KCC001649A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC001649A_C01 KCC001649A_c01
taaTTGCGACTCACCGACTAGCCATGCAAACGGACTGACTGCTAAGCTGACTGGACTCTG
CAAGCGTTGCTGAACCCGCCTGAAAATGCAAGTTGCCCACCGGCAAACCGCCGGATCATG
CCTTCGGTCTCGCTCAGCTACTTCGGGGCGGCGGGCGGTGCCCGTGGCGTCCCAGCGTCC
CTCGTCGGCGCGACCGGGCCCATTGTGCAAGGCAGCCGAGCAGCTGGTTGGAGTGGGTAG
CAGTGTTCCCGAGACCTTTTTGACGAATGATGACTTGGCTAAGCTCGTGGACACGAACGA
CGAATGGATCGTGACGCGCACCGGCATCAAGAAGAGGCATGTGTTGGGCAAGGGCGAAAC
GCTCGTGCAGCACGCGGTTATTTCCTCGAAGCGCGCACTGGAGATGGCGGGTGTGGACGC
CAAGGACGTAGATCTTGTGCTTTTTGCCACCTCGTCACCGGACGACGTCTTCGGCAGCGC
TTGCCAGGTCCAGGCGGCCGTGGGCGCCTCCAAGGCGGTGGCCTTCGACCTCACAGCCGC
GTGCAGCGGCTTCGTGCTGGCCATGGTGACGGCGTCGCAGTACATCCGGGCGGGCACGTT
CAAGACGGTGCTGGTGGTGGGCGGCGACGCCCTGTCGCGCTTCGTGGACTGGCGCGACCG
GGGGACGTGCATCCTGTTCGGCGACGGCTGCGGCGCTGTCCTCATGCG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001649A_C01 KCC001649A_c01
(708 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176452.1| 3-ketoacyl-acyl carrier protein synthase III (K... 204 1e-51
gb|AAD43621.1|AC005698_20 T3P18.20 [Arabidopsis thaliana] 204 1e-51
gb|AAA61348.1| 3-ketoacyl-acyl carrier protein synthase III (KAS... 204 1e-51
gb|AAC04693.1| beta-ketoacyl-ACP synthase IIIA [Perilla frutescens] 201 9e-51
emb|CAC08184.1| beta-ketoacyl-acyl carrier protein synthase III ... 201 9e-51
>ref|NP_176452.1| 3-ketoacyl-acyl carrier protein synthase III (KAS III) [Arabidopsis
thaliana] gi|27735183|sp|P49243|FABH_ARATH
3-oxoacyl-[acyl-carrier-protein] synthase III,
chloroplast precursor (Beta-ketoacyl-ACP synthase III)
(KAS III) gi|1888359|emb|CAA72385.1| 3-ketoacyl-acyl
carrier protein synthase III [Arabidopsis thaliana]
gi|17380660|gb|AAL36160.1| putative 3-ketoacyl-acyl
carrier protein synthase III (KAS III) [Arabidopsis
thaliana] gi|20258997|gb|AAM14214.1| putative
3-ketoacyl-acyl carrier protein synthase III (KAS III)
[Arabidopsis thaliana]
Length = 404
Score = 204 bits (519), Expect = 1e-51
Identities = 103/181 (56%), Positives = 137/181 (74%), Gaps = 1/181 (0%)
Frame = +2
Query: 167 ASQRPSSARPGPLCKAAEQLVGVGSSVPETFLTNDDLAKLVDTNDEWIVTRTGIKKRHVL 346
