KCC001649A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001649A_C01 KCC001649A_c01
taaTTGCGACTCACCGACTAGCCATGCAAACGGACTGACTGCTAAGCTGACTGGACTCTG
CAAGCGTTGCTGAACCCGCCTGAAAATGCAAGTTGCCCACCGGCAAACCGCCGGATCATG
CCTTCGGTCTCGCTCAGCTACTTCGGGGCGGCGGGCGGTGCCCGTGGCGTCCCAGCGTCC
CTCGTCGGCGCGACCGGGCCCATTGTGCAAGGCAGCCGAGCAGCTGGTTGGAGTGGGTAG
CAGTGTTCCCGAGACCTTTTTGACGAATGATGACTTGGCTAAGCTCGTGGACACGAACGA
CGAATGGATCGTGACGCGCACCGGCATCAAGAAGAGGCATGTGTTGGGCAAGGGCGAAAC
GCTCGTGCAGCACGCGGTTATTTCCTCGAAGCGCGCACTGGAGATGGCGGGTGTGGACGC
CAAGGACGTAGATCTTGTGCTTTTTGCCACCTCGTCACCGGACGACGTCTTCGGCAGCGC
TTGCCAGGTCCAGGCGGCCGTGGGCGCCTCCAAGGCGGTGGCCTTCGACCTCACAGCCGC
GTGCAGCGGCTTCGTGCTGGCCATGGTGACGGCGTCGCAGTACATCCGGGCGGGCACGTT
CAAGACGGTGCTGGTGGTGGGCGGCGACGCCCTGTCGCGCTTCGTGGACTGGCGCGACCG
GGGGACGTGCATCCTGTTCGGCGACGGCTGCGGCGCTGTCCTCATGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001649A_C01 KCC001649A_c01
         (708 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_176452.1| 3-ketoacyl-acyl carrier protein synthase III (K...   204  1e-51
gb|AAD43621.1|AC005698_20 T3P18.20 [Arabidopsis thaliana]             204  1e-51
gb|AAA61348.1| 3-ketoacyl-acyl carrier protein synthase III (KAS...   204  1e-51
gb|AAC04693.1| beta-ketoacyl-ACP synthase IIIA [Perilla frutescens]   201  9e-51
emb|CAC08184.1| beta-ketoacyl-acyl carrier protein synthase III ...   201  9e-51

>ref|NP_176452.1| 3-ketoacyl-acyl carrier protein synthase III (KAS III) [Arabidopsis
           thaliana] gi|27735183|sp|P49243|FABH_ARATH
           3-oxoacyl-[acyl-carrier-protein] synthase III,
           chloroplast precursor (Beta-ketoacyl-ACP synthase III)
           (KAS III) gi|1888359|emb|CAA72385.1| 3-ketoacyl-acyl
           carrier protein synthase III [Arabidopsis thaliana]
           gi|17380660|gb|AAL36160.1| putative 3-ketoacyl-acyl
           carrier protein synthase III (KAS III) [Arabidopsis
           thaliana] gi|20258997|gb|AAM14214.1| putative
           3-ketoacyl-acyl carrier protein synthase III (KAS III)
           [Arabidopsis thaliana]
          Length = 404

 Score =  204 bits (519), Expect = 1e-51
 Identities = 103/181 (56%), Positives = 137/181 (74%), Gaps = 1/181 (0%)
 Frame = +2

Query: 167 ASQRPSSARPGPLCKAAEQLVGVGSSVPETFLTNDDLAKLVDTNDEWIVTRTGIKKRHVL 346
           AS  PS  +   L  +  +L+G GS+VP   ++NDDLAK+VDTNDEWI TRTGI+ R V+
Sbjct: 53  ASSSPSQYQRPRLVPSGCKLIGCGSAVPSLLISNDDLAKIVDTNDEWIATRTGIRNRRVV 112

Query: 347 GKGETLVQHAVISSKRALEMAGVDAKDVDLVLFATSSPDDVFGSACQVQAAVGASK-AVA 523
              ++LV  AV ++ +ALEMA V  +D+DLVL  TS+PDD+FG+A Q+Q A+G +K  +A
Sbjct: 113 SGKDSLVGLAVEAATKALEMAEVVPEDIDLVLMCTSTPDDLFGAAPQIQKALGCTKNPLA 172

Query: 524 FDLTAACSGFVLAMVTASQYIRAGTFKTVLVVGGDALSRFVDWRDRGTCILFGDGCGAVL 703
           +D+TAACSGFVL +V+A+ +IR G FK VLV+G D+LSRFVDW DRGTCILFGD  GAV+
Sbjct: 173 YDITAACSGFVLGLVSAACHIRGGGFKNVLVIGADSLSRFVDWTDRGTCILFGDAAGAVV 232

Query: 704 M 706
           +
Sbjct: 233 V 233

>gb|AAD43621.1|AC005698_20 T3P18.20 [Arabidopsis thaliana]
          Length = 435

 Score =  204 bits (519), Expect = 1e-51
 Identities = 103/181 (56%), Positives = 137/181 (74%), Gaps = 1/181 (0%)
 Frame = +2

Query: 167 ASQRPSSARPGPLCKAAEQLVGVGSSVPETFLTNDDLAKLVDTNDEWIVTRTGIKKRHVL 346
           AS  PS  +   L  +  +L+G GS+VP   ++NDDLAK+VDTNDEWI TRTGI+ R V+
Sbjct: 53  ASSSPSQYQRPRLVPSGCKLIGCGSAVPSLLISNDDLAKIVDTNDEWIATRTGIRNRRVV 112

Query: 347 GKGETLVQHAVISSKRALEMAGVDAKDVDLVLFATSSPDDVFGSACQVQAAVGASK-AVA 523
              ++LV  AV ++ +ALEMA V  +D+DLVL  TS+PDD+FG+A Q+Q A+G +K  +A
Sbjct: 113 SGKDSLVGLAVEAATKALEMAEVVPEDIDLVLMCTSTPDDLFGAAPQIQKALGCTKNPLA 172

Query: 524 FDLTAACSGFVLAMVTASQYIRAGTFKTVLVVGGDALSRFVDWRDRGTCILFGDGCGAVL 703
           +D+TAACSGFVL +V+A+ +IR G FK VLV+G D+LSRFVDW DRGTCILFGD  GAV+
Sbjct: 173 YDITAACSGFVLGLVSAACHIRGGGFKNVLVIGADSLSRFVDWTDRGTCILFGDAAGAVV 232

Query: 704 M 706
           +
Sbjct: 233 V 233

>gb|AAA61348.1| 3-ketoacyl-acyl carrier protein synthase III (KAS III)
          Length = 404

 Score =  204 bits (518), Expect = 1e-51
 Identities = 103/181 (56%), Positives = 136/181 (74%), Gaps = 1/181 (0%)
 Frame = +2

Query: 167 ASQRPSSARPGPLCKAAEQLVGVGSSVPETFLTNDDLAKLVDTNDEWIVTRTGIKKRHVL 346
           AS  PS  +   L  +  +L+G GS+VP   ++NDDLAK+VDTNDEWI TRTGI+ R V+
Sbjct: 53  ASSSPSQYQRPRLVPSGCKLIGCGSAVPSLLISNDDLAKIVDTNDEWIATRTGIRTRRVV 112

Query: 347 GKGETLVQHAVISSKRALEMAGVDAKDVDLVLFATSSPDDVFGSACQVQAAVGASK-AVA 523
              ++LV  AV ++ +ALEMA V  +D+DLVL  TS+PDD+FG+A Q+Q A+G +K  +A
Sbjct: 113 SAKDSLVGLAVEAATKALEMAEVVPEDIDLVLMCTSTPDDLFGAAPQIQKALGCTKNPLA 172

