KCC001665A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001665A_C01 KCC001665A_c01
ctggttgcatttACAAGACTAAGCATCCATTAAGCTATTCGGACTGCAATTAAGCAGCGC
GGCAAATTCTTGCCGAAGAGCCTGTGGCGCACTCTGTATTTACCTGCATACCAATTATCT
TGTATAGACTAGATCCACTGTTGCTGTTGCACTTGAGCTCGCGCCGGATAAATGCCGCCC
AAGGAGGAGCAGATTAAGCTGGACTCCTTGTCTCCCCAACAGCTCGTGGAGCTTCGGCAG
AACCTAAATGCTGAGATCCAGCGGTTAATGGAGAGTGGGCAGGCACTGGCCCGCGCGTCC
AACACATTTGCCGGCACCAAGAAGTCCGTGGAGCAACTGGGCGCCTCCAAAGAAGGCCAG
TCCATCATGCTGCCACTCACGTCGTCGCTGTACGTGCCCGGAGAGGTGGCGGACGTGGAG
AAGGTGCTGGTGGACGTCGGCACCGGCTACTACGTGGAGATGTGCATTGCGGAGGCCGCC
AAGTACTTTGACCGCCGCATCAAGACGCTGCAGGAGAACATTGGCATCGTGCAGCAGACC
CTGAACGACCGCCGCAACGTGCTGATGACGGTGCAAGCATGCTGCAGAGAGATGGGGCGC
ACAGCGCGGCGTACCGGCTGCGAGACGGGAGCCTTGCGGGTGAGTCGACGGTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001665A_C01 KCC001665A_c01
         (653 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_651053.1| CG7048-PA [Drosophila melanogaster] gi|12230494...    98  9e-20
ref|XP_311700.1| ENSANGP00000015014 [Anopheles gambiae] gi|21295...    92  5e-18
ref|XP_330151.1| hypothetical protein [Neurospora crassa] gi|289...    90  3e-17
ref|NP_064415.1| prefoldin 5; EIG-1; c-myc binding protein MM-1 ...    89  7e-17
dbj|BAA14006.1| c-myc binding protein [Homo sapiens]                   89  7e-17

>ref|NP_651053.1| CG7048-PA [Drosophila melanogaster]
           gi|12230494|sp|Q9VCZ8|PFD5_DROME Probable prefoldin
           subunit 5 gi|7300866|gb|AAF56007.1| CG7048-PA
           [Drosophila melanogaster] gi|15291609|gb|AAK93073.1|
           GM14877p [Drosophila melanogaster]
          Length = 168

 Score = 98.2 bits (243), Expect = 9e-20
 Identities = 45/121 (37%), Positives = 76/121 (62%)
 Frame = +1

Query: 175 PPKEEQIKLDSLSPQQLVELRQNLNAEIQRLMESGQALARASNTFAGTKKSVEQLGASKE 354
           P K E I L  LSP+QL++++Q    EI  + +S   L      +AG+K+++     + E
Sbjct: 8   PAKSEMIDLTKLSPEQLIQIKQEFEQEITNVQDSLSTLHGCQAKYAGSKEALGTFQPNWE 67

Query: 355 GQSIMLPLTSSLYVPGEVADVEKVLVDVGTGYYVEMCIAEAAKYFDRRIKTLQENIGIVQ 534
            + I++PLTSS+YVPG V D+ + ++D+GTGYY+E  +  +  YF RR++ +QE I  ++
Sbjct: 68  NRQILVPLTSSMYVPGRVKDLNRFVIDIGTGYYIEKDLEGSKDYFKRRVEYVQEQIEKIE 127

Query: 535 Q 537
           +
Sbjct: 128 K 128

>ref|XP_311700.1| ENSANGP00000015014 [Anopheles gambiae] gi|21295163|gb|EAA07308.1|
           ENSANGP00000015014 [Anopheles gambiae str. PEST]
          Length = 217

 Score = 92.4 bits (228), Expect = 5e-18
 Identities = 43/133 (32%), Positives = 82/133 (61%)
 Frame = +1

Query: 178 PKEEQIKLDSLSPQQLVELRQNLNAEIQRLMESGQALARASNTFAGTKKSVEQLGASKEG 357
           P+ +QI L++L+ QQL +L+  L+ E+    ES   +  A + ++ +K+++EQ       
Sbjct: 63  PQMQQIDLNTLNLQQLTQLKNQLDQELSIFQESLNTIKMARSKYSASKEALEQFKGDWNE 122

Query: 358 QSIMLPLTSSLYVPGEVADVEKVLVDVGTGYYVEMCIAEAAKYFDRRIKTLQENIGIVQQ 537
           + I++PLT S+YVPG + D   V++++GTGYYVE  +  A ++F RRI+ +QE +  ++ 
Sbjct: 123 KQILVPLTGSMYVPGTIKDANNVIIEIGTGYYVENDLDSAKEFFKRRIEYVQEQLEKIEM 182

Query: 538 TLNDRRNVLMTVQ 576
              ++  +  T++
Sbjct: 183 MGIEKSKIRDTIR 195

>ref|XP_330151.1| hypothetical protein [Neurospora crassa] gi|28927158|gb|EAA36114.1|
           hypothetical protein [Neurospora crassa]
          Length = 155

 Score = 90.1 bits (222), Expect = 3e-17
 Identities = 51/142 (35%), Positives = 85/142 (58%), Gaps = 2/142 (1%)
 Frame = +1

Query: 172 MPPKEEQIKLDSLSPQQLVELRQNLNAEIQRLMESGQALARASNTFAGTKKSVEQLGASK 351
           M  K+E + ++SLS QQL  ++Q L+ E++ L  S   LA A   F    + V Q G+S 
Sbjct: 1   MSGKQEGVNIESLSAQQLTAVKQQLDEEVEHLTASYTQLAAAQAKFKECLRIV-QTGSSS 59

Query: 352 --EGQSIMLPLTSSLYVPGEVADVEKVLVDVGTGYYVEMCIAEAAKYFDRRIKTLQENIG 525
             + + I++PLT+SLYV G++++ ++V+VDVGTG+YVE     A  ++D ++K L  NI 
Sbjct: 60  FDDNKDILVPLTNSLYVKGKLSNPDRVIVDVGTGFYVEKDTKSATDFYDAKVKELGANIQ 119

Query: 526 IVQQTLNDRRNVLMTVQACCRE 591
            ++  +  + N L  V+   R+
Sbjct: 120 NLEAIVQGKTNNLRVVEEVLRQ 141

>ref|NP_064415.1| prefoldin 5; EIG-1; c-myc binding protein MM-1 [Mus musculus]
           gi|7209590|dbj|BAA92269.1| EIG-1 [Mus musculus]
          Length = 194

 Score = 88.6 bits (218), Expect = 7e-17
 Identities = 47/134 (35%), Positives = 74/134 (55%)
 Frame = +1

Query: 172 MPPKEEQIKLDSLSPQQLVELRQNLNAEIQRLMESGQALARASNTFAGTKKSVEQLGASK 351
           +P   + I +  L+  QL  L+  L+ E++ L  S   L      +   K  +  L  S 
Sbjct: 38  LPNMAQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSN 97

Query: 352 EGQSIMLPLTSSLYVPGEVADVEKVLVDVGTGYYVEMCIAEAAKYFDRRIKTLQENIGIV 531
           EG+ +++PLTSS+YVPG++ DVE VL+DVGTGYYVE    +A  +F R+I  L + +  +
Sbjct: 98  EGKELLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 157

Query: 532 QQTLNDRRNVLMTV 573
           Q  L ++  +   V
Sbjct: 158 QPALQEKHAMKQAV 171

>dbj|BAA14006.1| c-myc binding protein [Homo sapiens]
          Length = 167

 Score = 88.6 bits (218), Expect = 7e-17
 Identities = 47/134 (35%), Positives = 74/134 (55%)
 Frame = +1

Query: 172 MPPKEEQIKLDSLSPQQLVELRQNLNAEIQRLMESGQALARASNTFAGTKKSVEQLGASK 351
           +P   + I +  L+  QL  L+  L+ E++ L  S   L      +   K  +  L  S 
Sbjct: 11  LPNMAQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSN 70

Query: 352 EGQSIMLPLTSSLYVPGEVADVEKVLVDVGTGYYVEMCIAEAAKYFDRRIKTLQENIGIV 531
           EG+ +++PLTSS+YVPG++ DVE VL+DVGTGYYVE    +A  +F R+I  L + +  +
Sbjct: 71  EGKELLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 130

Query: 532 QQTLNDRRNVLMTV 573
           Q  L ++  +   V
Sbjct: 131 QPALQEKHAMKQAV 144



EST assemble image


clone accession position
1 LC090h04_r AV625320 1 464
2 LC068c07_r AV623759 13 520
3 HC049d02_r AV635670 17 466
4 LC013b01_r AV619781 28 514
5 CM076d08_r AV391699 40 653




Chlamydomonas reinhardtii
Kazusa DNA Research Institute