KCC001652A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001652A_C01 KCC001652A_c01
gcacgaggccaggcgctgtttggcaccctgaccctggacgtgatggctCTGACCATCGCC
TACTCGCTGGCGGGCCTGGGCATTGCCATTGTGAACGACTTCAAGTCCATTGAGGGCGAC
AGGCAGATGGGCCTGCAGTCGCTGCCGGTGGCGTACGGCGTGGACACGGCCAAGTGGATT
TGCGTGTCCACCATCGACGTGACGCAGCTGGGCGTAGCTGCCTACCTGGCCTGGGGGCTG
CACGAGGAGCTGTATGGCGCGGTGCTGCTGGCGCTCATCCTGCCGCAGATCTACTTCCAG
TACAAGTACTTCCTGCCCGACCCCATCGCCAACGACGTCAAGTACCAGGCCTCCGCGCAG
CCCTTCCTGGTGTTCGGCCTGCTCACCGCCGGCCTGGCCTGCGGGCACCACGTCAACGCC
GTGGCCGCCGCCGCCTCCGCCGCCGGCGCCCTGTAAAGGCGCTGTGGGCTGGAGCCGGGA
GCACGTGGGCGCGGGCGGAAGCCGAGGGGGTACCGGGAAGACATGCATCGTCAACTGTGG
CGTGTGCTGAAGTGGAGCGAGTTGGGAGCATGCAGTGGCGTGGACGGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001652A_C01 KCC001652A_c01
         (588 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAP79186.1| chlorophyll synthetase [Bigelowiella natans]           189  2e-47
ref|NP_442211.1| chlorophyll a synthase [Synechocystis sp. PCC 6...   181  5e-45
ref|NP_190750.1| chlorophyll synthetase, putative [Arabidopsis t...   181  9e-45
ref|NP_488520.1| chlorophyll synthase 33 kD subunit [Nostoc sp. ...   179  2e-44
emb|CAB85464.1| chlorophyll synthase [Avena sativa]                   178  4e-44

>gb|AAP79186.1| chlorophyll synthetase [Bigelowiella natans]
          Length = 498

 Score =  189 bits (480), Expect = 2e-47
 Identities = 92/135 (68%), Positives = 111/135 (82%)
 Frame = +1

Query: 7   GQALFGTLTLDVMALTIAYSLAGLGIAIVNDFKSIEGDRQMGLQSLPVAYGVDTAKWICV 186
           GQA+FGTL   V+ L++ YS+AGLGIAIVNDFKSIEGDR++GLQSLPVA+GVDTAKW+C 
Sbjct: 363 GQAMFGTLNAPVIVLSLLYSIAGLGIAIVNDFKSIEGDRKLGLQSLPVAFGVDTAKWLCA 422

Query: 187 STIDVTQLGVAAYLAWGLHEELYGAVLLALILPQIYFQYKYFLPDPIANDVKYQASAQPF 366
            +IDVTQLGVAAYL + + E  Y  +L+ALILPQ++FQ KY L DPI  DV YQA++QPF
Sbjct: 423 GSIDVTQLGVAAYL-YSIGETTYANILIALILPQMFFQNKYLLKDPIKYDVNYQAASQPF 481

Query: 367 LVFGLLTAGLACGHH 411
           LVFG+L   LA GHH
Sbjct: 482 LVFGILDTALAMGHH 496

>ref|NP_442211.1| chlorophyll a synthase [Synechocystis sp. PCC 6803]
           gi|7445469|pir||S74363 chlorophyll synthase chain 33K -
           Synechocystis sp. (strain PCC 6803)
           gi|1001139|dbj|BAA10281.1| chlorophyll a synthase
           [Synechocystis sp. PCC 6803]
          Length = 324

 Score =  181 bits (460), Expect = 5e-45
 Identities = 87/134 (64%), Positives = 107/134 (78%)
 Frame = +1

Query: 7   GQALFGTLTLDVMALTIAYSLAGLGIAIVNDFKSIEGDRQMGLQSLPVAYGVDTAKWICV 186
           G ALFGTL   +M LT+ YSLAGLGIA+VNDFKS+EGDRQ+GL+SLPV +G+ TA WICV
Sbjct: 189 GHALFGTLNPTIMVLTLIYSLAGLGIAVVNDFKSVEGDRQLGLKSLPVMFGIGTAAWICV 248

Query: 187 STIDVTQLGVAAYLAWGLHEELYGAVLLALILPQIYFQYKYFLPDPIANDVKYQASAQPF 366
             IDV Q G+A YL + +H++LY  ++L L++PQI FQ  YFL +P+ NDVKYQASAQPF
Sbjct: 249 IMIDVFQAGIAGYLIY-VHQQLYATIVLLLLIPQITFQDMYFLRNPLENDVKYQASAQPF 307

