Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001671A_C01 KCC001671A_c01
(461 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAH44369.1| Similar to crooked neck protein [Danio rerio] 40 0.010
ref|NP_199411.1| CRN (crooked neck) protein [Arabidopsis thalian... 38 0.048
ref|NP_616300.1| O-linked N-acetylglucosamine transferase [Metha... 38 0.063
ref|NP_194738.1| expressed protein [Arabidopsis thaliana] gi|748... 37 0.082
ref|NP_296439.1| type III secretion chaperone, putative [Chlamyd... 37 0.11
>gb|AAH44369.1| Similar to crooked neck protein [Danio rerio]
Length = 753
Score = 40.4 bits (93), Expect = 0.010
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 206 PLVCRPEKLYEHALELA-RLEEYEDARAAFESLLTRQPQLCKAWVSYAQMEKRSHRSSHH 382
P + PE L++ ++ EEY++ R ++ LL R Q K W+SYAQ E S
Sbjct: 508 PRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRLLQRT-QHVKVWISYAQFE----LSIDT 562
Query: 383 ADRWQRCRAVLQ 418
DR QRCR V +
Sbjct: 563 EDRVQRCRQVYE 574
Score = 35.0 bits (79), Expect = 0.41
Identities = 15/54 (27%), Positives = 29/54 (52%)
Frame = +2
Query: 260 LEEYEDARAAFESLLTRQPQLCKAWVSYAQMEKRSHRSSHHADRWQRCRAVLQR 421
L+E + +R+ +E L + W+ YA+ME ++ + +H + W R +L R
Sbjct: 93 LQEVQRSRSIYERALDVDHRNITLWLKYAEMEMKNRQVNHARNIWDRAITILPR 146
>ref|NP_199411.1| CRN (crooked neck) protein [Arabidopsis thaliana]
gi|9757719|dbj|BAB08244.1| CRN (crooked neck) protein
[Arabidopsis thaliana]
Length = 673
Score = 38.1 bits (87), Expect = 0.048
Identities = 24/73 (32%), Positives = 37/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 206 PLVCRPEKLYEHALELARLE-EYEDARAAFESLLTRQPQLCKAWVSYAQMEKRSHRSSHH 382
P + PE L++ ++ E E+E RA +E LL R CK W+S+A+ E + S H
Sbjct: 507 PALDMPELLWKTYIDFEISEGEFEKTRALYERLLDRTKH-CKVWISFAKFE--ASASEHK 563
Query: 383 ADRWQRCRAVLQR 421
D + R + R
Sbjct: 564 EDGIKSARVIFDR 576
>ref|NP_616300.1| O-linked N-acetylglucosamine transferase [Methanosarcina
acetivorans str. C2A] gi|19915217|gb|AAM04780.1|
O-linked N-acetylglucosamine transferase [Methanosarcina
acetivorans str. C2A]
Length = 292
Score = 37.7 bits (86), Expect = 0.063
Identities = 24/88 (27%), Positives = 37/88 (41%), Gaps = 3/88 (3%)
Frame = +2
Query: 203 GPLVCRPEKL---YEHALELARLEEYEDARAAFESLLTRQPQLCKAWVSYAQMEKRSHRS 373
G + PE Y + L LE Y++A AFE + P KAW+ + R
Sbjct: 212 GKIKANPENARFWYNKGIALRDLERYKEALEAFEKAIDINPSFTKAWIGKGIVYDR---- 267
Query: 374 SHHADRWQRCRAVLQRGLSLNPMSSCLV 457
+ Q+ +R + +NP+ S LV
Sbjct: 268 ---VKKHQKAMEAYERAVDINPLYSDLV 292
>ref|NP_194738.1| expressed protein [Arabidopsis thaliana] gi|7486510|pir||T08985
hypothetical protein F6G3.120 - Arabidopsis thaliana
gi|4938485|emb|CAB43844.1| putative protein [Arabidopsis
thaliana] gi|7269909|emb|CAB81002.1| putative protein
[Arabidopsis thaliana]
Length = 312
Score = 37.4 bits (85), Expect = 0.082
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +2
Query: 95 WSLSKCSLLP-----SARVAQVQTRAQPAAATLTQTGRTHTGPLVCRPEKLYEHALELAR 259
W LSK L P S ++ QVQ ++P TL RTHT P R L + LE +
Sbjct: 155 WFLSKLGLNPTESQVSMKIEQVQKWSEPHIETLNSVIRTHTHPYTTRIMTLTKPHLERVQ 214
Query: 260 --LEEY-EDARAAFESLL 304
LE Y E+ R F+ L+
Sbjct: 215 VALEPYTENVRHGFQKLV 232
>ref|NP_296439.1| type III secretion chaperone, putative [Chlamydia muridarum]
gi|8163117|gb|AAF73524.1| type III secretion chaperone,
putative [Chlamydia muridarum]
Length = 335
Score = 37.0 bits (84), Expect = 0.11
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +2
Query: 221 PEKLYEHALELARLEEYEDARAAFESLLTRQPQLCKAWVSYAQMEKRSHRSSHHADRWQR 400
P+ LY A+ L+ +E+ E A ES + R P KAWV + R+ W R
Sbjct: 145 PQSLYNKAVILSDMEDEEGAIDLLESTVKRNPLYWKAWVKLGYLLSRN-------KMWDR 197
Query: 401 CRAVLQRGLSLNP 439
+R + L P
Sbjct: 198 ATEAYERVVQLRP 210
