KCC001686A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001686A_C01 KCC001686A_c01
gcacgagacaccgtgtgcggcctggcgggcgtgtgcatggaggccgccgccgccgtgccg
ccgccggcgctgcccgccagCCTGGTTCGCATCCTGGCAGGCGTCAAGTCTCTGCACCGC
CCGCCGCCTCCGCACATGATGCTGGTGCTGGCGGCGCTGGGCGTGCCGCCGCCCAAGTCC
ATGCCGGGCATGATGGGCGGCCCCGGCGGCCCTGATGGCCACGTGCACGGCCCCGGCGGC
CACATGCACGGCCGCGACATGCAGCAGATGGGCCCCGGCAGCGGCCCCATTATGCCGTTC
GGCGGCCCCCCGCCGCACTTCTGCCTGGCCGGCGCCCTCAACGACGCCTGCGACTACTGC
AAGATGGCTGTGATCGAGGCGCACAGCCTGGTGAGCAACCCCACGGTGCAGGCCGAGGTG
GTCAACTACACACTGGCCGTGTGCGAGCAGTTCCCCTCCTTCACCACCGCGTGCAAGTCC
TACGTGGCCATGTATGCGCCGCTGGTGTTCACGCTGCTGGAGCAGTACCTGGTGCCCGAC
ACCCTGTGCGCGCAGACCGGCATGTGCCCCCCTCCGCCCGGCTCCGCCGCCCCCGCGCTG
CTGCCCTGGACCAAGCTGGACAAGGCGACCATGGACAAGTTCACCTCGCTGCAGAAGGCC
AGCGCCGCCGCTGCGCTGCAGCCGCCCACCCCGCCGCACTCGTGGGGCTGCTGGTTCCAT
GACGTCATGCGCAACGTCTACAACTTCTTCGCGCGCCTCACCGGCGGCGCCGCTGACCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001686A_C01 KCC001686A_c01
         (779 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE ...    65  9e-10
ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyc...    64  3e-09
ref|XP_317879.1| ENSANGP00000004917 [Anopheles gambiae] gi|21300...    62  1e-08
dbj|BAC87637.1| unnamed protein product [Homo sapiens]                 60  3e-08
ref|ZP_00136674.1| COG3639: ABC-type phosphate/phosphonate trans...    60  5e-08

>ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE and related proteins
           [Azotobacter vinelandii]
          Length = 1336

 Score = 65.5 bits (158), Expect = 9e-10
 Identities = 79/250 (31%), Positives = 95/250 (37%), Gaps = 24/250 (9%)
 Frame = -2

Query: 778 GQRRRR*GARRSCR--RCA*RHGTSSPTSAAGWAAAAQRRRWPSAAR*TCPWSPCPAWSR 605
           G RR    +RR  R  R A +   S P     W  A +R+R+        P  P P    
Sbjct: 128 GTRRAGPPSRRLTRQRRAAAKTRPSQPGPVTPWVRARRRQRYRPRGSGGSPHRPAPV--- 184

Query: 604 AAARGRRSRAEGGTCRSARTGCRAPGTAPAA*TPAAHTW--------PRRTCTRW*---- 461
                RR  A       ARTG R+P   PA  +P A  W        P R C        
Sbjct: 185 ---PARRPPAR------ARTGSRSPSPPPAGRSPGA--WRRTARSSPPPRPCRASVGLRC 233

Query: 460 --RRGTARTRPVCS*PPRPAPWGCSPGCAPRSQPSCSSRRRR*GRRPGRSAAGGRRTA*W 287
               G  R RP  S PP P P   +P  AP   P+ ++RR   GR P  +AA  RRT  W
Sbjct: 234 PSAAGPDRARPSDSPPPLPGPVARTPASAPPGPPA-TTRRPPAGRAPKATAASWRRTGRW 292

Query: 286 -----GRCRGPSAACRGRACGRRGRARGHQ---GRRGRPSCPAWTWAAARPAPPAPASCA 131
                G   G +A C  R+  RRG  R       R G  S  +WT       P A    A
Sbjct: 293 PCAMPGTATGRAARC-PRSPPRRGAVRSPDRTARRSGTHSNQSWT---CLNLPKATTGSA 348

