Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001656A_C01 KCC001656A_c01
(434 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178096.1| hypothetical integral membrane protein common f... 33 0.90
ref|NP_644001.1| chemotaxis MotB protein [Xanthomonas axonopodis... 33 0.90
ref|XP_238476.2| hypothetical protein XP_238476 [Rattus norvegicus] 33 1.2
gb|AAB60697.1| CD19 32 2.0
pir||A44441 B-cell antigen CD19 precursor - human gi|901823|gb|A... 32 2.0
>ref|NP_178096.1| hypothetical integral membrane protein common family [Arabidopsis
thaliana]
Length = 168
Score = 33.1 bits (74), Expect = 0.90
Identities = 19/49 (38%), Positives = 28/49 (56%), Gaps = 2/49 (4%)
Frame = +2
Query: 179 PVSASCRCAR*RH*L*HRPWPAPGMAVGAL--AGRQVNDLRRRGIKGLP 319
PV+A RC + RH + H +P P +A+ L AG V +L + GI+ P
Sbjct: 77 PVTALPRCLQTRHRISHHAFPLPSLALLHLRSAGSGVTNLNKTGIRHTP 125
>ref|NP_644001.1| chemotaxis MotB protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21110081|gb|AAM38537.1| chemotaxis MotB protein
[Xanthomonas axonopodis pv. citri str. 306]
Length = 380
Score = 33.1 bits (74), Expect = 0.90
Identities = 18/52 (34%), Positives = 25/52 (47%)
Frame = -3
Query: 255 AMPGAGQGLCYNQCLHRAQRQLADTGGRAPTYGLLVKGPSTNLS*SSIPKAA 100
A+ GAGQG+ + LH A Q+ D G A T V P+ ++ P A
Sbjct: 285 ALAGAGQGVALGKSLHDADTQVPDLSGAAATGTATVGTPAEGAKPATAPPVA 336
>ref|XP_238476.2| hypothetical protein XP_238476 [Rattus norvegicus]
Length = 219
Score = 32.7 bits (73), Expect = 1.2
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 225 YNQCLHRAQRQLADTGGRAPTYGLLVKGPSTNLS*SSIPKA 103
Y C RA R L D +P+Y L K +S S+PKA
Sbjct: 63 YRSCRQRAYRLLGDRSRNSPSYTLRFKTAEETISEDSVPKA 103
>gb|AAB60697.1| CD19
Length = 557
Score = 32.0 bits (71), Expect = 2.0
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 13/77 (16%)
Frame = -3
Query: 348 CLC--IKLSHLAGRPLMPRLRKSFT--CRPASAPTAMPGAGQGLCYNQCLH--------- 208
CLC + + HL ++ R RK T R T PG+G Y L
Sbjct: 304 CLCSLVGILHLQRALVLRRKRKRMTDPTRRFFKVTPPPGSGPQNQYGNVLSLPTPTSGLG 363
Query: 207 RAQRQLADTGGRAPTYG 157
RAQR A GG AP+YG
Sbjct: 364 RAQRWAAGLGGTAPSYG 380
>pir||A44441 B-cell antigen CD19 precursor - human gi|901823|gb|AAA69966.1| CD19
gene product gi|14495156|dbj|BAB60954.1| CD19 [Homo
sapiens]
Length = 556
Score = 32.0 bits (71), Expect = 2.0
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 13/77 (16%)
Frame = -3
Query: 348 CLC--IKLSHLAGRPLMPRLRKSFT--CRPASAPTAMPGAGQGLCYNQCLH--------- 208
CLC + + HL ++ R RK T R T PG+G Y L
Sbjct: 303 CLCSLVGILHLQRALVLRRKRKRMTDPTRRFFKVTPPPGSGPQNQYGNVLSLPTPTSGLG 362
Query: 207 RAQRQLADTGGRAPTYG 157
RAQR A GG AP+YG
Sbjct: 363 RAQRWAAGLGGTAPSYG 379
