DNA Research Institute