Query: 130 EAAGGAET*R 101
             AG  +T R
Sbjct: 349 RRAGPRQTVR 358

 Score = 42.7 bits (99), Expect = 0.006
 Identities = 38/118 (32%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
 Frame = +3

Query: 6   RHRVRPGGRVHGGRRRRAAAGAARQPGSHPGRRQ----VSAPPAASAHDAGAGGAGRAAA 173
           R   RPG    G  RR   AG   +P + P        V   P +    AG     R   
Sbjct: 83  RRPARPGSPWSGRTRRTGLAGGGFRPAAQPDAGLQLDGVRRHPGSGTRRAGPPSR-RLTR 141

Query: 174 QVHAGHDGRPRRP*----WPRARPRRPHARPRHAADGPRQRPHYAVRRPPAALLPGRR 335
           Q  A    RP +P     W RAR RR   RPR +   P +      RRPPA    G R
Sbjct: 142 QRRAAAKTRPSQPGPVTPWVRAR-RRQRYRPRGSGGSPHRPAPVPARRPPARARTGSR 198

 Score = 37.0 bits (84), Expect = 0.35
 Identities = 47/161 (29%), Positives = 55/161 (33%), Gaps = 23/161 (14%)
 Frame = +2

Query: 278 AAAPLCRSAAPRRTSAWPAPSTTPATTARWL*SRRTAW*ATPRCRPRWS--TTHWPCASS 451
           A  P  R    RR +A   PS  P     W+ +RR       R RPR S  + H P    
Sbjct: 132 AGPPSRRLTRQRRAAAKTRPSQ-PGPVTPWVRARRRQ-----RYRPRGSGGSPHRPA--- 182

Query: 452 SPPSPPRASPTWPCMRRWCSRCWSSTWCPTPCARRPAC--APLRPAPPPPRC-------C 604
             P P R  P         +R  S +  P P  R P       R +PPP  C       C
Sbjct: 183 --PVPARRPPAR-------ARTGSRSPSPPPAGRSPGAWRRTARSSPPPRPCRASVGLRC 233

Query: 605 P---GPSWTRR---------PWTSSPRCRRPAPPLRCSRPP 691
           P   GP   R          P   +P    P PP    RPP
Sbjct: 234 PSAAGPDRARPSDSPPPLPGPVARTPASAPPGPPATTRRPP 274

>ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyces avermitilis
           MA-4680] gi|29605870|dbj|BAC69934.1| putative
           protoporphyrinogen oxidase [Streptomyces avermitilis
           MA-4680]
          Length = 474

 Score = 63.9 bits (154), Expect = 3e-09
 Identities = 71/223 (31%), Positives = 86/223 (37%), Gaps = 12/223 (5%)
 Frame = +2

Query: 8   TPCAAWRACAWRPPPPCRRRRCPPAWFASWQASSLCTARRLRT*CWCWRRWACRRPSPCR 187
           TP      C  RPPP C   R PP    SW ASS        T  W W       PSP  
Sbjct: 276 TPTPWSSPCPPRPPPSCCAPRHPPP-RPSWPASS--------TRPWRW------SPSPTA 320

Query: 188 A*WAAPAALMATCTAPAATCTAATCSRWAP--------AAAPLCRSAAPRRTSAWPAPST 343
           A    PA+  A  ++   +  A +  R +P           P C   A R        S+
Sbjct: 321 A--VGPASPKAAASSCLPSTGAPSRHRRSPPRSGAGSRTRTPTCWCCARRSGGTARRRSS 378

Query: 344 TPATTARWL*SRRTAW*ATPRCRPRWSTTHWPCASSSPPSPPRASPTWPCMRRWCSRCWS 523
              T A W  SR T    T   RP W     P AS + P+  R++P+    R W +   +
Sbjct: 379 AGTTPASWT-SRAT----TCARRPAWPPRRSPAASPAGPTACRSTPS-ATTRAWPASATT 432

Query: 524 STWCPT--PCARRPACAPLRPAPPPPRCCPGPSW--TRRPWTS 640
           S  CP     ARR   +  RPA  P R  P  SW  T R WTS
Sbjct: 433 SPSCPASPSAARRTTASASRPA-SPARTPPWSSWAATARGWTS 474

 Score = 46.2 bits (108), Expect = 6e-04
 Identities = 62/226 (27%), Positives = 74/226 (32%), Gaps = 24/226 (10%)
 Frame = -2

Query: 619 PAWSRAAARGRRSRAEGGT-----CRSARTGCRAPGTAPAA*TPAAH-----TWPRRTCT 470
           P    A +RGR  R  G +     C         P   P +     H     +WP  +  
Sbjct: 251 PGDRAAQSRGRAGRVGGWSPAVVCCTPTPWSSPCPPRPPPSCCAPRHPPPRPSWPASSTR 310

Query: 469 RW*RRGTARTRPVCS*PPRPAPWGCSPGCAPRSQPSCSSRRRR*GRRPGRSAAGGRRTA* 290
            W R   + T  V    P+ A   C P           SR RR    P RS AG R    
Sbjct: 311 PW-RWSPSPTAAVGPASPKAAASSCLPSTG------APSRHRR---SPPRSGAGSRT--- 357

Query: 289 WGRCRGPSAACRGRACGRRGRARGHQGRRGRPSCPAWTWAAARPA-PPAPASCAEAAGGA 113
               R P+  C  R  G   R R   G          T  A RPA PP  +  A  AG  
Sbjct: 358 ----RTPTCWCCARRSGGTARRRSSAGTTPASWTSRATTCARRPAWPPRRSPAASPAGPT 413

Query: 112 ET*RLPGC-----------EPGWRAAPAAARRRRPPCTRP--PGRT 14
                P              P   A+P+AARR     +RP  P RT
Sbjct: 414 ACRSTPSATTRAWPASATTSPSCPASPSAARRTTASASRPASPART 459

 Score = 37.4 bits (85), Expect = 0.27
 Identities = 47/147 (31%), Positives = 59/147 (39%), Gaps = 19/147 (12%)
 Frame = -2

Query: 733 CA*RHGTSSPTSAAGWAAAAQRR-RW-PSAAR*TCPWSP------CPAWSRAAARGRRSR 578
           CA RH    P+    W A++ R  RW PS      P SP      C   + A +R RRS 
Sbjct: 293 CAPRHPPPRPS----WPASSTRPWRWSPSPTAAVGPASPKAAASSCLPSTGAPSRHRRSP 348

Query: 577 AEGGT----------CRSARTGCRAPGTAPAA*TPAAHTWPRRTCTRW*RRGTARTRPVC 428
              G           C + R+G  A   + A  TPA+ T    TC R         RP  
Sbjct: 349 PRSGAGSRTRTPTCWCCARRSGGTARRRSSAGTTPASWTSRATTCAR---------RPAW 399

Query: 427 S*PPRPAPWGCSPG-CAPRSQPSCSSR 350
             PPR +P     G  A RS PS ++R
Sbjct: 400 --PPRRSPAASPAGPTACRSTPSATTR 424

 Score = 34.7 bits (78), Expect = 1.8
 Identities = 25/81 (30%), Positives = 31/81 (37%), Gaps = 3/81 (3%)
 Frame = +2

Query: 530 WCPTP--CARRPACAPLRPAPPPPRCCPGPSWTRRPW-TSSPRCRRPAPPLRCSRPPRRT 700
           W P    C   P  +P  P PPP  C P     R  W  SS R  R +P    +  P   
Sbjct: 268 WSPAVVCCTPTPWSSPCPPRPPPSCCAPRHPPPRPSWPASSTRPWRWSPSPTAAVGPASP 327

