Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001677A_C01 KCC001677A_c01
(557 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK83145.1|AF325500_2 fibroin [Antheraea yamamai] 46 4e-04
ref|XP_289188.1| hypothetical protein XP_289188 [Mus musculus] 45 7e-04
ref|XP_227140.2| similar to hypothetical protein FLJ12661 [Rattu... 44 0.001
ref|NP_033151.1| spinocerebellar ataxia 2 homolog; ataxin 2; spi... 42 0.006
gb|AAN28165.1| fibroin [Antheraea mylitta] 42 0.007
>gb|AAK83145.1|AF325500_2 fibroin [Antheraea yamamai]
Length = 2655
Score = 45.8 bits (107), Expect = 4e-04
Identities = 42/125 (33%), Positives = 48/125 (37%), Gaps = 12/125 (9%)
Frame = +1
Query: 187 GLGRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLG 366
G GRG SG A AAAAAAA G GR+ G AA ++AA + G G G
Sbjct: 2307 GYGRGDSGYGSGSSAAAAAAAAAAARRAGHGRSSGSAAAAAAAAAAAAASGAGGSGGGYG 2366
Query: 367 WN-ACDGMDWVVRGTCAPAGASMEVRGHS-----------RLPHTAVARLAQARVGGSTA 510
W+ G D A A A+ G S A A A A GS A
Sbjct: 2367 WDYGSYGSDSAAAAAAAAAAAASSGAGGSGGGYGWDYGGYGSDSAAAAAAAAAAAAGSGA 2426
Query: 511 LGFDG 525
G G
Sbjct: 2427 GGSGG 2431
Score = 39.3 bits (90), Expect = 0.036
Identities = 39/139 (28%), Positives = 49/139 (35%), Gaps = 11/139 (7%)
Frame = +1
Query: 142 APKLGSRAPVGLRVRGLGRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPGGA-------- 297
A + A G G+G G+ G AAAAAAA AA +G GGA
Sbjct: 1972 AAAAAAAAAAGSGAGGVGGGYGWGDGGYGSDSAAAAAAAAAAAAAGSGAGGAGGGYGWGD 2031
Query: 298 ---ARSSAALGWCHRAMCLGQSSGLGWNACDGMDWVVRGTCAPAGASMEVRGHSRLPHTA 468
SAA A G +G + G A A A+ GH R +A
Sbjct: 2032 GGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSSAAAAAAAAAAAARRAGHDRAAGSA 2091
Query: 469 VARLAQARVGGSTALGFDG 525
A A A ++ G G
Sbjct: 2092 AAAAAAAAAAAASGAGRSG 2110
Score = 38.1 bits (87), Expect = 0.081
Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 7/103 (6%)
Frame = +1
Query: 238 AAAAAAAPAACGSGRT-------PGGAARSSAALGWCHRAMCLGQSSGLGWNACDGMDWV 396
AAAAAAA AA G+G + GG SAA A G +G + G
Sbjct: 562 AAAAAAAAAASGAGGSGGGYGWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSS 621
Query: 397 VRGTCAPAGASMEVRGHSRLPHTAVARLAQARVGGSTALGFDG 525
A A A+ GH R +A A A A S A G G
Sbjct: 622 AAAAAAAAAAAARRAGHDRAAGSAAAAAAAAAAAASGAGGSGG 664
Score = 37.7 bits (86), Expect = 0.11
Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 7/103 (6%)
Frame = +1
Query: 238 AAAAAAAPAACGSGRT-------PGGAARSSAALGWCHRAMCLGQSSGLGWNACDGMDWV 396
AAAAAAA AA G+G + GG SAA A G +G + G
Sbjct: 867 AAAAAAAAAASGAGGSGGGYGWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSS 926
Query: 397 VRGTCAPAGASMEVRGHSRLPHTAVARLAQARVGGSTALGFDG 525
A A A+ GH R +A A A A ++ G G
Sbjct: 927 AAAAAAAAAAAARRAGHDRAAGSAAAAAAAAAAAAASGAGGSG 969
Score = 37.7 bits (86), Expect = 0.11
Identities = 40/120 (33%), Positives = 46/120 (38%), Gaps = 9/120 (7%)
Frame = +1
Query: 193 GRGFVRM*SGLQLAMAAAAAAAPA-ACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLGW 369
GRG SG A AAAAAAA A G R G AA ++AA + G G GW
Sbjct: 1415 GRGDGGYGSGSSAAAAAAAAAAAARRAGYDRAAGSAAAAAAAAAAAAASGAGGSGGGYGW 1474
Query: 370 -NACDGMDWVVRGTCAPAGASME-------VRGHSRLPHTAVARLAQARVGGSTALGFDG 525
+ G D A A A+ G+ A A A A GS A G G
Sbjct: 1475 GDGGYGSDSAAAAAAAAAAAAASGAGGAGGYGGYGSDSAAAAAAAAAAAAAGSGAGGAGG 1534
Score = 37.7 bits (86), Expect = 0.11
Identities = 40/120 (33%), Positives = 46/120 (38%), Gaps = 9/120 (7%)
Frame = +1
Query: 193 GRGFVRM*SGLQLAMAAAAAAAPA-ACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLGW 369
GRG SG A AAAAAAA A G R G AA ++AA + G G GW
Sbjct: 1565 GRGDGGYGSGSSAAAAAAAAAAAARRAGYDRAAGSAAAAAAAAAAAAASGAGGSGGGYGW 1624
Query: 370 -NACDGMDWVVRGTCAPAGASME-------VRGHSRLPHTAVARLAQARVGGSTALGFDG 525
+ G D A A A+ G+ A A A A GS A G G
Sbjct: 1625 GDGGYGSDSAAAAAAAAAAAAASGAGGAGGYGGYGSDSAAAAAAAAAAAAAGSGAGGAGG 1684
Score = 37.4 bits (85), Expect = 0.14
Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Frame = +1
Query: 238 AAAAAAAPAACGSGRT-------PGGAARSSAALGWCHRAMCLGQSSGLGWNACDGMDWV 396
AAAAAAA AA G+G GG SAA A G +G + G
Sbjct: 1852 AAAAAAAAAASGAGGAGGGYGWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSS 1911
Query: 397 VRGTCAPAGASMEVRGHSRLPHTAVARLAQARVGGSTALGFDG 525
A A A+ GH R +A A A A ++ G G
Sbjct: 1912 AAAAAAAAAAAARRAGHDRAAGSAAAAAAAAAAAAASGAGGSG 1954
Score = 37.4 bits (85), Expect = 0.14
Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Frame = +1
Query: 238 AAAAAAAPAACGSGRT-------PGGAARSSAALGWCHRAMCLGQSSGLGWNACDGMDWV 396
AAAAAAA AA G+G GG SAA A G +G + G
Sbjct: 1020 AAAAAAAAAASGAGGAGGGYGWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSS 1079
Query: 397 VRGTCAPAGASMEVRGHSRLPHTAVARLAQARVGGSTALGFDG 525
A A A+ GH R +A A A A ++ G G
Sbjct: 1080 AAAAAAAAAAAARRAGHDRAAGSAAAAAAAAAAAAASGAGGSG 1122
Score = 37.4 bits (85), Expect = 0.14
Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Frame = +1
Query: 238 AAAAAAAPAACGSGRT-------PGGAARSSAALGWCHRAMCLGQSSGLGWNACDGMDWV 396
AAAAAAA AA G+G GG SAA A G +G + G
Sbjct: 714 AAAAAAAAAASGAGGAGGGYGWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSS 773
Query: 397 VRGTCAPAGASMEVRGHSRLPHTAVARLAQARVGGSTALGFDG 525
A A A+ GH R +A A A A ++ G G
Sbjct: 774 AAAAAAAAAAAARRAGHDRAAGSAAAAAAAAAAAAASGAGGSG 816
Score = 37.0 bits (84), Expect = 0.18
Identities = 39/117 (33%), Positives = 46/117 (38%), Gaps = 19/117 (16%)
Frame = +1
Query: 232 AMAAAAAAAPAACGSGRTPGG-------------AARSSAALGWCHRAMCLGQSSGLGW- 369
A AAAAAAA AA G+GR+ GG AA ++AA + G G GW
Sbjct: 2092 AAAAAAAAAAAASGAGRSGGGYGWGDGGYSSDSAAAAAAAAAAAAAGSGAGGVGGGYGWG 2151
Query: 370 NACDGMDWVVRGTCAP-----AGASMEVRGHSRLPHTAVARLAQARVGGSTALGFDG 525
+ G D A AG S G+ A A A A GS A G G
Sbjct: 2152 DGGYGSDSAAAAAAAAAAASGAGGSGGYGGYGSDSAAAAAAAAAAAAAGSGAGGVGG 2208
Score = 37.0 bits (84), Expect = 0.18
Identities = 55/191 (28%), Positives = 62/191 (31%), Gaps = 23/191 (12%)
Frame = +1
Query: 40 STGNAWLSVSHVRPCRFGGHECRSVERTPAWR*RAPKLGSRAPVGLRVRGLGRGFVRM*S 219
S+ A + + R GHE + A A + A G G G G+
Sbjct: 466 SSAAAAAAAAAAAAARQAGHERAAGSAAAA----AAAAAAAAASGAGGSGRGYGWGDGGY 521
Query: 220 GLQLAMAAAAAAAPAACGSGR---------TPGGAARSSAALGWCHRAMCL---GQSSGL 363
G A AAAAAAA AA GSG GG SAA A G G
Sbjct: 522 GSDSAAAAAAAAAAAAAGSGAGGAGGDYGWGDGGYGSDSAAAAAAAAAAASGAGGSGGGY 581
Query: 364 GWN----ACDGMDWVVRGTCAPAGASMEVR-------GHSRLPHTAVARLAQARVGGSTA 510
GW D A AG+ R G S A A A R G A
Sbjct: 582 GWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSSAAAAAAAAAAAARRAGHDRA 641
Query: 511 LGFDGLTAAAA 543
G AAAA
Sbjct: 642 AGSAAAAAAAA 652
Score = 37.0 bits (84), Expect = 0.18
Identities = 42/132 (31%), Positives = 50/132 (37%), Gaps = 21/132 (15%)
Frame = +1
Query: 193 GRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPGG-------------AARSSAALGWCHR 333
GRG SG A AAAAAAA AA G+G + GG AA ++AA
Sbjct: 1253 GRGDGGYGSGSSAAAAAAAAAAAAASGAGGSGGGYGWGDGGYGSGSAAAAAAAAAAAAAG 1312
Query: 334 AMCLGQSSGLGW-NACDGMDWVVRGTCAPAGASME-------VRGHSRLPHTAVARLAQA 489
+ G G GW + G D A A A+ G+ A A A A
Sbjct: 1313 SGAGGVGGGYGWGDGGYGSDSAAAAAAAAAAAAASGAGGAGGYGGYGSDSAAAAAAAAAA 1372
Query: 490 RVGGSTALGFDG 525
GS A G G
Sbjct: 1373 AAAGSGAGGAGG 1384
Score = 36.2 bits (82), Expect = 0.31
Identities = 31/104 (29%), Positives = 40/104 (37%), Gaps = 8/104 (7%)
Frame = +1
Query: 238 AAAAAAAPAACGSGRTPGG--------AARSSAALGWCHRAMCLGQSSGLGWNACDGMDW 393
AAAAAAA AA G+G + GG + S+AA A + G G
Sbjct: 408 AAAAAAAAAASGAGGSGGGYGWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSS 467
Query: 394 VVRGTCAPAGASMEVRGHSRLPHTAVARLAQARVGGSTALGFDG 525
A A A+ GH R +A A A A ++ G G
Sbjct: 468 AAAAAAAAAAAAARQAGHERAAGSAAAAAAAAAAAAASGAGGSG 511
Score = 36.2 bits (82), Expect = 0.31
Identities = 31/97 (31%), Positives = 37/97 (37%), Gaps = 1/97 (1%)
Frame = +1
Query: 142 APKLGSRAPVGLRVRGLGRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPGGAARSSAALG 321
A + A G G G G S A AAAAAAA G R G AA ++AA
Sbjct: 441 AAAAAAAAAAGSGAGGRGDGGYGSGSSAAAAAAAAAAAAARQAGHERAAGSAAAAAAAAA 500
Query: 322 WCHRAMCLGQSSGLGW-NACDGMDWVVRGTCAPAGAS 429
+ G G GW + G D A A A+
Sbjct: 501 AAAASGAGGSGRGYGWGDGGYGSDSAAAAAAAAAAAA 537
Score = 35.8 bits (81), Expect = 0.40
Identities = 38/122 (31%), Positives = 47/122 (38%)
Frame = +1
Query: 187 GLGRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLG 366
G G G S A AAAAAAA A G+G G + S+AA A G +G
Sbjct: 1623 GWGDGGYGSDSAAAAAAAAAAAAASGAGGAGGYGGYGSDSAAAAAAAAAAAAAGSGAG-- 1680
Query: 367 WNACDGMDWVVRGTCAPAGASMEVRGHSRLPHTAVARLAQARVGGSTALGFDGLTAAAAI 546
A G W G + + A+ + A R GS+A AAAA
Sbjct: 1681 -GAGGGYGWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSSAAAAAAAAAAAAA 1739
Query: 547 RR 552
RR
Sbjct: 1740 RR 1741
Score = 35.4 bits (80), Expect = 0.52