Query: 524 FDLTAACSGFVLAMVTASQYIRAGTFKTVLVVGGDALSRFVDWRDRGTCILFGDGCGAVL 703
           +D+TAACSGFVL +V+A  +IR G FK VLV+G D+LSRFVDW DRGTCILFGD  GAV+
Sbjct: 173 YDITAACSGFVLGLVSADCHIRGGGFKNVLVIGADSLSRFVDWTDRGTCILFGDAAGAVV 232

Query: 704 M 706
           +
Sbjct: 233 V 233

>gb|AAC04693.1| beta-ketoacyl-ACP synthase IIIA [Perilla frutescens]
          Length = 401

 Score =  201 bits (511), Expect = 9e-51
 Identities = 100/177 (56%), Positives = 133/177 (74%), Gaps = 1/177 (0%)
 Frame = +2

Query: 179 PSSARPGPLCKAAEQLVGVGSSVPETFLTNDDLAKLVDTNDEWIVTRTGIKKRHVLGKGE 358
           PS +R   L     +LVG GS+VP   ++NDDL+K+VDTNDEWI  RTGI+ R +L   +
Sbjct: 54  PSESRASRLVSRGCKLVGCGSAVPSLQISNDDLSKIVDTNDEWISVRTGIRNRRILSGKD 113

Query: 359 TLVQHAVISSKRALEMAGVDAKDVDLVLFATSSPDDVFGSACQVQAAVGA-SKAVAFDLT 535
           +L   AV ++++ALEMA VD  +VDLVL  TS+P+D+FGSA Q+Q A+G  +  +A+D+T
Sbjct: 114 SLTDLAVEAARKALEMAEVDPDEVDLVLMCTSTPEDLFGSAPQIQKALGCKNNPLAYDIT 173

Query: 536 AACSGFVLAMVTASQYIRAGTFKTVLVVGGDALSRFVDWRDRGTCILFGDGCGAVLM 706
           AACSGFVL +V+A+ YI+ G FK VLV+G DALSR+VDW DRG+CILFGD  GAVL+
Sbjct: 174 AACSGFVLGLVSAACYIKGGGFKNVLVIGADALSRYVDWTDRGSCILFGDAAGAVLV 230

>emb|CAC08184.1| beta-ketoacyl-acyl carrier protein synthase III [Pisum sativum]
          Length = 397

 Score =  201 bits (511), Expect = 9e-51
 Identities = 97/177 (54%), Positives = 136/177 (76%), Gaps = 1/177 (0%)
 Frame = +2

Query: 179 PSSARPGPLCKAAEQLVGVGSSVPETFLTNDDLAKLVDTNDEWIVTRTGIKKRHVLGKGE 358
           P+ +R   L     +LVG GS+VP   ++ND+L+K+VDTNDEWI  RTGI++RHVL  G+
Sbjct: 51  PTQSRIPRLVSQGCKLVGCGSAVPALQISNDELSKIVDTNDEWISVRTGIRRRHVLSGGD 110

Query: 359 TLVQHAVISSKRALEMAGVDAKDVDLVLFATSSPDDVFGSACQVQAAVGASK-AVAFDLT 535
           +L+  A  ++K+ALEMA VD  D+DL+L  TS+P+D+FGSA Q+Q  +G +K  +++D+T
Sbjct: 111 SLITLAADAAKKALEMAKVDPDDIDLILMCTSTPEDLFGSAPQIQKQLGCTKNPLSYDIT 170

Query: 536 AACSGFVLAMVTASQYIRAGTFKTVLVVGGDALSRFVDWRDRGTCILFGDGCGAVLM 706
           AACSGFVL +++A+ +IR G F+ VLV+G DALSR+VDW DRGTCILFGD  GAV++
Sbjct: 171 AACSGFVLGLLSAACHIRGGGFRNVLVIGADALSRYVDWTDRGTCILFGDAAGAVVV 227



EST assemble image


clone accession position
1 MX202c09_r BP089178 1 421
2 HCL031a05_r AV641283 4 470
3 MX206c04_r BP089385 235 708
4 CM074h11_r AV391569 320 819




Chlamydomonas reinhardtii
Kazusa DNA Research Institute