Query: 701 RGAAGSMTSCATSTTSSRASP 763
           + AA S      + +  R SP
Sbjct: 328 KAAASSCLPSTGAPSRHRRSP 348

 Score = 34.3 bits (77), Expect = 2.3
 Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 18/100 (18%)
 Frame = +2

Query: 515 CWSSTWCPTPCARRPACAPLRPAPPPPRCCPGPSW---TRRPWTSSP---RCRRPAPP-- 670
           C + T   +PC  RP  +   P  PPPR    PSW   + RPW  SP       PA P  
Sbjct: 274 CCTPTPWSSPCPPRPPPSCCAPRHPPPR----PSWPASSTRPWRWSPSPTAAVGPASPKA 329

Query: 671 -----LRCSRPPRR-----TRGAAGSMTSCATSTTSSRAS 760
                L  +  P R      R  AGS T   T    +R S
Sbjct: 330 AASSCLPSTGAPSRHRRSPPRSGAGSRTRTPTCWCCARRS 369

>ref|XP_317879.1| ENSANGP00000004917 [Anopheles gambiae] gi|21300834|gb|EAA12979.1|
           ENSANGP00000004917 [Anopheles gambiae str. PEST]
          Length = 257

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 56/183 (30%), Positives = 68/183 (36%)
 Frame = +2

Query: 230 APAATCTAATCSRWAPAAAPLCRSAAPRRTSAWPAPSTTPATTARWL*SRRTAW*ATPRC 409
           APA  C ++ C+R  P + P C          +P P+  PA  A             PRC
Sbjct: 81  APARCCPSSCCAR-RPRSPPFC----------FPPPAAAPARRAH----------RPPRC 119

Query: 410 RPRWSTTHWPCASSSPPSPPRASPTWPCMRRWCSRCWSSTWCPTPCARRPACAPLRPAPP 589
           R         CA ++P  P RA   W    R  +R   S   PT   R  A  P RP   
Sbjct: 120 R---------CAPAAPSPPARAFGPWRSSTRSSAR---SPQSPTAGWRSFAPTPRRP--- 164

Query: 590 PPRCCPGPSWTRRPWTSSPRCRRPAPPLRCSRPPRRTRGAAGSMTSCATSTTSSRASPAA 769
              C    S TRR   S  RCR      RCS P             CA S  S+R+ P +
Sbjct: 165 ---CTAADSGTRRTAASGTRCRGTPSGTRCSAP-----------APCAASPASARSPPVS 210

Query: 770 PLT 778
           P T
Sbjct: 211 PRT 213

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 77/248 (31%), Positives = 93/248 (37%), Gaps = 5/248 (2%)
 Frame = +2

Query: 44  PPPPCRRRRCPPAWFASWQASSLCTARRLRT*CWCWRRWACRRPSPCRA*WAAPAALMAT 223
           PP P RRR C    F++  A + C          C      RRP      +  PAA    
Sbjct: 62  PPAPARRRGCFSGDFSASAAPARC----------CPSSCCARRPRSPPFCFPPPAA---- 107

Query: 224 CTAPAATCTAATCSRWAPAA-APLCRSAAPRRTSAWPAPSTTPATTARWL*SRRTAW*AT 400
             APA         R APAA +P  R+  P R+S   +  +  + TA W      ++  T
Sbjct: 108 --APARRAHRPPRCRCAPAAPSPPARAFGPWRSSTRSSARSPQSPTAGW-----RSFAPT 160

Query: 401 PRCRPRWSTTHWPC-ASSSPPSPPRASPTWPCMRRWCSRCWSSTWC--PTPCARRPACAP 571
           PR          PC A+ S      AS T       C    S T C  P PCA  PA A 
Sbjct: 161 PR---------RPCTAADSGTRRTAASGT------RCRGTPSGTRCSAPAPCAASPASA- 204

Query: 572 LRPAPPPPRCCPGPSWTRRPWTSSPRCRRPAPPLRCS-RPPRRTRGAAGSMTSCATSTTS 748
            R  P  PR     S   RP + S      A P  CS RPP R            +ST S
Sbjct: 205 -RSPPVSPRTARSAS---RPSSRSASAPSRASPRTCSCRPPPR------------SSTVS 248