Query: 367 LVFGLLTAGLACGH 408
           LVFG+L  GLA GH
Sbjct: 308 LVFGMLATGLALGH 321

>ref|NP_190750.1| chlorophyll synthetase, putative [Arabidopsis thaliana]
           gi|2129675|pir||S60222 probable chlorophyll synthetase
           G4 [imported] - Arabidopsis thaliana
           gi|972938|gb|AAA96740.1| putative chlorophyll synthetase
           gi|3068709|gb|AAC14409.1| putative chlorophyll
           synthetase [Arabidopsis thaliana]
           gi|14596067|gb|AAK68761.1| putative chlorophyll
           synthetase [Arabidopsis thaliana]
           gi|20148305|gb|AAM10043.1| chlorophyll synthetase
           [Arabidopsis thaliana]
          Length = 387

 Score =  181 bits (458), Expect = 9e-45
 Identities = 90/134 (67%), Positives = 104/134 (77%)
 Frame = +1

Query: 7   GQALFGTLTLDVMALTIAYSLAGLGIAIVNDFKSIEGDRQMGLQSLPVAYGVDTAKWICV 186
           GQALFGTLT DV+ LT+ YS+AGLGIAIVNDFKS+EGDR +GLQSLPVA+G +TAKWICV
Sbjct: 255 GQALFGTLTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICV 314

Query: 187 STIDVTQLGVAAYLAWGLHEELYGAVLLALILPQIYFQYKYFLPDPIANDVKYQASAQPF 366
             ID+TQL VA YL     +  Y   L+ALI+PQI FQ+KYFL DP+  DVKYQASAQPF
Sbjct: 315 GAIDITQLSVAGYLL-ASGKPYYALALVALIIPQIVFQFKYFLKDPVKYDVKYQASAQPF 373

Query: 367 LVFGLLTAGLACGH 408
           LV G+    LA  H
Sbjct: 374 LVLGIFVTALASQH 387

>ref|NP_488520.1| chlorophyll synthase 33 kD subunit [Nostoc sp. PCC 7120]
           gi|25306505|pir||AH2365 chlorophyll synthase 33 kD chain
           [imported] - Nostoc sp.  (strain PCC 7120)
           gi|17133616|dbj|BAB76179.1| chlorophyll synthase 33 kD
           subunit [Nostoc sp. PCC 7120]
          Length = 344

 Score =  179 bits (455), Expect = 2e-44
 Identities = 91/134 (67%), Positives = 105/134 (77%)
 Frame = +1

Query: 7   GQALFGTLTLDVMALTIAYSLAGLGIAIVNDFKSIEGDRQMGLQSLPVAYGVDTAKWICV 186
           G ALFG L   +  LT+ YSLAGLGIAIVNDFKS+EGDRQ+GLQSLPV +G++TA WICV
Sbjct: 209 GHALFGELNWKIAVLTLIYSLAGLGIAIVNDFKSVEGDRQLGLQSLPVMFGINTAAWICV 268

Query: 187 STIDVTQLGVAAYLAWGLHEELYGAVLLALILPQIYFQYKYFLPDPIANDVKYQASAQPF 366
             IDV Q  +AAYL   +HE LY A+L+ LI+PQI FQ  YFL DP+ NDVKYQASAQPF
Sbjct: 269 VMIDVFQGLIAAYLV-TIHENLYAAILVLLIIPQITFQDMYFLRDPLKNDVKYQASAQPF 327

Query: 367 LVFGLLTAGLACGH 408
           LV G+L AGLA GH
Sbjct: 328 LVLGMLVAGLALGH 341

>emb|CAB85464.1| chlorophyll synthase [Avena sativa]
          Length = 378

 Score =  178 bits (452), Expect = 4e-44
 Identities = 89/134 (66%), Positives = 103/134 (76%)
 Frame = +1

Query: 7   GQALFGTLTLDVMALTIAYSLAGLGIAIVNDFKSIEGDRQMGLQSLPVAYGVDTAKWICV 186
           GQALFGTLT D++ LT  YS+AGLGIAIVNDFKSIEGDR +GLQSLPVA+G++TAKWICV
Sbjct: 246 GQALFGTLTPDIVVLTCLYSIAGLGIAIVNDFKSIEGDRTLGLQSLPVAFGMETAKWICV 305

Query: 187 STIDVTQLGVAAYLAWGLHEELYGAVLLALILPQIYFQYKYFLPDPIANDVKYQASAQPF 366
             ID+TQL VAAYL     +  Y   LL L +PQ+  Q++YFL DP+  DVKYQASAQPF
Sbjct: 306 GAIDITQLSVAAYLL-STGKLYYALALLGLTIPQVILQFQYFLKDPVKYDVKYQASAQPF 364

Query: 367 LVFGLLTAGLACGH 408
            VFGLL   LA  H
Sbjct: 365 FVFGLLVTALATSH 378



EST assemble image


clone accession position
1 CM075d06_r AV391655 1 515
2 CM077d05_r AV391749 42 638




Chlamydomonas reinhardtii
Kazusa DNA Research Institute