KCC001666A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC001666A_C01 KCC001666A_c01
cttcacggcgaggggctgcaccacgccgcgggacgccgccatgactgtgcttcacgcggt
gatgggcgcggccgacaccaCCCGCTTCGCGCTCTTCAACACCTGGGCCATCCTGGCGAT
GAGCCCGCGCGTGCAGGACCTCATATACGAGGAGCAGAAGAAGGTGGTTGCAGAGAACGG
CCCCGAGCTGACGTACAAGACGGCCATGAGCATGCCCTACCTGGATGCGGCCTTTAAAGA
GGCGATGCGGCTGCTGCCCGCCTCCGCCGGCGGATTCCGAATGCTCACCAAGGAGCTGCG
GGTCGGTGACGTTCTGCTACCGCCAGGCACAATCATATGGTTCCACGCGCTGCTGCTGCA
GACCCTGGACCCGGTGCTGTGGGACGGCGACACGAGCGTGGACGTGCCGGTCCACATGGA
CTGGCGCAACAACTTCGAGGGCGCGTTCCGGCCCGAGCGATGGCTCAGCGAGGAGACCAA
GCCGCGCAGCTACTACATCTTTGGACAATGCGCGCACTTGTGCGCGGGAATGGTGCTGGT
GACGCTGGAGGTGAAGCTGCTACTGGCCATGGTGCTGCGCAAGTGGCGGCTGCAGCTTGA
GGTGCCGGACATGCTGGCGCGGGCCGAGCTGTTCCCCTACA
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001666A_C01 KCC001666A_c01
(641 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_307975.1| ENSANGP00000025098 [Anopheles gambiae] gi|30178... 82 7e-15
pir||I55488 25-hydroxyvitamin D 24-hydroxylase cytochrome P450 s... 80 3e-14
sp|Q07973|CP24_HUMAN Cytochrome P450 24A1, mitochondrial precurs... 80 3e-14
ref|NP_000773.1| cytochrome P450, family 24 precursor; cytochrom... 79 4e-14
gb|AAF81204.1|AF245504_1 25-hydroxyvitamin D3-24-hydroxylase [Su... 78 1e-13
>ref|XP_307975.1| ENSANGP00000025098 [Anopheles gambiae] gi|30178963|gb|EAA45526.1|
ENSANGP00000025098 [Anopheles gambiae str. PEST]
Length = 423
Score = 82.0 bits (201), Expect = 7e-15
Identities = 51/184 (27%), Positives = 88/184 (47%)
Frame = +2
Query: 41 MTVLHAVMGAADTTRFALFNTWAILAMSPRVQDLIYEEQKKVVAENGPELTYKTAMSMPY 220
+ + ++ +DTT + +LAM P+VQD ++EE + P+ +Y+T + Y
Sbjct: 251 VNIFTLIVQGSDTTASQVAFILLMLAMHPKVQDRVHEEIVSIYGSAAPDFSYETISAQTY 310
Query: 221 LDAAFKEAMRLLPASAGGFRMLTKELRVGDVLLPPGTIIWFHALLLQTLDPVLWDGDTSV 400
LD KE MR+ P R + +++GDV++PPG + + L + + LW V
Sbjct: 311 LDQVIKETMRMYPVGPIIGRQTIETVKLGDVIVPPGVTLLINILTVHR-NKELWGDRAHV 369
Query: 401 DVPVHMDWRNNFEGAFRPERWLSEETKPRSYYIFGQCAHLCAGMVLVTLEVKLLLAMVLR 580
P D P ++ +++ P SY FG C G L +K+++ VLR
Sbjct: 370 FDPDRFD----------PAQYDAKKQHPFSYIPFGGGPRNCIGYRYGMLAMKIMVTQVLR 419
Query: 581 KWRL 592
K++L
Sbjct: 420 KYQL 423
>pir||I55488 25-hydroxyvitamin D 24-hydroxylase cytochrome P450 subunit - human
(fragment) gi|544586|gb|AAB29308.1| 25-hydroxyvitamin D
24-hydroxylase cytochrome P450 subunit; P450cc24 [Homo
sapiens]
Length = 257
Score = 79.7 bits (195), Expect = 3e-14
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Frame = +2
Query: 35 AAMTVLHAVMGAADTTRFALFNTWAILAMSPRVQDLIYEEQKKVVAENGPELTYKTAMSM 214
AA+T L + A +TT +L L+ +P+VQ + +E + V+ EN + +M
Sbjct: 61 AAVTELQ--LAAVETTANSLMWILYNLSRNPQVQQKLLKEIQSVLPENQVPRA-EDLRNM 117
Query: 215 PYLDAAFKEAMRLLPASAGGFRMLTKELRVGDVLLPPGTIIWFHALLLQTLDPVLWDGDT 394
PYL A KE+MRL P+ R L K +G+ LP GT++ + +L + +
Sbjct: 118 PYLKACLKESMRLTPSVPFTTRTLDKATVLGEYALPKGTVLMLNTQVLGSSE-------- 169
Query: 395 SVDVPVHMDWRNNFEGA--FRPERWLSEETK--PRSYYIFGQCAHLCAGMVLVTLEVKLL 562
+NFE + FRPERWL E+ K P ++ FG +C G L L++ L
Sbjct: 170 -----------DNFEDSSQFRPERWLQEKEKINPFAHLPFGVGKRMCIGRRLAELQLHLA 218
Query: 563 LAMVLRKWRLQL---EVPDMLARAELFP 637
L ++RK+ +Q E +ML L P
Sbjct: 219 LCWIVRKYDIQATDNEPVEMLHSGTLVP 246
>sp|Q07973|CP24_HUMAN Cytochrome P450 24A1, mitochondrial precursor (P450-CC24) (Vitamin