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 193 GRGFVRM*SGLQLAMAAAAAAAPA-ACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLGW 369
GRG SG A AAAAAAA A G R G AA ++AA + G G GW
Sbjct: 915 GRGDGGYGSGSSAAAAAAAAAAAARRAGHDRAAGSAAAAAAAAAAAAASGAGGSGGGYGW 974
Query: 370 -NACDGMDWVVRGTCAPAGAS 429
+ G D A A A+
Sbjct: 975 GDGGYGSDSAAAAAAAAAAAA 995
Score = 35.4 bits (80), Expect = 0.52
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 193 GRGFVRM*SGLQLAMAAAAAAAPA-ACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLGW 369
GRG SG A AAAAAAA A G R G AA ++AA + G G GW
Sbjct: 762 GRGDGGYGSGSSAAAAAAAAAAAARRAGHDRAAGSAAAAAAAAAAAAASGAGGSGGGYGW 821
Query: 370 -NACDGMDWVVRGTCAPAGAS 429
+ G D A A A+
Sbjct: 822 GDGGYGSDSAAAAAAAAAAAA 842
Score = 35.4 bits (80), Expect = 0.52
Identities = 41/125 (32%), Positives = 45/125 (35%), Gaps = 23/125 (18%)
Frame = +1
Query: 238 AAAAAAAPAACGSGRTPGG------------AARSSAALGWCHRAMCLGQSSGLGWN--- 372
AAAAAAA AA G+G T GG AA ++AA A G G GW
Sbjct: 1820 AAAAAAAAAASGAGGTGGGYGWGDGGYGSDSAAAAAAAAAAASGAG--GAGGGYGWGDGG 1877
Query: 373 -ACDGMDWVVRGTCAPAGASMEVR-------GHSRLPHTAVARLAQARVGGSTALGFDGL 528
D A AG+ R G S A A A R G A G
Sbjct: 1878 YGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSSAAAAAAAAAAAARRAGHDRAAGSAAA 1937
Query: 529 TAAAA 543
AAAA
Sbjct: 1938 AAAAA 1942
Score = 35.4 bits (80), Expect = 0.52
Identities = 38/118 (32%), Positives = 44/118 (37%), Gaps = 1/118 (0%)
Frame = +1
Query: 193 GRGFVRM*SGLQLAMAAAAAAAPA-ACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLGW 369
GRG SG A AAAAAAA A G R G AA ++AA + G G GW
Sbjct: 1900 GRGDGGYGSGSSAAAAAAAAAAAARRAGHDRAAGSAAAAAAAAAAAAASGAGGSGGGYGW 1959
Query: 370 NACDGMDWVVRGTCAPAGASMEVRGHSRLPHTAVARLAQARVGGSTALGFDGLTAAAA 543
DG A A A+ G + + G G D AAAA
Sbjct: 1960 G--DGGYGSNSAAAAAAAAAAAAAG------SGAGGVGGGYGWGDGGYGSDSAAAAAA 2009
Score = 35.4 bits (80), Expect = 0.52
Identities = 42/135 (31%), Positives = 48/135 (35%), Gaps = 16/135 (11%)
Frame = +1
Query: 187 GLGRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPGGAARSSAALGWCHRAMCLGQSS--- 357
G G G S A AAAAAAA A G+G G + S+AA A G +
Sbjct: 1473 GWGDGGYGSDSAAAAAAAAAAAAASGAGGAGGYGGYGSDSAAAAAAAAAAAAAGSGAGGA 1532
Query: 358 --GLGW-NACDGMDWVVRGTCAPAGASME----------VRGHSRLPHTAVARLAQARVG 498
G GW + G D A A A+ G S A A A R G
Sbjct: 1533 GGGYGWGDGGYGSDSAAAAAAAAAAAAASGAGGRGDGGYGSGSSAAAAAAAAAAAARRAG 1592
Query: 499 GSTALGFDGLTAAAA 543
A G AAAA
Sbjct: 1593 YDRAAGSAAAAAAAA 1607
Score = 35.4 bits (80), Expect = 0.52
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 193 GRGFVRM*SGLQLAMAAAAAAAPA-ACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLGW 369
GRG SG A AAAAAAA A G R G AA ++AA + G G GW
Sbjct: 1068 GRGDGGYGSGSSAAAAAAAAAAAARRAGHDRAAGSAAAAAAAAAAAAASGAGGSGGGYGW 1127
Query: 370 -NACDGMDWVVRGTCAPAGAS 429
+ G D A A A+
Sbjct: 1128 GDGGYGSDSAAAAAAAAAAAA 1148
Score = 35.4 bits (80), Expect = 0.52
Identities = 42/135 (31%), Positives = 48/135 (35%), Gaps = 16/135 (11%)
Frame = +1
Query: 187 GLGRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPGGAARSSAALGWCHRAMCLGQSS--- 357
G G G S A AAAAAAA A G+G G + S+AA A G +
Sbjct: 1323 GWGDGGYGSDSAAAAAAAAAAAAASGAGGAGGYGGYGSDSAAAAAAAAAAAAAGSGAGGA 1382
Query: 358 --GLGW-NACDGMDWVVRGTCAPAGASME----------VRGHSRLPHTAVARLAQARVG 498
G GW + G D A A A+ G S A A A R G
Sbjct: 1383 GGGYGWGDGGYGSDSAAAAAAAAAAAAASGAGGRGDGGYGSGSSAAAAAAAAAAAARRAG 1442
Query: 499 GSTALGFDGLTAAAA 543
A G AAAA
Sbjct: 1443 YDRAAGSAAAAAAAA 1457
Score = 35.0 bits (79), Expect = 0.68
Identities = 42/131 (32%), Positives = 43/131 (32%), Gaps = 23/131 (17%)
Frame = +1
Query: 220 GLQLAMAAAAAAAPAACGSGR---------TPGGAARSSAALGWCHRAMCL---GQSSGL 363
G A AAAAAAA AA GSG GG SAA A G G
Sbjct: 827 GSDSAAAAAAAAAAAAAGSGAGGAGGDYGWGDGGYGSDSAAAAAAAAAAASGAGGSGGGY 886
Query: 364 GWN----ACDGMDWVVRGTCAPAGASMEVR-------GHSRLPHTAVARLAQARVGGSTA 510
GW D A AG+ R G S A A A R G A
Sbjct: 887 GWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSSAAAAAAAAAAAARRAGHDRA 946
Query: 511 LGFDGLTAAAA 543
G AAAA
Sbjct: 947 AGSAAAAAAAA 957
Score = 35.0 bits (79), Expect = 0.68
Identities = 43/143 (30%), Positives = 48/143 (33%), Gaps = 24/143 (16%)
Frame = +1
Query: 187 GLGRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPGG-------------AARSSAALGWC 327
G G G S A AAAAAAA A G+G GG AA ++AA
Sbjct: 1956 GYGWGDGGYGSNSAAAAAAAAAAAAAGSGAGGVGGGYGWGDGGYGSDSAAAAAAAAAAAA 2015
Query: 328 HRAMCLGQSSGLGWN----ACDGMDWVVRGTCAPAGASMEVR-------GHSRLPHTAVA 474
+ G G GW D A AG+ R G S A A
Sbjct: 2016 AGSGAGGAGGGYGWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSSAAAAAAAA 2075
Query: 475 RLAQARVGGSTALGFDGLTAAAA 543
A R G A G AAAA
Sbjct: 2076 AAAARRAGHDRAAGSAAAAAAAA 2098
Score = 35.0 bits (79), Expect = 0.68
Identities = 40/139 (28%), Positives = 49/139 (34%), Gaps = 5/139 (3%)
Frame = +1
Query: 142 APKLGSRAPVGLRVRGLGRGFVRM*SGLQLAMAAAAAAAPAA-----CGSGRTPGGAARS 306
A + A G G+G G+ G +AAAAAA AA G R G AA +
Sbjct: 250 AAAAAAAAAAGSGAGGVGGGYGGGDGGYGSGSSAAAAAAAAAAAARRAGHDRAAGSAAAA 309
Query: 307 SAALGWCHRAMCLGQSSGLGWNACDGMDWVVRGTCAPAGASMEVRGHSRLPHTAVARLAQ 486
+AA + G G GW DG A A A+ G + R
Sbjct: 310 AAAAAAAAASGAGGSGGGYGWG--DGGYGSDSAAAAAAAAAAAAAG------SGAGRAGG 361
Query: 487 ARVGGSTALGFDGLTAAAA 543
G G D AAAA
Sbjct: 362 DYGWGDGGYGSDSAAAAAA 380
Score = 34.7 bits (78), Expect = 0.89
Identities = 42/131 (32%), Positives = 43/131 (32%), Gaps = 23/131 (17%)
Frame = +1
Query: 220 GLQLAMAAAAAAAPAACGSGR---------TPGGAARSSAALGWCHRAMCL---GQSSGL 363
G A AAAAAAA AA GSG GG SAA A G G
Sbjct: 980 GSDSAAAAAAAAAAAAAGSGAGGAGGDYGWGDGGYGSDSAAAAAAAAAAASGAGGAGGGY 1039
Query: 364 GWN----ACDGMDWVVRGTCAPAGASMEVR-------GHSRLPHTAVARLAQARVGGSTA 510
GW D A AG+ R G S A A A R G A
Sbjct: 1040 GWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSSAAAAAAAAAAAARRAGHDRA 1099
