KCC001694A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001694A_C01 KCC001694A_c01
atcagCCATTAAAGCCGTCTCAATTGAGCAACACACTTGAAGCTTCTGGAAATTGACCCT
CAGCATTCAGTTCCTCCAACGTCGCAGTCGCCATAACGATCTTTGCTCGCCGCTTGGCTT
TAACCTGATTCCTACCGCAACCTTAGTGACGTTGTGAAGCGAGTAGCCGCCGCTCAGGCC
ACAGAACTTGCCACAACCCCTGTCCCTGTACCACAACACTCCAACCCGGCGCAATTTGAT
TGGACAGATAGAAAGCGTGGTATTTAGGGCTATGGCTACTGGCATGGACCCTATCGTGGA
GGAGTTTCACGAAGCCGACCTCTTTGAGGACGACAACGGCGATGCGGCTTCTTCTGTAAG
CAGCGAGGAGGATATCGCTCTAGAGGAAGCGCAGGACGGTGTTGGGCCACTTCCAAACGA
AGCGCACGATGACCCAGACACTTCATCGGCCAAGTCTAGCCTCATCCAGGTGACCCTAGC
ATCCGAGCAGCTTGACGATGCGCCGCACACGTTTGCGCGGATATCCGCATCCATGCCCGC
GATGTCGGGGGCCATACGCTTGGGCTCCTCGTGCCGGTCAGCTCCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001694A_C01 KCC001694A_c01
         (586 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_647392.1| ORFID:MW2575~hypothetical protein, similar to s...    38  0.091
ref|ZP_00064659.1| COG5297: Cellobiohydrolase A (1,4-beta-cellob...    38  0.12
gb|AAQ82688.1| Epa4p [Candida glabrata]                                37  0.16
gb|AAL58470.1|AF459093_1 serine-threonine rich antigen [Staphylo...    37  0.20
gb|AAQ82687.1| Epa5p [Candida glabrata]                                37  0.20

>ref|NP_647392.1| ORFID:MW2575~hypothetical protein, similar to streptococcal
            hemagglutinin protein [Staphylococcus aureus subsp.
            aureus MW2] gi|21205748|dbj|BAB96440.1| MW2575
            [Staphylococcus aureus subsp. aureus MW2]
          Length = 2275

 Score = 38.1 bits (87), Expect = 0.091
 Identities = 25/83 (30%), Positives = 43/83 (51%)
 Frame = -2

Query: 498  SSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSKR 319
            SSS S +  T   L  +D +SGS   S  +  + S + S ++S S  T  + S   S  +
Sbjct: 1920 SSSISGSNSTSTSLSTSDSMSGSVSVSTSTSLSDSISGSTSLSDSSSTSTSTSLSDSMSQ 1979

Query: 318  SAS*NSSTIGSMPVAIALNTTLS 250
            S S ++S  GS+  +I+ + ++S
Sbjct: 1980 SQSTSTSASGSLSTSISTSMSMS 2002

>ref|ZP_00064659.1| COG5297: Cellobiohydrolase A (1,4-beta-cellobiosidase A)
           [Microbulbifer degradans 2-40]
          Length = 791

 Score = 37.7 bits (86), Expect = 0.12
 Identities = 31/105 (29%), Positives = 49/105 (46%)
 Frame = -2

Query: 516 ANVCGASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASP 337
           A+  G+SSS S    +      +   + SS +S  +G T S +SS   S+S  +  + S 
Sbjct: 287 ASSSGSSSSGSSTSSSSSSSSSSGSSTSSSSSSSSTGSTSSSSSSSTSSTSSSSSSSTSS 346

Query: 336 LSSSKRSAS*NSSTIGSMPVAIALNTTLSICPIKLRRVGVLWYRD 202
            SSS  S+S  SS+  S   + + +T+ S        +G  WY D
Sbjct: 347 TSSSSSSSSSTSSSSSSSSSSSSSSTSGSGAGFDNPFIGGKWYVD 391

>gb|AAQ82688.1| Epa4p [Candida glabrata]
          Length = 1416

 Score = 37.4 bits (85), Expect = 0.16
 Identities = 27/72 (37%), Positives = 40/72 (55%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S  S P+PS +SS + SSS  +  + SP SSS 
Sbjct: 343 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSS--SSSSPSPSSSSS 400

Query: 321 RSAS*NSSTIGS 286
            S+S +SS+  S
Sbjct: 401 SSSSSSSSSSSS 412

 Score = 37.0 bits (84), Expect = 0.20
 Identities = 25/69 (36%), Positives = 39/69 (56%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S  S P+PS +SS + SSS  +  ++S  SSS 
Sbjct: 361 SSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSS 420

Query: 321 RSAS*NSST 295
            S+S +SS+
Sbjct: 421 SSSSSSSSS 429

 Score = 35.8 bits (81), Expect = 0.45
 Identities = 25/72 (34%), Positives = 38/72 (52%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S  S P+PS +SS + SSS  +  ++S  SSS 
Sbjct: 399 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSS 458