Query: 749 SRASPAAP 772
             AS +AP
Sbjct: 249 RPASCSAP 256

 Score = 50.8 bits (120), Expect = 2e-05
 Identities = 59/175 (33%), Positives = 70/175 (39%), Gaps = 7/175 (4%)
 Frame = +2

Query: 275 PAAAPLCRSAAPRRTSAWPAPSTTPATTARWL*SRRTAW*ATPRCRPRWSTTHWPCASSS 454
           PAA P  R   PR ++  P P  T +       SR  A    PR RP         A+S 
Sbjct: 9   PAAWPPRR---PRSSTDRPTPPRTASGP-----SRTPA--RPPRTRPSAPGRIRRAAASP 58

Query: 455 PPSPPRASPTWPCMRRWC-SRCWSSTWCPTPCARRPACAPLRPAPPPPRCCPGPSWT-RR 628
           PP PP      P  RR C S  +S++  P  C     CA  R    PP C P P+    R
Sbjct: 59  PPFPPA-----PARRRGCFSGDFSASAAPARCCPSSCCA--RRPRSPPFCFPPPAAAPAR 111

Query: 629 PWTSSPRCR----RPAPPLRCSRPPR-RTRGAAGSMTSCATSTTSSRASPAAPLT 778
                PRCR     P+PP R   P R  TR +A S  S      S   +P  P T
Sbjct: 112 RAHRPPRCRCAPAAPSPPARAFGPWRSSTRSSARSPQSPTAGWRSFAPTPRRPCT 166

 Score = 46.2 bits (108), Expect = 6e-04
 Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 7/156 (4%)
 Frame = +2

Query: 11  PCAAWRACAWRPPPPCRRRRCPPAW-------FASWQASSLCTARRLRT*CWCWRRWACR 169
           P AA    A RPP    R RC PA        F  W++S+  +AR  ++    WR +A  
Sbjct: 105 PAAAPARRAHRPP----RCRCAPAAPSPPARAFGPWRSSTRSSARSPQSPTAGWRSFAPT 160

Query: 170 RPSPCRA*WAAPAALMATCTAPAATCTAATCSRWAPAAAPLCRSAAPRRTSAWPAPSTTP 349
              PC A  +      A+ T    T +   CS  AP AA    + +P  +      ++ P
Sbjct: 161 PRRPCTAADSGTRRTAASGTRCRGTPSGTRCSAPAPCAASPASARSPPVSPRTARSASRP 220

Query: 350 ATTARWL*SRRTAW*ATPRCRPRWSTTHWPCASSSP 457
           ++ +    SR +    + R  PR ST   P + S+P
Sbjct: 221 SSRSASAPSRASPRTCSCRPPPRSSTVSRPASCSAP 256

 Score = 40.4 bits (93), Expect = 0.032
 Identities = 48/158 (30%), Positives = 59/158 (36%), Gaps = 1/158 (0%)
 Frame = -2

Query: 736 RCA*RHGTSSPTS-AAGWAAAAQRRRWPSAAR*TCPWSPCPAWSRAAARGRRSRAEGGTC 560
           R + R    SP S  AGW + A             P  PC A   A +  RR+ A G  C
Sbjct: 137 RSSTRSSARSPQSPTAGWRSFAPT-----------PRRPCTA---ADSGTRRTAASGTRC 182

Query: 559 RSARTGCRAPGTAPAA*TPAAHTWPRRTCTRW*RRGTARTRPVCS*PPRPAPWGCSPGCA 380
           R   +G R    AP A +PA                +AR+ PV    PR A     P   
Sbjct: 183 RGTPSGTRCSAPAPCAASPA----------------SARSPPV---SPRTARSASRPSSR 223

Query: 379 PRSQPSCSSRRRR*GRRPGRSAAGGRRTA*WGRCRGPS 266
             S PS +S R    R P RS+   R  +    C  PS
Sbjct: 224 SASAPSRASPRTCSCRPPPRSSTVSRPAS----CSAPS 257

