Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001687A_C01 KCC001687A_c01
(596 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_352232.1| similar to amino acid feature: Rod protein doma... 40 0.032
ref|ZP_00128590.1| COG0395: ABC-type sugar transport system, per... 37 0.16
ref|ZP_00021985.1| COG1049: Aconitase B [Ralstonia metallidurans] 34 1.8
emb|CAE01844.1| OSJNBa0084K11.5 [Oryza sativa (japonica cultivar... 34 1.8
emb|CAB95249.2| possible RJS/HERC2-like protein [Leishmania majo... 34 1.8
>ref|XP_352232.1| similar to amino acid feature: Rod protein domain, aa 266 .. 468;
amino acid feature: globular protein domain, aa 32 ..
265 [Homo sapiens]
Length = 317
Score = 39.7 bits (91), Expect = 0.032
Identities = 48/174 (27%), Positives = 64/174 (36%), Gaps = 5/174 (2%)
Frame = +2
Query: 11 LTFGPAHASRSLHPYTGASSSTSYIQHSTSPLPRMTIHNHKT--HNTPRTRQNLPQRWRR 184
L GP +A RS+H + +Q + L + H H + H TP+ P
Sbjct: 83 LMSGPNNAMRSIH--ISCPENQQGVQGLVTSLLQWRTHTHSSAPHLTPQPSPG-PTLMAP 139
Query: 185 TFASL*LQNCDSRLWPRASMFRPRQPAKLPRRTLSAPSKACSRSPVPGSPTHLAVLSGLH 364
S Q D WPR+ P PAK PR P+ P G PT +A L H
Sbjct: 140 LPTSHPSQAQDPHSWPRSP---PHTPAK-PRTHTHGPAPHLIPQPSLG-PTLMAPLPTSH 194
Query: 365 PRAGQ*IHAAR*CPTKTPHE*QMRPALH*KPPSHSSSCVRNM---PNSHAASMP 517
P Q H+ P TP P + P H+ + R P+ H P
Sbjct: 195 PSQAQDPHSWPCSPPHTPTNQAQDPHSRFRSPPHTPTKPRTHTQDPSPHLTPQP 248
>ref|ZP_00128590.1| COG0395: ABC-type sugar transport system, permease component
[Desulfovibrio desulfuricans G20]
Length = 447
Score = 37.4 bits (85), Expect = 0.16
Identities = 42/135 (31%), Positives = 54/135 (39%), Gaps = 11/135 (8%)
Frame = +3
Query: 150 VHARTSRSGGGAPSHHCDSKIVIRDCGRGQVCLDHANPLSCPGAPY---PRPVRRAAGRQ 320
VH R +R G HH C R V H P+SC A + PR RR AGR
Sbjct: 25 VHGRNTRLQSGHDGHH--------HCHRMAVFGLHHGPVSCGTARHIAGPRR-RRPAGRC 75
Query: 321 FLAHPPTSQFFPACTH---VPANRYTPQDDVRQ-----RPHTSNRCDRPSTKSHLAIQVA 476
T + PAC H P N V RPH + DRP + H + A
Sbjct: 76 L-----TVRLLPACGHPHAAPHNHQRHHHSVAHLAQDVRPHLCH--DRPGQRCHRTSR-A 127
Query: 477 AYVTCRTRMLQVCPG 521
A+V+ + ++C G
Sbjct: 128 AHVSDHIQGQRLCQG 142
>ref|ZP_00021985.1| COG1049: Aconitase B [Ralstonia metallidurans]
Length = 326
Score = 33.9 bits (76), Expect = 1.8
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 459 GGF*WRAGRICYSCGVFVGHHLAACIYWPARGCKPERTARW 337
GG WR GR Y VGH L A ++W + E+ RW
Sbjct: 235 GGLRWRCGR--YRLQPQVGHQLGAVVHWRRHPVRAEQAFRW 273
>emb|CAE01844.1| OSJNBa0084K11.5 [Oryza sativa (japonica cultivar-group)]
Length = 833
Score = 33.9 bits (76), Expect = 1.8
Identities = 36/117 (30%), Positives = 47/117 (39%), Gaps = 5/117 (4%)
Frame = +2
Query: 257 QPAKLPRRTLSAPSKACSRSPVPGSPTHLAVLSGLHPRAGQ*IHAAR*CPTKTPHE*QMR 436
QP++ PS + SP P S H +S LHPR+G A PT H+ +
Sbjct: 307 QPSRSSPECSPIPSPRMT-SPGPSSRVHSGSVSPLHPRSG---GMAPESPTNR-HDDGKK 361
Query: 437 PALH*KP-----PSHSSSCVRNMPNSHAASMPRLTGRRKTPCYRS*LLXKPPLLARG 592
H P SHSS N + S+PR GR + P K L+ RG
Sbjct: 362 KQTHKLPLPPLSISHSSFHPNNSTPTSPISVPRSPGRTENPPSPGSRWKKGKLIGRG 418
>emb|CAB95249.2| possible RJS/HERC2-like protein [Leishmania major]
gi|18129647|emb|CAD19412.1| possible herc2-related
protein [Leishmania major]
Length = 5636
Score = 33.9 bits (76), Expect = 1.8
Identities = 35/106 (33%), Positives = 42/106 (39%)
Frame = +2
Query: 158 QNLPQRWRRTFASL*LQNCDSRLWPRASMFRPRQPAKLPRRTLSAPSKACSRSPVPGSPT 337
+ L RWRR + +W RA ++RP Q A RR S AC+ S G T
Sbjct: 4079 EQLQGRWRRLWG----------MWQRAVVYRPLQLADSKRR--GRKSAACAGSTGKGVRT 4126
Query: 338 HLAVLSGLHPRAGQ*IHAAR*CPTKTPHE*QMRPALH*KPPSHSSS 475
L P G+ AA T T AL PPS SSS
Sbjct: 4127 AL-------PSGGRCDRAAEEVATATTAGSSAFRALFLAPPSSSSS 4165