Query: 511 LGFDGLTAAAA 543
G AAAA
Sbjct: 1100 AGSAAAAAAAA 1110
Score = 34.7 bits (78), Expect = 0.89
Identities = 42/131 (32%), Positives = 43/131 (32%), Gaps = 23/131 (17%)
Frame = +1
Query: 220 GLQLAMAAAAAAAPAACGSGR---------TPGGAARSSAALGWCHRAMCL---GQSSGL 363
G A AAAAAAA AA GSG GG SAA A G G
Sbjct: 674 GSDSAAAAAAAAAAAAAGSGAGGAGGDYGWGDGGYGSDSAAAAAAAAAAASGAGGAGGGY 733
Query: 364 GWN----ACDGMDWVVRGTCAPAGASMEVR-------GHSRLPHTAVARLAQARVGGSTA 510
GW D A AG+ R G S A A A R G A
Sbjct: 734 GWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSSAAAAAAAAAAAARRAGHDRA 793
Query: 511 LGFDGLTAAAA 543
G AAAA
Sbjct: 794 AGSAAAAAAAA 804
Score = 33.5 bits (75), Expect = 2.0
Identities = 36/122 (29%), Positives = 43/122 (34%), Gaps = 9/122 (7%)
Frame = +1
Query: 187 GLGRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPG-----GAARSSAALGWCHRAMCLGQ 351
G G G S A AAAAAAA A G+G G AA ++AA + G
Sbjct: 1161 GWGDGGYGSDSAAAAAAAAAAAAASGAGGAGGYGGYGSDSAAAAAAAAAAAAASSGAGGA 1220
Query: 352 SSGLGWN----ACDGMDWVVRGTCAPAGASMEVRGHSRLPHTAVARLAQARVGGSTALGF 519
G GW D A AG+ RG + A A A + A G
Sbjct: 1221 GGGYGWGDGGYGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSSAAAAAAAAAAAAASGA 1280
Query: 520 DG 525
G
Sbjct: 1281 GG 1282
Score = 33.5 bits (75), Expect = 2.0
Identities = 44/143 (30%), Positives = 52/143 (35%), Gaps = 15/143 (10%)
Frame = +1
Query: 142 APKLGSRAPVGLRVRGLGRGFVRM*SGLQLAMAAAAAAAPAAC----GSGRTPGGAARSS 309
A + A G G+G G+ G AAAAAAA AA GSG G + S+
Sbjct: 2128 AAAAAAAAAAGSGAGGVGGGYGWGDGGYGSDSAAAAAAAAAAASGAGGSGGYGGYGSDSA 2187
Query: 310 AALGWCHRAMCLGQSS-----GLGW-NACDGMDWVVRGTCAP-----AGASMEVRGHSRL 456
AA A G + G GW + G D A AG S G+
Sbjct: 2188 AAAAAAAAAAAAGSGAGGVGGGYGWGDGGYGSDSAAAAAAAAAAASGAGGSGGYGGYGSD 2247
Query: 457 PHTAVARLAQARVGGSTALGFDG 525
A A A A GS A G G
Sbjct: 2248 SAAAAAAAAAAAAAGSGAGGVGG 2270
Score = 33.1 bits (74), Expect = 2.6
Identities = 30/102 (29%), Positives = 37/102 (35%)
Frame = +1
Query: 220 GLQLAMAAAAAAAPAACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLGWNACDGMDWVV 399
G A AAAAAAA A G+G GG R + G G S+
Sbjct: 2283 GSDSAAAAAAAAAAAGSGAGGVGGGYGRGDSGYG-------SGSSA-------------- 2321
Query: 400 RGTCAPAGASMEVRGHSRLPHTAVARLAQARVGGSTALGFDG 525
A A A+ GH R +A A A A ++ G G
Sbjct: 2322 -AAAAAAAAAARRAGHGRSSGSAAAAAAAAAAAAASGAGGSG 2362
Score = 32.7 bits (73), Expect = 3.4
Identities = 37/112 (33%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Frame = +1
Query: 193 GRGFVRM*SGLQLAMAAAAAAAPA-ACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLGW 369
GRG SG A AAAAAAA A G R G AA ++AA + G GW
Sbjct: 2056 GRGDGGYGSGSSAAAAAAAAAAAARRAGHDRAAGSAAAAAAAAAAAAASGAGRSGGGYGW 2115
Query: 370 NACDGMDWVVRGTCAPAGASMEVRGHSRLPHTAVARLAQARVGGSTALGFDG 525
DG G+S A A A A GS A G G
Sbjct: 2116 G--DG-------------------GYSSDSAAAAAAAAAAAAAGSGAGGVGG 2146
Score = 32.3 bits (72), Expect = 4.4
Identities = 27/80 (33%), Positives = 33/80 (40%), Gaps = 1/80 (1%)
Frame = +1
Query: 193 GRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLGW- 369
GRG SG A AAAAAAA A G+A ++AA + G G GW
Sbjct: 610 GRGDGGYGSGSSAAAAAAAAAAAARRAGHDRAAGSAAAAAAAAAAAASGAGGSGGGYGWG 669
Query: 370 NACDGMDWVVRGTCAPAGAS 429
+ G D A A A+
Sbjct: 670 DGGYGSDSAAAAAAAAAAAA 689
Score = 32.3 bits (72), Expect = 4.4
Identities = 31/97 (31%), Positives = 37/97 (37%), Gaps = 1/97 (1%)
Frame = +1
Query: 142 APKLGSRAPVGLRVRGLGRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPGGAARSSAALG 321
A + A G G G G S A AAAAAAA G R G AA ++AA
Sbjct: 1700 AAAAAAAAAAGSGAGGRGDGGYGSGSSAAAAAAAAAAAAARRAGHDRAAGCAAAAAAAAA 1759
Query: 322 WCHRAMCLGQSSGLGW-NACDGMDWVVRGTCAPAGAS 429
+ G G GW + G D A A A+
Sbjct: 1760 -AAASGAGGSGGGYGWGDGGYGSDSAAAAAAAAAAAA 1795
Score = 32.0 bits (71), Expect = 5.8
Identities = 39/125 (31%), Positives = 44/125 (35%), Gaps = 23/125 (18%)
Frame = +1
Query: 238 AAAAAAAPAACGSGRTPGG------------AARSSAALGWCHRAMCLGQSSGLGWN--- 372
AAAAAAA AA G+G + GG AA ++AA A G G GW
Sbjct: 376 AAAAAAAAAASGAGGSGGGYGWGDGGYGSDSAAAAAAAAAAASGAG--GSGGGYGWGDGG 433
Query: 373 -ACDGMDWVVRGTCAPAGASMEVR-------GHSRLPHTAVARLAQARVGGSTALGFDGL 528
D A AG+ R G S A A A AR G
Sbjct: 434 YGSDSAAAAAAAAAAAAGSGAGGRGDGGYGSGSSAAAAAAAAAAAAARQAGHERAAGSAA 493
Query: 529 TAAAA 543
AAAA
Sbjct: 494 AAAAA 498
>ref|XP_289188.1| hypothetical protein XP_289188 [Mus musculus]
Length = 175
Score = 45.1 bits (105), Expect = 7e-04
Identities = 29/89 (32%), Positives = 35/89 (38%)
Frame = -1
Query: 317 RAAEDRAAPPGVRPEPHAAGAAAAAAAIASCSPLHIRTKPRPSPLTRNPTGARLPSLGAL 138
RA + R A PG RP+ A AAA+ C P P P+ P R A
Sbjct: 9 RAVQRRGARPGTRPQSQAEAGEGTAAAVQGCGPGPSEGAPGSRPVASPPAAERAL---AA 65
Query: 137 YRHAGVRSTDRHS*PPNRHGRTCDTLSHA 51
R AGVR PP TL+H+
Sbjct: 66 QRGAGVRGAPSPGLPPTALAALLPTLTHS 94
>ref|XP_227140.2| similar to hypothetical protein FLJ12661 [Rattus norvegicus]
Length = 897
Score = 44.3 bits (103), Expect = 0.001
Identities = 47/151 (31%), Positives = 61/151 (40%), Gaps = 16/151 (10%)
Frame = -1
Query: 545 IAAAAVNPSKP--------KAV---LPPTRAWANLATAVCGNL-L*PLTSMLAPAGAHVP 402
IAA + PSKP K V +PP R A +A + N L PL +++AP P
Sbjct: 178 IAARILGPSKPPPSTYNPHKPVPYPIPPCRPHATIAPSAYNNAGLVPLANVIAPGVPPPP 237
Query: 401 RTTQSMPSHAFQPKPDD*PKHMARWHQPRAAEDRAAP-PGVRPEP---HAAGAAAAAAAI 234
T + AF + H + A P P V P H + +AAA A
Sbjct: 238 PYTPNPAGAAFSTAASQ----LFSPHGSNPSTPAATPVPAVSPAKAVNHPSVSAAATGAG 293
Query: 233 ASCSPLHIRTKPRPSPLTRNPTGARLPSLGA 141
S + P P P T NPT R PS+ A
Sbjct: 294 MSAPNTPLAVFPTPQPSTPNPTVIRTPSVPA 324
>ref|NP_033151.1| spinocerebellar ataxia 2 homolog; ataxin 2; spinocerebellar ataxia
2 (olivopontocerebellar ataxia 2, autosomal dominant,
ataxin 2) [Mus musculus] gi|7513601|pir||T14171 ataxin-2
- mouse gi|3005020|gb|AAC09275.1| ataxin-2 [Mus
musculus]
Length = 1285
Score = 42.0 bits (97), Expect = 0.006
Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Frame = -1
Query: 320 PRAAEDRAAPPGVRPEPHAAGAAAAAAAIASC---------SPLHIRTKPRPSP----LT 180
P A RA PPGVR P +G +++A C PL + KP+P P
Sbjct: 106 PAATPARACPPGVRASPPRSGVSSSARPAPGCPRPACEPVYGPLTMSLKPQPQPPAPATG 165
Query: 179 RNPTGARLPSLGALYRHAGVRS 114
R P G L S GA A V S
Sbjct: 166 RKPGGGLLSSPGAAPASAAVTS 187
>gb|AAN28165.1| fibroin [Antheraea mylitta]
Length = 507
Score = 41.6 bits (96), Expect = 0.007
Identities = 37/120 (30%), Positives = 43/120 (35%), Gaps = 1/120 (0%)
Frame = +1
Query: 187 GLGRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLG 366
G G G S A AAAAAAA A+ GR GG SAA A SG G
Sbjct: 166 GRGHGGYGSDSAAAAAAAAAAAAAAASGAGGRGHGGYGSDSAAAAAAAAAAAAAAGSGAG 225
Query: 367 WNACDGMDWVVRGTCAPAGASMEVRGHSRLPHTAVARLAQARVG-GSTALGFDGLTAAAA 543
G W G + +GA+ + + G G G D AAAA
Sbjct: 226 GRGDGGYGWGDGGYGSDSGAAAAAAAAAAAAASGAGGRGDGGYGRGDGGYGSDSAAAAAA 285
Score = 34.7 bits (78), Expect = 0.89
Identities = 38/118 (32%), Positives = 43/118 (36%), Gaps = 10/118 (8%)
Frame = +1
Query: 220 GLQLAMAAAAAAAPAACGS---------GRTPGGAARSSAALGWCHRAMCLGQSSGLGWN 372
G A AAAAAAA AA GS GR GG SAA A G SG G
Sbjct: 346 GSDSAAAAAAAAAAAAAGSGAGGVGGGYGRGDGGYGSDSAAAAAAAAAAAAG--SGAGGR 403
Query: 373 ACDGMDWVVRGTCAPAGASMEVRGHSRLPHTAVARLAQARVG-GSTALGFDGLTAAAA 543
G W G + +GA+ + + G G G D AAAA
Sbjct: 404 GDGGYGWGDGGYGSDSGAAAAAAAAAAAAASGAGGRGDGGYGWGDGGYGSDPGAAAAA 461
Score = 34.7 bits (78), Expect = 0.89
Identities = 40/147 (27%), Positives = 48/147 (32%), Gaps = 13/147 (8%)
Frame = +1
Query: 142 APKLGSRAPVGLRVRGLGRGFVRM*SGLQLAMAAAAAAAPAACGSGRTPGGAARSSAALG 321
A + A G G+G G+ R G AAAAAAA AA G R G
Sbjct: 353 AAAAAAAAAAGSGAGGVGGGYGRGDGGYGSDSAAAAAAAAAAAAGS---GAGGRGDGGYG 409
Query: 322 W-------------CHRAMCLGQSSGLGWNACDGMDWVVRGTCAPAGASMEVRGHSRLPH 462
W A +SG G G W G + GA+ +
Sbjct: 410 WGDGGYGSDSGAAAAAAAAAAAAASGAGGRGDGGYGWGDGGYGSDPGAAAAAAAAA---- 465
Query: 463 TAVARLAQARVGGSTALGFDGLTAAAA 543
A A A+ R G G AAAA
Sbjct: 466 AAAASGARGRGDGGYGSGSSAAAAAAA 492
Score = 32.0 bits (71), Expect = 5.8
Identities = 24/69 (34%), Positives = 27/69 (38%)
Frame = +1
Query: 238 AAAAAAAPAACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLGWNACDGMDWVVRGTCAP 417
AAAAAAA A+ GR GG SAA A +SG G G A
Sbjct: 153 AAAAAAAAASGAGGRGHGGYGSDSAAAAAAAAAAAAAAASGAGGRGHGGYGSDSAAAAAA 212
Query: 418 AGASMEVRG 444
A A+ G
Sbjct: 213 AAAAAAAAG 221
Score = 31.6 bits (70), Expect = 7.5
Identities = 34/112 (30%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Frame = +1
Query: 232 AMAAAAAAAPAACGSGRTPGGAARSSAALGWCHRAMCLGQSSGLGWNACDGMDWVVRGTC 411
A AAAAAAA A+ GR GG R G A ++ + G VV
Sbjct: 247 AAAAAAAAAAASGAGGRGDGGYGRGDGGYGSDSAAAAAAAAAAAAGSGAGGQATVVMD-- 304
Query: 412 APAGASMEVRGHSRLPHTAVARLAQARVGGS--------TALGFDGLTAAAA 543
A + R +L A A A GGS + G D AAAA
Sbjct: 305 GAMAAMVLTRAQQQLAAAAAAASASG-AGGSGGSYEWDYGSYGSDSAAAAAA 355