AS PS + L + +L+G GS+VP ++NDDLAK+VDTNDEWI TRTGI+ R V+
Sbjct: 53 ASSSPSQYQRPRLVPSGCKLIGCGSAVPSLLISNDDLAKIVDTNDEWIATRTGIRNRRVV 112
Query: 347 GKGETLVQHAVISSKRALEMAGVDAKDVDLVLFATSSPDDVFGSACQVQAAVGASK-AVA 523
++LV AV ++ +ALEMA V +D+DLVL TS+PDD+FG+A Q+Q A+G +K +A
Sbjct: 113 SGKDSLVGLAVEAATKALEMAEVVPEDIDLVLMCTSTPDDLFGAAPQIQKALGCTKNPLA 172
Query: 524 FDLTAACSGFVLAMVTASQYIRAGTFKTVLVVGGDALSRFVDWRDRGTCILFGDGCGAVL 703
+D+TAACSGFVL +V+A+ +IR G FK VLV+G D+LSRFVDW DRGTCILFGD GAV+
Sbjct: 173 YDITAACSGFVLGLVSAACHIRGGGFKNVLVIGADSLSRFVDWTDRGTCILFGDAAGAVV 232
Query: 704 M 706
+
Sbjct: 233 V 233
>gb|AAD43621.1|AC005698_20 T3P18.20 [Arabidopsis thaliana]
Length = 435
Score = 204 bits (519), Expect = 1e-51
Identities = 103/181 (56%), Positives = 137/181 (74%), Gaps = 1/181 (0%)
Frame = +2
Query: 167 ASQRPSSARPGPLCKAAEQLVGVGSSVPETFLTNDDLAKLVDTNDEWIVTRTGIKKRHVL 346
AS PS + L + +L+G GS+VP ++NDDLAK+VDTNDEWI TRTGI+ R V+
Sbjct: 53 ASSSPSQYQRPRLVPSGCKLIGCGSAVPSLLISNDDLAKIVDTNDEWIATRTGIRNRRVV 112
Query: 347 GKGETLVQHAVISSKRALEMAGVDAKDVDLVLFATSSPDDVFGSACQVQAAVGASK-AVA 523
++LV AV ++ +ALEMA V +D+DLVL TS+PDD+FG+A Q+Q A+G +K +A
Sbjct: 113 SGKDSLVGLAVEAATKALEMAEVVPEDIDLVLMCTSTPDDLFGAAPQIQKALGCTKNPLA 172
Query: 524 FDLTAACSGFVLAMVTASQYIRAGTFKTVLVVGGDALSRFVDWRDRGTCILFGDGCGAVL 703
+D+TAACSGFVL +V+A+ +IR G FK VLV+G D+LSRFVDW DRGTCILFGD GAV+
Sbjct: 173 YDITAACSGFVLGLVSAACHIRGGGFKNVLVIGADSLSRFVDWTDRGTCILFGDAAGAVV 232
Query: 704 M 706
+
Sbjct: 233 V 233
>gb|AAA61348.1| 3-ketoacyl-acyl carrier protein synthase III (KAS III)
Length = 404
Score = 204 bits (518), Expect = 1e-51
Identities = 103/181 (56%), Positives = 136/181 (74%), Gaps = 1/181 (0%)
Frame = +2
Query: 167 ASQRPSSARPGPLCKAAEQLVGVGSSVPETFLTNDDLAKLVDTNDEWIVTRTGIKKRHVL 346
AS PS + L + +L+G GS+VP ++NDDLAK+VDTNDEWI TRTGI+ R V+
Sbjct: 53 ASSSPSQYQRPRLVPSGCKLIGCGSAVPSLLISNDDLAKIVDTNDEWIATRTGIRTRRVV 112
Query: 347 GKGETLVQHAVISSKRALEMAGVDAKDVDLVLFATSSPDDVFGSACQVQAAVGASK-AVA 523
++LV AV ++ +ALEMA V +D+DLVL TS+PDD+FG+A Q+Q A+G +K +A
Sbjct: 113 SAKDSLVGLAVEAATKALEMAEVVPEDIDLVLMCTSTPDDLFGAAPQIQKALGCTKNPLA 172
Query: 524 FDLTAACSGFVLAMVTASQYIRAGTFKTVLVVGGDALSRFVDWRDRGTCILFGDGCGAVL 703