>dbj|BAC87637.1| unnamed protein product [Homo sapiens]
          Length = 286

 Score = 60.5 bits (145), Expect = 3e-08
 Identities = 80/253 (31%), Positives = 99/253 (38%), Gaps = 7/253 (2%)
 Frame = +2

Query: 26  RACAWRPPPPCRRRRCPPAWFASWQASSLCTARRLRT*CWCWRRWACRRPSPCRA*WAAP 205
           RA   R PP    RR PP      +AS   T  R           +  RP P RA    P
Sbjct: 42  RASPTRTPPRASPRRTPP------RASPRRTPPRA----------SLTRP-PTRA----P 80

Query: 206 AALMATCTAPAATCTAATCSRWAPAAAPLCR--SAAPRRTSAWPAPSTTPATTARWL*SR 379
              M     P  T   A+ +R  P  +P     +A+P RT    +P+ TP   +     R
Sbjct: 81  PTRMPPTAPPTRTPPTASPARTPPTESPARTPPTASPARTPPRASPTRTPPRAS----PR 136

Query: 380 RTAW*ATP-RCRPRWSTTHWPCASSSPPSPPRASPTWPCMRRWCSRCWSSTWCP--TPCA 550
           RT   A+P R  PR S    P  +S   +PPRASP     +R   R       P  +P  
Sbjct: 137 RTPSTASPTRTPPRASPRRTPPRASPTRTPPRASP-----KRTPPRASPRRTPPRASPTR 191

Query: 551 RRPACAPLR--PAPPPPRCCPGPSWTRRPWTSSPRCRRPAPPLRCSRPPRRTRGAAGSMT 724
             P  +P R  P   P R  P  S TR P T SP  R P        PP  T   A + +
Sbjct: 192 APPRASPKRTPPTASPTRTPPRASPTRTPPTESP-ARTPPRASPTRTPP--TESPARTPS 248

Query: 725 SCATSTTSSRASP 763
             +T  T  RASP
Sbjct: 249 RASTRRTPPRASP 261

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 68/221 (30%), Positives = 83/221 (36%), Gaps = 6/221 (2%)
 Frame = +2

Query: 41  RPPPPCRRRRCPPAWFASWQASSLCTARRLRT*CWCWRRWACRRPSPCRA*WAAPAALMA 220
           R PP     R PP       A +  TA   RT           R SP R    A      
Sbjct: 92  RTPPTASPARTPPT---ESPARTPPTASPARTPPRASPTRTPPRASPRRTPSTASPTRTP 148

Query: 221 TCTAPAATCTAATCSRWAPAAAPLCRS--AAPRRTSAWPAPSTTPATTARWL*SRRTAW* 394
              +P  T   A+ +R  P A+P      A+PRRT    +P+  P   +     +RT   
Sbjct: 149 PRASPRRTPPRASPTRTPPRASPKRTPPRASPRRTPPRASPTRAPPRAS----PKRTPPT 204

Query: 395 ATP-RCRPRWSTTHWPCASSSPPSPPRASPTWPCMRRWCSRCWSSTWCPTPCARRPACAP 571
           A+P R  PR S T  P   S   +PPRASPT                  TP    PA  P
Sbjct: 205 ASPTRTPPRASPTRTPPTESPARTPPRASPT-----------------RTPPTESPARTP 247

Query: 572 LRPAP--PPPRCCPGPSWTRRPWTSSPRCRRP-APPLRCSR 685
            R +    PPR  P    TR P  +SP+   P A P  C R
Sbjct: 248 SRASTRRTPPRASP----TRTPPRASPKRTPPTASPTSCIR 284

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 59/159 (37%), Positives = 66/159 (41%), Gaps = 7/159 (4%)
 Frame = +2

Query: 308 PRRTSAWPAPSTTPATTARWL*S-RRTAW*ATP-RCRPRWSTTHWPCASSSPPSPPRASP 481
           P  TS    P TT  T   +  S  R    A+P R  PR S T  P  +S   +PPRASP
Sbjct: 4   PYTTSLTRTPHTTSLTRILYTTSLTRPPTRASPTRMPPRASPTRTPPRASPRRTPPRASP 63