Query: 321 RSAS*NSSTIGS 286
            S+S + S   S
Sbjct: 459 SSSSSSPSPSSS 470

 Score = 35.0 bits (79), Expect = 0.77
 Identities = 27/87 (31%), Positives = 45/87 (51%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S  S  + S +SS + SSS  +  + SP SSS 
Sbjct: 379 SSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSS 438

Query: 321 RSAS*NSSTIGSMPVAIALNTTLSICP 241
            S+S +SS+  S   + + +++ S  P
Sbjct: 439 SSSSSSSSSSSSSSSSSSSSSSSSSSP 465

 Score = 34.3 bits (77), Expect = 1.3
 Identities = 25/74 (33%), Positives = 38/74 (50%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S  S  + S +SS + SSS  +  + SP SSS 
Sbjct: 413 SSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSS 472

Query: 321 RSAS*NSSTIGSMP 280
            S+S +SS+    P
Sbjct: 473 SSSSSSSSSPSIQP 486

 Score = 33.9 bits (76), Expect = 1.7
 Identities = 25/72 (34%), Positives = 39/72 (53%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S  S  +PS +SS + SSS  +  ++S  SSS 
Sbjct: 359 SSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSS 418

Query: 321 RSAS*NSSTIGS 286
            S+S +SS+  S
Sbjct: 419 SSSSSSSSSSSS 430

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 26/87 (29%), Positives = 44/87 (49%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S    P+ S +SS + SSS     ++S  SSS 
Sbjct: 345 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSPSPSSSSSSSSS 404

Query: 321 RSAS*NSSTIGSMPVAIALNTTLSICP 241
            S+S +SS+  S   + + +++ S  P
Sbjct: 405 SSSSSSSSSSSSSSSSSSSSSSSSSSP 431

 Score = 33.1 bits (74), Expect = 2.9
 Identities = 24/86 (27%), Positives = 43/86 (49%)
 Frame = -2

Query: 552 APDIAGMDADIRANVCGASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAI 373
           +P  +   +   ++   +SSS S +  +      +   S SS +S  S  + S +SS + 
Sbjct: 394 SPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSS 453

Query: 372 SSSLLTEEAASPLSSSKRSAS*NSST 295
           SSS  +  ++SP  SS  S+S +SS+
Sbjct: 454 SSSSSSSSSSSPSPSSSSSSSSSSSS 479

 Score = 32.3 bits (72), Expect = 5.0
 Identities = 24/71 (33%), Positives = 37/71 (51%)
 Frame = -2

Query: 498 SSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSKR 319
           SSS S +  +      +   S SS +S  S  + S +SS + SSS  +  ++SP  SS  
Sbjct: 378 SSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSS 437

Query: 318 SAS*NSSTIGS 286
           S+S +SS+  S
Sbjct: 438 SSSSSSSSSSS 448

 Score = 31.6 bits (70), Expect = 8.5
 Identities = 18/43 (41%), Positives = 28/43 (64%)
 Frame = -2

Query: 423 ASFGSGPTPSCASSRAISSSLLTEEAASPLSSSKRSAS*NSST 295
           +S  S P+PS +SS + SSS  +  ++S  SSS  S+S +SS+
Sbjct: 331 SSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 373

 Score = 31.6 bits (70), Expect = 8.5
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = -2

Query: 438 SGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSKRSAS*NSSTIGS 286
           S SS +S  S  + S +SS + SSS  +  ++SP  SS  S+S +SS+  S
Sbjct: 342 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSS 392

 Score = 31.6 bits (70), Expect = 8.5
 Identities = 23/72 (31%), Positives = 37/72 (50%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S    P+ S +SS + SSS  +  ++S  SSS 
Sbjct: 401 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSS 460

Query: 321 RSAS*NSSTIGS 286
            S+S + S+  S
Sbjct: 461 SSSSPSPSSSSS 472

>gb|AAL58470.1|AF459093_1 serine-threonine rich antigen [Staphylococcus aureus]
          Length = 2283

 Score = 37.0 bits (84), Expect = 0.20
 Identities = 25/83 (30%), Positives = 43/83 (51%)
 Frame = -2

Query: 498  SSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSKR 319
            SSS S +  T   L  +D +SGS   S  +  + S + S ++S S  T  + S   S  +
Sbjct: 1918 SSSISGSNSTSTSLSTSDSMSGSVSVSTSTSLSDSISGSISVSDSSSTSTSESLSDSMAQ 1977

Query: 318  SAS*NSSTIGSMPVAIALNTTLS 250
            S S ++S  GS+  +I+ + ++S
Sbjct: 1978 SQSTSTSASGSLSTSISTSMSMS 2000

 Score = 33.1 bits (74), Expect = 2.9
 Identities = 24/94 (25%), Positives = 47/94 (49%)
 Frame = -2

Query: 576  RHEEPKRMAPDIAGMDADIRANVCGASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTP 397
            R  E    +  ++G  ++  +    +S+S SD+  T M L ++  +SGS+  S  +  + 
Sbjct: 1326 RKSESLSASTSLSGSTSESESGSTSSSASQSDS--TSMSLSMSQSISGSTSTSTSTSLSD 1383

Query: 396  SCASSRAISSSLLTEEAASPLSSSKRSAS*NSST 295
            S ++S ++S+S+      S  +S   S S + ST
Sbjct: 1384 STSTSLSLSASMNQSGVDSNSASQSASTSTSIST 1417

>gb|AAQ82687.1| Epa5p [Candida glabrata]
          Length = 1218

 Score = 37.0 bits (84), Expect = 0.20
 Identities = 25/69 (36%), Positives = 39/69 (56%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S  S P+PS +SS + SSS  +  ++S  SSS 
Sbjct: 364 SSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSS 423

Query: 321 RSAS*NSST 295
            S+S +SS+
Sbjct: 424 SSSSSSSSS 432

 Score = 37.0 bits (84), Expect = 0.20
 Identities = 27/73 (36%), Positives = 41/73 (55%), Gaps = 1/73 (1%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAA-SPLSSS 325
           +SSS S +  +      +   S SS +S  S P+PS +SS + SSS  +  ++ SP SSS
Sbjct: 343 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSPSPSSSS 402

Query: 324 KRSAS*NSSTIGS 286
             S+S +SS+  S
Sbjct: 403 SSSSSSSSSSSSS 415

 Score = 35.0 bits (79), Expect = 0.77
 Identities = 22/53 (41%), Positives = 31/53 (57%)
 Frame = -2

Query: 438 SGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSKRSAS*NSSTIGSMP 280
           S SS +S  S  + S +SS + SSS  +  + SP SSS  S+S +SS+  S P
Sbjct: 344 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSP 396

 Score = 35.0 bits (79), Expect = 0.77
 Identities = 21/53 (39%), Positives = 31/53 (57%)
 Frame = -2

Query: 438 SGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSKRSAS*NSSTIGSMP 280
           S SS +S  S P+PS +SS + SSS  +  ++S   S   S+S +SS+  S P
Sbjct: 456 SSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSP 508

 Score = 34.7 bits (78), Expect = 1.0
 Identities = 23/64 (35%), Positives = 35/64 (53%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S  S P+PS +SS + SSS  +  ++S  SSS 
Sbjct: 402 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSRSSSSSSSSSSSSSSSSSSSSSSS 461

Query: 321 RSAS 310
            S+S
Sbjct: 462 SSSS 465

 Score = 33.9 bits (76), Expect = 1.7
 Identities = 25/72 (34%), Positives = 39/72 (53%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S  S  +PS +SS + SSS  +  ++S  SSS 
Sbjct: 362 SSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSS 421

Query: 321 RSAS*NSSTIGS 286
            S+S +SS+  S
Sbjct: 422 SSSSSSSSSSSS 433

 Score = 32.3 bits (72), Expect = 5.0
 Identities = 25/74 (33%), Positives = 38/74 (50%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S  S  + S +SS + SSS  +   +S  SSS 
Sbjct: 418 SSSSSSSSSSSSSSSSPSPSRSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSS 477

Query: 321 RSAS*NSSTIGSMP 280
            S+S +SS+  S P
Sbjct: 478 SSSSSSSSSSSSSP 491

 Score = 32.3 bits (72), Expect = 5.0
 Identities = 24/72 (33%), Positives = 38/72 (52%)
 Frame = -2

Query: 501 ASSSCSDARVTWMRLDLADEVSGSSCASFGSGPTPSCASSRAISSSLLTEEAASPLSSSK 322
           +SSS S +  +      +   S SS +S  S  +PS +SS + SSS  +  ++S  S S 
Sbjct: 341 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSPSPSS 400

Query: 321 RSAS*NSSTIGS 286
            S+S +SS+  S
Sbjct: 401 SSSSSSSSSSSS 412

 Score = 31.6 bits (70), Expect = 8.5
 Identities = 18/43 (41%), Positives = 28/43 (64%)
 Frame = -2

Query: 423 ASFGSGPTPSCASSRAISSSLLTEEAASPLSSSKRSAS*NSST 295
           +S  S P+PS +SS + SSS  +  ++S  SSS  S+S +SS+
Sbjct: 331 SSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 373



EST assemble image


clone accession position
1 MXL045c07_r BP095653 1 452
2 LCL012a07_r AV626594 2 465
3 LCL040e04_r AV628355 7 298
4 MXL016c10_r BP093964 10 547
5 CM082a10_r AV392094 61 587




Chlamydomonas reinhardtii
Kazusa DNA Research Institute