D(3) 24-hydroxylase) (1,25-dihydroxyvitamin D(3)
24-hydroxylase) (24-OHase) gi|7939322|emb|CAB91829.1|
dJ1075G21.1 (cytochrome P450, subfamily XXIV (vitamin D
24-hydroxylase)) [Homo sapiens]
Length = 514
Score = 79.7 bits (195), Expect = 3e-14
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Frame = +2
Query: 35 AAMTVLHAVMGAADTTRFALFNTWAILAMSPRVQDLIYEEQKKVVAENGPELTYKTAMSM 214
AA+T L + A +TT +L L+ +P+VQ + +E + V+ EN + +M
Sbjct: 318 AAVTELQ--LAAVETTANSLMWILYNLSRNPQVQQKLLKEIQSVLPENQVPRA-EDLRNM 374
Query: 215 PYLDAAFKEAMRLLPASAGGFRMLTKELRVGDVLLPPGTIIWFHALLLQTLDPVLWDGDT 394
PYL A KE+MRL P+ R L K +G+ LP GT++ + +L + +
Sbjct: 375 PYLKACLKESMRLTPSVPFTTRTLDKATVLGEYALPKGTVLMLNTQVLGSSE-------- 426
Query: 395 SVDVPVHMDWRNNFEGA--FRPERWLSEETK--PRSYYIFGQCAHLCAGMVLVTLEVKLL 562
+NFE + FRPERWL E+ K P ++ FG +C G L L++ L
Sbjct: 427 -----------DNFEDSSQFRPERWLQEKEKINPFAHLPFGVGKRMCIGRRLAELQLHLA 475
Query: 563 LAMVLRKWRLQL---EVPDMLARAELFP 637
L ++RK+ +Q E +ML L P
Sbjct: 476 LCWIVRKYDIQATDNEPVEMLHSGTLVP 503
>ref|NP_000773.1| cytochrome P450, family 24 precursor; cytochrome P450, subfamily
XXIV (vitamin D 24-hydroxylase); 1,25-@dihydroxyvitamin
D3 24-hydroxylase; 24-ohase; vitamin D 24-hydroxylase
[Homo sapiens] gi|1079472|pir||A47436
1,25-dihydroxyvitamin D3 24-hydroxylase (EC 1.14.-.-)
precursor - human gi|306704|gb|AAA62379.1|
1,25-dihydroxyvitamin D3 24-hydroxylase
Length = 513
Score = 79.3 bits (194), Expect = 4e-14
Identities = 65/208 (31%), Positives = 100/208 (47%), Gaps = 7/208 (3%)
Frame = +2
Query: 35 AAMTVLHAVMGAADTTRFALFNTWAILAMSPRVQDLIYEEQKKVVAENGPELTYKTAMSM 214
AA+T L + A +TT +L L+ +P+VQ + +E + V+ EN + +M
Sbjct: 317 AAVTELQ--LAAVETTANSLMWILYNLSRNPQVQQKLLKEIQSVLPEN-QRPREEDLRNM 373
Query: 215 PYLDAAFKEAMRLLPASAGGFRMLTKELRVGDVLLPPGTIIWFHALLLQTLDPVLWDGDT 394
PYL A KE+MRL P R L K +G+ LP GT++ + +L + +
Sbjct: 374 PYLKACLKESMRLTPGVPFTTRTLDKATVLGEYALPKGTVLMLNTQVLGSSE-------- 425
Query: 395 SVDVPVHMDWRNNFEGA--FRPERWLSEETK--PRSYYIFGQCAHLCAGMVLVTLEVKLL 562
+NFE + FRPERWL E+ K P ++ FG +C G L L++ L
Sbjct: 426 -----------DNFEDSSQFRPERWLQEKEKINPFAHLPFGVGKRMCIGRRLAELQLHLA 474
Query: 563 LAMVLRKWRLQL---EVPDMLARAELFP 637
L ++RK+ +Q E +ML L P
Sbjct: 475 LCWIVRKYDIQATDNEPVEMLHSGTLVP 502
>gb|AAF81204.1|AF245504_1 25-hydroxyvitamin D3-24-hydroxylase [Sus scrofa]
Length = 513
Score = 78.2 bits (191), Expect = 1e-13
Identities = 57/185 (30%), Positives = 91/185 (48%), Gaps = 4/185 (2%)
Frame = +2
Query: 50 LHAVMGAADTTRFALFNTWAILAMSPRVQDLIYEEQKKVVAENGPELTYKTAMSMPYLDA 229
L A+ A++ + L+N L+ +P VQ + +E + V+ EN + +MPYL A
Sbjct: 324 LAAIETTANSLMWILYN----LSRNPHVQQKLLKEIQSVLPENQMPRA-EDLRNMPYLKA 378
Query: 230 AFKEAMRLLPASAGGFRMLTKELRVGDVLLPPGTIIWFHALLLQTLDPVLWDGDTSVDVP 409
KE+MRL P+ R L K + +G+ LP GT++ + +L T +
Sbjct: 379 CLKESMRLTPSVPFTTRTLDKAMVLGEYALPKGTVLMLNTYVLGTNE------------- 425
Query: 410 VHMDWRNNFEGA--FRPERWLSEETK--PRSYYIFGQCAHLCAGMVLVTLEVKLLLAMVL 577
NFE + FRPERWL E+ K P ++ FG +C G L L++ L L ++
Sbjct: 426 ------ENFEDSSQFRPERWLQEKKKINPFAHLPFGVGKRMCIGRRLAELQLHLALCRII 479
Query: 578 RKWRL 592
RK+ +
Sbjct: 480 RKYAI 484
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
CM077a03_r |
AV391761 |
1 |
614 |
2 |
HC068g01_r |
AV637101 |
210 |
641 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute