Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001636A_C01 KCC001636A_c01
(598 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S08491 hypothetical protein - golden hamster gi|1333847|emb... 40 0.025
dbj|BAC87075.1| unnamed protein product [Homo sapiens] 39 0.055
dbj|BAC86092.1| unnamed protein product [Homo sapiens] 36 0.36
ref|ZP_00057154.1| COG0172: Seryl-tRNA synthetase [Thermobifida ... 36 0.36
dbj|BAC58076.2| large tegument protein [Cercopithecine herpesvir... 36 0.47
>pir||S08491 hypothetical protein - golden hamster gi|1333847|emb|CAA33027.1|
unnamed protein product [Cricetulus sp.]
Length = 285
Score = 40.0 bits (92), Expect = 0.025
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 382 TTPRCRTHAPCLQVT*HVLPLRRIRAPHMPHAPTTQQVSHATELTRLCRSPAF-ASGPRN 558
TTPRCR H PCL P++ R P PH+ T +L P+ AS +
Sbjct: 51 TTPRCRCHCPCL------CPVQPARPPARPHSTDAASPHACTSSNQLLPLPSLSASRAQP 104
Query: 559 SPEWGPSHRA*VP 597
P G HRA P
Sbjct: 105 WPALGRPHRALQP 117
>dbj|BAC87075.1| unnamed protein product [Homo sapiens]
Length = 266
Score = 38.9 bits (89), Expect = 0.055
Identities = 35/102 (34%), Positives = 43/102 (41%), Gaps = 1/102 (0%)
Frame = +2
Query: 275 PGPQCKRTISRDIHAPSSSLAC-VHDVTPNKFNPLITRLLAVARTPPASRSPDTSCRCAE 451
P R + +H P+SSL + P +PL + LL PP P S C
Sbjct: 62 PPASSLRPPTSSLHPPTSSLRPPTSSLCPATSSPLPSNLL-----PP----PSISSLCPA 112
Query: 452 SGHPICRTLLPPNKSLTPPSSHAYADHLPSPPALGTAQSGVL 577
S P LLPP +L PP S+ LP P AL S VL
Sbjct: 113 SSSPPPSNLLPPPSNLLPPPSNL----LPPPSALLPLPSSVL 150
Score = 32.0 bits (71), Expect = 6.8
Identities = 19/53 (35%), Positives = 26/53 (48%)
Frame = +2
Query: 401 RTPPASRSPDTSCRCAESGHPICRTLLPPNKSLTPPSSHAYADHLPSPPALGT 559
R P +S P TS S HP +L PP SL P +S +L PP++ +
Sbjct: 61 RPPASSLRPPTS-----SLHPPTSSLRPPTSSLCPATSSPLPSNLLPPPSISS 108
>dbj|BAC86092.1| unnamed protein product [Homo sapiens]
Length = 149
Score = 36.2 bits (82), Expect = 0.36
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 392 AVARTPPASRSPDTSCRCAESGHPICRTLLPPNKSLTPPSSHAYA 526
++ +T A RSP+ SC C+ +G P L PP + +PP +H A
Sbjct: 44 SLGKTGRAVRSPEGSCGCSAAGRP---RLAPPRRWASPPGAHPRA 85
>ref|ZP_00057154.1| COG0172: Seryl-tRNA synthetase [Thermobifida fusca]
Length = 570
Score = 36.2 bits (82), Expect = 0.36
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +2
Query: 245 KVPP*RAGNIPGPQCKRTISRDIHAPSSSLACVHDVTPNKFNPLITRLLAVARTPPAS-- 418
+V P RAG +P + R +H P+SS + V +P F T + + R P S
Sbjct: 38 RVQPRRAGPVP----RGFPRRSLHQPASSPSAVSLCSP-PFCSATTPVRSAGRFPGRSET 92
Query: 419 RSPDTSCRCAESGHPICRTLLPPNKSLTPPSS 514
R + S C G P CRTL P ++S P S+
Sbjct: 93 RRKEGSHSCPRVGPP-CRTLRPRDRSFRPHST 123
>dbj|BAC58076.2| large tegument protein [Cercopithecine herpesvirus 1]
Length = 3326
Score = 35.8 bits (81), Expect = 0.47
Identities = 35/138 (25%), Positives = 53/138 (38%)
Frame = +3
Query: 99 DRPASVPFQALTRPERQSRRCSGPVAVPLRYTRLEQEATPSADNPIRRSRSRHNGPAIYR 278
D P +A RP G V++P R +R + P+ +P++R R R PA+
Sbjct: 2732 DPPPPQTVRAPERPRDDRAPAPGRVSLPRRASR---QGRPAPSSPLQRPRRRAARPAVGS 2788
Query: 279 VLNANAPFPATSMLHPVLLHAFMM*PQINSIRS*HDSSLSHARPLPPGHLTRPAAAPNPG 458
+ N P P P S + ++ + A P PP P AA P
Sbjct: 2789 LTNLADPHPPGPET-----------PTPTSPTANPHATTASATPAPP-----PVAATGPT 2832
Query: 459 TPYAARSYHPTSLSRHRA 512
P + + PT + RA
Sbjct: 2833 RPTSPATPTPTVAAAGRA 2850