Query: 482 TWPCMRRWCSRCWSSTWCPT--PCARRPACAPLRPAPP---PPRCCPGPSWTRRPWTSSP 646
                RR   R  S T  PT  P  R P  AP    PP   P R  P  S  R P T+SP
Sbjct: 64  -----RRTPPRA-SLTRPPTRAPPTRMPPTAPPTRTPPTASPARTPPTESPARTPPTASP 117

Query: 647 RCRRPAPPLRCSRPPRRTRGAAGSMTSCATSTTSSRASP 763
             R P        PPR +     S  S   + T  RASP
Sbjct: 118 -ARTPPRASPTRTPPRASPRRTPSTAS--PTRTPPRASP 153

 Score = 43.9 bits (102), Expect = 0.003
 Identities = 65/211 (30%), Positives = 75/211 (34%), Gaps = 6/211 (2%)
 Frame = -2

Query: 628 SPCPAWSRAAARGRRSRAEGGTCRSARTGCRAPGTAPAA*TPAAHTWPRRTCTRW*RRGT 449
           SP     RA+ R    RA      +     R P TAP   TP   +  R   T       
Sbjct: 53  SPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRTPPTASPARTPPTE----SP 108

Query: 448 ARTRPVCS*---PPRPAPWGCSPGCAPRSQPSCSSRRRR*GRRPGRSAAGGRRTA*WGRC 278
           ART P  S    PPR +P    P  +PR  PS +S  R   R      A  RRT      
Sbjct: 109 ARTPPTASPARTPPRASPTRTPPRASPRRTPSTASPTRTPPR------ASPRRTP----P 158

Query: 277 RGPSAACRGRACGRRGRARGHQGRRGRPSCPAWTWAAARPAP---PAPASCAEAAGGAET 107
           R        RA  +R   R    R    + P  T A  R +P   P  AS       A  
Sbjct: 159 RASPTRTPPRASPKRTPPRASPRRTPPRASP--TRAPPRASPKRTPPTASPTRTPPRASP 216

Query: 106 *RLPGCEPGWRAAPAAARRRRPPCTRPPGRT 14
            R P  E   R  P A+  R PP T  P RT
Sbjct: 217 TRTPPTESPARTPPRASPTRTPP-TESPART 246

 Score = 37.4 bits (85), Expect = 0.27
 Identities = 49/172 (28%), Positives = 56/172 (32%), Gaps = 1/172 (0%)
 Frame = -2

Query: 538 RAPGTAPAA*TPAAHTWPRRTCTRW*RRGTARTRPVCS*PPRPAPWGCSPGCAPRSQPSC 359
           R P T     TP   +  R   T    R   R  P    PPR +P    P  +PR  P  
Sbjct: 2   RTPYTTSLTRTPHTTSLTRILYTTSLTRPPTRASPTRM-PPRASPTRTPPRASPRRTPPR 60

Query: 358 SSRRRR*GRRPGRSAAGGRRTA*WGRCRGPSAACRGRACGRRGRARGHQGRRGRPSCPAW 179
           +S R    R P R++     T      R P       A   R        R      PA 
Sbjct: 61  ASPR----RTPPRASLTRPPT------RAPPTRMPPTAPPTRTPPTASPARTPPTESPAR 110

Query: 178 TWAAARPA-PPAPASCAEAAGGAET*RLPGCEPGWRAAPAAARRRRPPCTRP 26
           T   A PA  P  AS       A   R P      R  P A+ RR PP   P
Sbjct: 111 TPPTASPARTPPRASPTRTPPRASPRRTPSTASPTRTPPRASPRRTPPRASP 162

>ref|ZP_00136674.1| COG3639: ABC-type phosphate/phosphonate transport system, permease
           component [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 491

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 76/230 (33%), Positives = 85/230 (36%), Gaps = 13/230 (5%)
 Frame = +3

Query: 51  RRAAAGAARQPGSHPGRRQVSAPPAASAHDAGAG---GAGRAAAQVHAGHD-GRPRRP*W 218
           RR A GA R+    P R     PP A+A    AG   G GR    V A  + G+P     
Sbjct: 12  RRGALGAIRRRPPTPARAHRPGPPGAAAAATAAGGQRGTGRTPRPVAAVEEPGQPGLSAG 71

Query: 219 PRARPRRPHARPRHAADGPRQRPHYAVRRPPAA------LLPGRR--PQRRLRLLQDGCD 374
           PR RPRR           P  RP  A RRP AA       LP RR  P+RR  L      
Sbjct: 72  PRRRPRRAATPGSRRQAVPALRP--AFRRPVAAGRHRPGALPARRADPRRRTGLGHGPSA 129

Query: 375 RGAQPG-EQPHGAGRGGQLHTGRVRAVPLLHHRVQVLRGHVCAAGVHAAGAVPGARHPVR 551
           R   PG  QP G          R R  P          G     G   A   PG R P R
Sbjct: 130 RRPYPGPAQPRGR---------RARQHP---------AGQPARGGPGVATLPPGDR-PAR 170

Query: 552 ADRHVPPSARLRRPRAAALDQAGQGDHGQVHLAAEGQRRRCAAAAHPAAL 701
               + P+ R  RPR A      +   G+      GQR R    AHP  L
Sbjct: 171 RTHRLRPARRRSRPRRAGRPLRQRTTAGRAR--QPGQRTR--RGAHPTML 216

 Score = 36.6 bits (83), Expect = 0.46
 Identities = 37/91 (40%), Positives = 41/91 (44%), Gaps = 7/91 (7%)
 Frame = -2

Query: 262 ACRGRACGRRGRARGHQGR-RGRPSCPAWTWAAARPAPPAPASCAEAAGGAE-T*RLPGC 89
           A + R C  R   RG  G  R RP  PA    A RP PP  A+ A AAGG   T R P  
Sbjct: 2   AAQRRPC--RTARRGALGAIRRRPPTPA---RAHRPGPPGAAAAATAAGGQRGTGRTPRP 56

Query: 88  -----EPGWRAAPAAARRRRPPCTRPPGRTR 11
                EPG +   +A  RRRP     PG  R
Sbjct: 57  VAAVEEPG-QPGLSAGPRRRPRRAATPGSRR 86

 Score = 35.4 bits (80), Expect = 1.0
 Identities = 55/171 (32%), Positives = 63/171 (36%), Gaps = 7/171 (4%)
 Frame = -2

Query: 685 AAAAQRRRWPSAAR*TCPWSPCPAWSRAAARGRRSRAEGGTCRSAR--TGCRAPGTAPAA 512
           A  A RRR P+ AR   P  P  A +  AA G+R     GT R+ R       PG     
Sbjct: 15  ALGAIRRRPPTPARAHRPGPPGAAAAATAAGGQR-----GTGRTPRPVAAVEEPG----- 64

Query: 511 *TPAAHTWPRRTCTRW*RRGTARTRPVCS*PPRPAPWGCSPGCAPRSQPSCSSRRRR*GR 332
             P     PRR   R    G+ R                 P   P  +   ++ R R G 
Sbjct: 65  -QPGLSAGPRRRPRRAATPGSRRQ--------------AVPALRPAFRRPVAAGRHRPGA 109

Query: 331 RPGRSAAGGRRTA*WGRCRGPSA--ACRGRACGRRGRARGH---QGRRGRP 194
            P R A   RRT   G   GPSA     G A  R  RAR H   Q  RG P
Sbjct: 110 LPARRADPRRRT---GLGHGPSARRPYPGPAQPRGRRARQHPAGQPARGGP 157



EST assemble image


clone accession position
1 CM080c02_r AV392022 1 579
2 HC086d02_r AV638435 378 779




Chlamydomonas reinhardtii
Kazusa DNA Research Institute