KCC001638A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001638A_C01 KCC001638A_c01
gctctgaatatgaagcacacttgaaatacacgggaaatTGCTCGGCTTCGAAGCGATACT
CCAAACACACAGAAGCAAACCCCGCGACCATCATCCACACCATCTACGATATCATCAACC
ATAGACAGTGCATCTCGTTGTATCAAAGCTTTTTTCTGTAACCTAAGCGGGCTTGACACA
CTGAAGAGCGCCATTGCGTGTCAGCCTGGAGACAATTACATAGCACCGCATAGCTCACAA
TCAAATGGACGAGGAGGGCAGCGCGACTGCGCGAGCAAAAATGATGCCACAAACGCTGGT
GCTAGACCATGTGTCACCAGCAACGCGCCTGCTGGAGAAGCGGCGACAAATGTTCGAGGT
GCAGGAGGCGCTTGAAGCCCAGAAGCAGGACTTCAATCGCAAAGAGGAGGTCTTCAAACG
GCGAGAGGAAGCTCTGAAACTAAAGGATTTGGAGCTGCAAGAGTCCCTAATCCGTTTCAG
CAAGTTCCTTCAAGAGAACGATTCCAAGCGGGCACGAGCAGAGAAGAAAGCAAACGATGA
GATTAAAGCACGTATCCAGAAGGAGAAGGAGATTGAGCAACTTACAGAGGTGCTGGAGGA
GCTGAAGTCTGAGAAGGAGCGCATCCTTGAAGTGCTCGAAAAGAACATGCGGTACCAGCA
CTACCTGGAGAGCGTGCTGGAGGTGGCGGATGAGTATCAGGAGGTGGCTGACCTGTTGCT
GCGGCACGCTACACTGTCTGCCACCAACGCAGACCTGAAGGACCACAGCGCAAATGCGCG
AGCTGCGGAAAGGTGCGACGACTGCGATCTCTGAACGAGACGCCAATCTAACTCAAACCG
TGGCAGTGGACGGCTGTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001638A_C01 KCC001638A_c01
         (858 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_220585.1| similar to hypothetical protein FLJ32734 [Rattu...    98  2e-19
emb|CAC37123.2| hypothetical predicted protein P1046.18, unknown...    96  6e-19
ref|NP_653282.1| hypothetical protein FLJ32734 [Homo sapiens] gi...    81  2e-14
gb|AAH29224.1| FLJ32734 protein [Homo sapiens]                         75  2e-12
ref|XP_144548.1| similar to hypothetical protein FLJ32734 [Homo ...    73  5e-12

>ref|XP_220585.1| similar to hypothetical protein FLJ32734 [Rattus norvegicus]
          Length = 316

 Score = 97.8 bits (242), Expect = 2e-19
 Identities = 58/174 (33%), Positives = 101/174 (57%), Gaps = 9/174 (5%)
 Frame = +2

Query: 314 SPATRLLEKRRQMFEVQEALEAQKQDFNRKEEVFKRREEALKLKDLELQESLIRFSKFLQ 493
           SP+ RLLEK+++   +QEA+E +K+ F R+ E    R E L +K+ +L+  + +F +F+Q
Sbjct: 39  SPSIRLLEKKKEAKVMQEAMEHKKETFQRRMETLNLRWEELGIKEEQLKAHIQKFEQFIQ 98

Query: 494 ENDSKRARAEKKANDEIKARIQKEKEIEQLTEVLEELKSEKERILEVLEKNMRYQHYLES 673
           END KR RA KKAN E + + Q+ +E+ +  + +  L+ E +++   L+    +  YLE 
Sbjct: 99  ENDQKRIRALKKANKERELKRQRLRELAKAKQEMTALRLEHQKLSVKLQDYAIFNKYLEK 158

Query: 674 VLEVADEYQEVADLLLRHATLSATNADL---------KDHSANARAAERCDDCD 808
           V+E   E++E+ +++ R+ TL + + DL         K   A AR A   ++ D
Sbjct: 159 VVE-NSEFEEIHEVIARYKTLVSMHHDLMQSAQEGQEKIEHAKARLARYMEEKD 211

>emb|CAC37123.2| hypothetical predicted protein P1046.18, unknown function
           [Leishmania major]
          Length = 307

 Score = 96.3 bits (238), Expect = 6e-19
 Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
 Frame = +2

Query: 302 LDHVSPATRLLEKRRQMFEVQEALEAQKQDFNRKEEVFKRREEALKLKDLELQESLIRFS 481
           LD ++ AT+L   RR   +VQ  LEA+++++NR+    K  E  L     ELQ++L+++ 
Sbjct: 5   LDSITAATKL---RRAEIDVQRELEAKREEYNRRMAQVKEGEAQLAADRAELQDTLVQYY 61

Query: 482 KFLQENDSKRARAEKKANDEIKARIQKEKEIEQLTEVLEELKSEKERILEVLEKNMRYQH 661
           KF+QEN+ KR+RA KK   E K R ++E  I QLT+ L+ L+ +++ +    E   +YQ 
Sbjct: 62  KFIQENEIKRSRAMKKVAIEEKQRKEREAYIAQLTQRLQGLELKRDEMKTQYEDIEKYQT 121

Query: 662 YLESVL--EVADEYQEVADLLLRHATL 736
           +LE VL     DEYQE  D++ R  TL
Sbjct: 122 FLEEVLSRNDGDEYQEPRDIMKRWMTL 148

>ref|NP_653282.1| hypothetical protein FLJ32734 [Homo sapiens]
           gi|16552930|dbj|BAB71414.1| unnamed protein product
           [Homo sapiens]
          Length = 316

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 53/177 (29%), Positives = 95/177 (52%), Gaps = 9/177 (5%)
 Frame = +2

Query: 329 LLEKRRQMFEVQEALEAQKQDFNRKEEVFKRREEALKLKDLELQESLIRFSKFLQENDSK 508
           LLEK+++   + + +  +K+ F R+ E    R E L +K+ +L+  + +  +F+QEND K
Sbjct: 44  LLEKKKETEIMHQTMVQKKKMFQRRMETLNLRWEELGVKEAQLKAHIQKSEQFIQENDQK 103

Query: 509 RARAEKKANDEIKARIQKEKEIEQLTEVLEELKSEKERILEVLEKNMRYQHYLESVLEVA 688
           R RA KKAN E + + Q  +E+ +  + +  L+ E +R+   L+    +  YLE V+E  
Sbjct: 104 RIRAMKKANKERELKCQHMQELTKRKQEMVALRLEHQRLSAKLKDYYIFNKYLEKVVE-N 162

Query: 689 DEYQEVADLLLRHATLSATNADL---------KDHSANARAAERCDDCDL*TRRQSN 832
            E++E+ +++ R+ TL +   DL         K   A AR A   ++ D    +Q+N
Sbjct: 163 SEFEEIHEVIARYKTLVSMRHDLMQSAQEGQEKIERAKARLARYMEEKDDEILQQNN 219

>gb|AAH29224.1| FLJ32734 protein [Homo sapiens]
          Length = 242

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 41/127 (32%), Positives = 74/127 (57%)
 Frame = +2

Query: 314 SPATRLLEKRRQMFEVQEALEAQKQDFNRKEEVFKRREEALKLKDLELQESLIRFSKFLQ 493
           SP+  LLEK+++   + + +  +K+ F R+ E    R E L +K+ +L+  + +  +F+Q
Sbjct: 39  SPSIWLLEKKKETEIMHQTMVQKKKMFQRRMETLNLRWEELGVKEAQLKAHIQKSEQFIQ 98

Query: 494 ENDSKRARAEKKANDEIKARIQKEKEIEQLTEVLEELKSEKERILEVLEKNMRYQHYLES 673
           END KR RA KKAN E + + Q  +E+ +  + +  L+ E +R+   L+    +  YLE 
Sbjct: 99  ENDQKRIRAMKKANKERELKCQHMQELTKRKQEMVALRLEHQRLSAKLKDYYIFNKYLEK 158

Query: 674 VLEVADE 694
           V+E ++E
Sbjct: 159 VVENSEE 165

>ref|XP_144548.1| similar to hypothetical protein FLJ32734 [Homo sapiens] [Mus
           musculus]
          Length = 306

 Score = 73.2 bits (178), Expect = 5e-12
 Identities = 48/152 (31%), Positives = 83/152 (54%)
 Frame = +2

Query: 305 DHVSPATRLLEKRRQMFEVQEALEAQKQDFNRKEEVFKRREEALKLKDLELQESLIRFSK 484
           D  S    +LEK+ ++      L+AQK+++    E   +R   L+ K  ELQ S+I + K
Sbjct: 27  DDSSVLQLILEKKEELAVADLGLQAQKKEYRSTIESVNQRWRELEQKGQELQGSVISYDK 86

Query: 485 FLQENDSKRARAEKKANDEIKARIQKEKEIEQLTEVLEELKSEKERILEVLEKNMRYQHY 664
           FL+E +++  RA +KA +E K     + E+ +L   L+EL+ ++ R+   +++       
Sbjct: 87  FLKEVEAR--RAARKAIEERKITGNLDAELRRLRTQLKELRLQRARLQRKVQRLEPCARI 144

Query: 665 LESVLEVADEYQEVADLLLRHATLSATNADLK 760
           L+  LE    ++EV+DL+ R  TL +T A LK
Sbjct: 145 LKRALEKRPVFEEVSDLVARFETLVSTKAALK 176



EST assemble image


clone accession position
1 MX019a09_r BP086865 1 391
2 HC098d10_r AV639364 39 554
3 CM073h02_r AV391416 235 858
4 LCL026e04_r AV627425 266 668




Chlamydomonas reinhardtii
Kazusa DNA Research Institute