+D+TAACSGFVL +V+A +IR G FK VLV+G D+LSRFVDW DRGTCILFGD GAV+
Sbjct: 173 YDITAACSGFVLGLVSADCHIRGGGFKNVLVIGADSLSRFVDWTDRGTCILFGDAAGAVV 232
Query: 704 M 706
+
Sbjct: 233 V 233
>gb|AAC04693.1| beta-ketoacyl-ACP synthase IIIA [Perilla frutescens]
Length = 401
Score = 201 bits (511), Expect = 9e-51
Identities = 100/177 (56%), Positives = 133/177 (74%), Gaps = 1/177 (0%)
Frame = +2
Query: 179 PSSARPGPLCKAAEQLVGVGSSVPETFLTNDDLAKLVDTNDEWIVTRTGIKKRHVLGKGE 358
PS +R L +LVG GS+VP ++NDDL+K+VDTNDEWI RTGI+ R +L +
Sbjct: 54 PSESRASRLVSRGCKLVGCGSAVPSLQISNDDLSKIVDTNDEWISVRTGIRNRRILSGKD 113
Query: 359 TLVQHAVISSKRALEMAGVDAKDVDLVLFATSSPDDVFGSACQVQAAVGA-SKAVAFDLT 535
+L AV ++++ALEMA VD +VDLVL TS+P+D+FGSA Q+Q A+G + +A+D+T
Sbjct: 114 SLTDLAVEAARKALEMAEVDPDEVDLVLMCTSTPEDLFGSAPQIQKALGCKNNPLAYDIT 173
Query: 536 AACSGFVLAMVTASQYIRAGTFKTVLVVGGDALSRFVDWRDRGTCILFGDGCGAVLM 706
AACSGFVL +V+A+ YI+ G FK VLV+G DALSR+VDW DRG+CILFGD GAVL+
Sbjct: 174 AACSGFVLGLVSAACYIKGGGFKNVLVIGADALSRYVDWTDRGSCILFGDAAGAVLV 230
>emb|CAC08184.1| beta-ketoacyl-acyl carrier protein synthase III [Pisum sativum]
Length = 397
Score = 201 bits (511), Expect = 9e-51
Identities = 97/177 (54%), Positives = 136/177 (76%), Gaps = 1/177 (0%)
Frame = +2
Query: 179 PSSARPGPLCKAAEQLVGVGSSVPETFLTNDDLAKLVDTNDEWIVTRTGIKKRHVLGKGE 358
P+ +R L +LVG GS+VP ++ND+L+K+VDTNDEWI RTGI++RHVL G+
Sbjct: 51 PTQSRIPRLVSQGCKLVGCGSAVPALQISNDELSKIVDTNDEWISVRTGIRRRHVLSGGD 110
Query: 359 TLVQHAVISSKRALEMAGVDAKDVDLVLFATSSPDDVFGSACQVQAAVGASK-AVAFDLT 535
+L+ A ++K+ALEMA VD D+DL+L TS+P+D+FGSA Q+Q +G +K +++D+T
Sbjct: 111 SLITLAADAAKKALEMAKVDPDDIDLILMCTSTPEDLFGSAPQIQKQLGCTKNPLSYDIT 170
Query: 536 AACSGFVLAMVTASQYIRAGTFKTVLVVGGDALSRFVDWRDRGTCILFGDGCGAVLM 706
AACSGFVL +++A+ +IR G F+ VLV+G DALSR+VDW DRGTCILFGD GAV++
Sbjct: 171 AACSGFVLGLLSAACHIRGGGFRNVLVIGADALSRYVDWTDRGTCILFGDAAGAVVV 227
EST assemble image
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|
|
|
clone |
accession |
position |
1 |
MX202c09_r |
BP089178 |
1 |
421 |
2 |
HCL031a05_r |
AV641283 |
4 |
470 |
3 |
MX206c04_r |
BP089385 |
235 |
708 |
4 |
CM074h11_r |
AV391569 |
320 |
819 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute