Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001634A_C01 KCC001634A_c01
(1289 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO22242.1| 38 kDa ribosome-associated protein precursor [Chl... 562 0.0
ref|NP_172405.1| RNA-binding protein -related [Arabidopsis thali... 338 e-130
pir||T51863 probable RNA binding protein [imported] - Arabidopsi... 338 e-130
pir||T52072 hypothetical protein g5bf [imported] - Arabidopsis t... 336 e-129
gb|AAL32648.1| g5bf protein [Arabidopsis thaliana] 336 e-129
>gb|AAO22242.1| 38 kDa ribosome-associated protein precursor [Chlamydomonas
reinhardtii]
Length = 401
Score = 562 bits (1449), Expect(2) = 0.0
Identities = 282/282 (100%), Positives = 282/282 (100%)
Frame = +1
Query: 31 MQLNASTCRASAIKAGSRRVQVKVSARFANWRDQVERSAPSTSSYGSSSKYSSSGVESKK 210
MQLNASTCRASAIKAGSRRVQVKVSARFANWRDQVERSAPSTSSYGSSSKYSSSGVESKK
Sbjct: 1 MQLNASTCRASAIKAGSRRVQVKVSARFANWRDQVERSAPSTSSYGSSSKYSSSGVESKK 60
Query: 211 ILLMGGTRFIGLYLARDLIAQGHDVTLFTRGKKKVASEIPDDTPSSFADFSRKVKHIQGD 390
ILLMGGTRFIGLYLARDLIAQGHDVTLFTRGKKKVASEIPDDTPSSFADFSRKVKHIQGD
Sbjct: 61 ILLMGGTRFIGLYLARDLIAQGHDVTLFTRGKKKVASEIPDDTPSSFADFSRKVKHIQGD 120
Query: 391 RMDFPEVERKLAREGFQVVYDINGREAVEVEPVLKGTKSTLEQYIYCSSAGVYLKNDMMP 570
RMDFPEVERKLAREGFQVVYDINGREAVEVEPVLKGTKSTLEQYIYCSSAGVYLKNDMMP
Sbjct: 121 RMDFPEVERKLAREGFQVVYDINGREAVEVEPVLKGTKSTLEQYIYCSSAGVYLKNDMMP 180
Query: 571 HREEDAVDPKSRHKGKLDTEELLRKSGVNFTSIRPVYIYGPLNYNPVEEWFFHRLKAGRP 750
HREEDAVDPKSRHKGKLDTEELLRKSGVNFTSIRPVYIYGPLNYNPVEEWFFHRLKAGRP
Sbjct: 181 HREEDAVDPKSRHKGKLDTEELLRKSGVNFTSIRPVYIYGPLNYNPVEEWFFHRLKAGRP 240
Query: 751 IPVPGSGQQVTQLGHVKDLSTAFVKVLGNKKAARQVYNISGE 876
IPVPGSGQQVTQLGHVKDLSTAFVKVLGNKKAARQVYNISGE
Sbjct: 241 IPVPGSGQQVTQLGHVKDLSTAFVKVLGNKKAARQVYNISGE 282
Score = 248 bits (632), Expect(2) = 0.0
Identities = 118/118 (100%), Positives = 118/118 (100%)
Frame = +2
Query: 881 FVTFDGIAKACAKAMGVPEPELIHYNAKEFDFGKDKAFPMRDQHFFASVDKAMADLDWTP 1060
FVTFDGIAKACAKAMGVPEPELIHYNAKEFDFGKDKAFPMRDQHFFASVDKAMADLDWTP
Sbjct: 284 FVTFDGIAKACAKAMGVPEPELIHYNAKEFDFGKDKAFPMRDQHFFASVDKAMADLDWTP 343
Query: 1061 EFGLVDGLKDSYKKDFGRGTFRKEPNFKCDDMIIEAKKGSSFSAPKAAAAAPSRASWR 1234
EFGLVDGLKDSYKKDFGRGTFRKEPNFKCDDMIIEAKKGSSFSAPKAAAAAPSRASWR
Sbjct: 344 EFGLVDGLKDSYKKDFGRGTFRKEPNFKCDDMIIEAKKGSSFSAPKAAAAAPSRASWR 401
>ref|NP_172405.1| RNA-binding protein -related [Arabidopsis thaliana]
gi|25402537|pir||E86226 hypothetical protein [imported]
- Arabidopsis thaliana gi|4337177|gb|AAD18098.1|
Identical to gb|Y10557 g5bf gene from Arabidopsis
thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
gb|T22425, gb|N64934 and gb|T46767 come from this gene
gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
[Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
[Arabidopsis thaliana] gi|17979099|gb|AAL47493.1|
putative RNA-binding protein [Arabidopsis thaliana]
Length = 378
Score = 338 bits (866), Expect(2) = e-130
Identities = 160/229 (69%), Positives = 193/229 (83%)
Frame = +1
Query: 190 SGVESKKILLMGGTRFIGLYLARDLIAQGHDVTLFTRGKKKVASEIPDDTPSSFADFSRK 369
S KKIL+MGGTRFIGL+L+R L+ +GH VTLFTRGK +A ++P ++ FADFS K
Sbjct: 49 SASSEKKILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSK 108
Query: 370 VKHIQGDRMDFPEVERKLAREGFQVVYDINGREAVEVEPVLKGTKSTLEQYIYCSSAGVY 549
+ H++GDR D+ V+ L+ EGF VVYDINGREA EVEP+L+ LEQYIYCSSAGVY
Sbjct: 109 ILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK-LEQYIYCSSAGVY 167
Query: 550 LKNDMMPHREEDAVDPKSRHKGKLDTEELLRKSGVNFTSIRPVYIYGPLNYNPVEEWFFH 729
LK+D++PH EEDAVDPKSRHKGKL+TE LL+ GVN+TSIRPVYIYGPLNYNPVEEWFFH
Sbjct: 168 LKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFH 227
Query: 730 RLKAGRPIPVPGSGQQVTQLGHVKDLSTAFVKVLGNKKAARQVYNISGE 876
RLKAGRPIPVP SG Q++QLGHVKDL+TAF+ VLGN+KA+R+++NISGE
Sbjct: 228 RLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGE 276
Score = 151 bits (381), Expect(2) = e-130
Identities = 70/97 (72%), Positives = 78/97 (80%)
Frame = +2
Query: 881 FVTFDGIAKACAKAMGVPEPELIHYNAKEFDFGKDKAFPMRDQHFFASVDKAMADLDWTP 1060
+VTFDG+AKACAKA G PEPE++HYN KEFDFGK KAFP RDQHFFASV+KA L W P
Sbjct: 278 YVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKP 337
Query: 1061 EFGLVDGLKDSYKKDFGRGTFRKEPNFKCDDMIIEAK 1171
EF LV+GL DSY DFGRGTFRKE +F DDMI+ K
Sbjct: 338 EFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKK 374
>pir||T51863 probable RNA binding protein [imported] - Arabidopsis thaliana
gi|3850621|emb|CAA75602.1| putative RNA binding protein
[Arabidopsis thaliana]
Length = 374
Score = 338 bits (866), Expect(2) = e-130
Identities = 160/229 (69%), Positives = 193/229 (83%)
Frame = +1
Query: 190 SGVESKKILLMGGTRFIGLYLARDLIAQGHDVTLFTRGKKKVASEIPDDTPSSFADFSRK 369
S KKIL+MGGTRFIGL+L+R L+ +GH VTLFTRGK +A ++P ++ FADFS K
Sbjct: 45 SASSEKKILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSK 104
Query: 370 VKHIQGDRMDFPEVERKLAREGFQVVYDINGREAVEVEPVLKGTKSTLEQYIYCSSAGVY 549
+ H++GDR D+ V+ L+ EGF VVYDINGREA EVEP+L+ LEQYIYCSSAGVY
Sbjct: 105 ILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK-LEQYIYCSSAGVY 163
Query: 550 LKNDMMPHREEDAVDPKSRHKGKLDTEELLRKSGVNFTSIRPVYIYGPLNYNPVEEWFFH 729
LK+D++PH EEDAVDPKSRHKGKL+TE LL+ GVN+TSIRPVYIYGPLNYNPVEEWFFH
Sbjct: 164 LKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFH 223
Query: 730 RLKAGRPIPVPGSGQQVTQLGHVKDLSTAFVKVLGNKKAARQVYNISGE 876
RLKAGRPIPVP SG Q++QLGHVKDL+TAF+ VLGN+KA+R+++NISGE
Sbjct: 224 RLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGE 272
Score = 151 bits (381), Expect(2) = e-130
Identities = 70/97 (72%), Positives = 78/97 (80%)
Frame = +2
Query: 881 FVTFDGIAKACAKAMGVPEPELIHYNAKEFDFGKDKAFPMRDQHFFASVDKAMADLDWTP 1060
+VTFDG+AKACAKA G PEPE++HYN KEFDFGK KAFP RDQHFFASV+KA L W P
Sbjct: 274 YVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKP 333
Query: 1061 EFGLVDGLKDSYKKDFGRGTFRKEPNFKCDDMIIEAK 1171
EF LV+GL DSY DFGRGTFRKE +F DDMI+ K
Sbjct: 334 EFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKK 370
>pir||T52072 hypothetical protein g5bf [imported] - Arabidopsis thaliana
gi|2765081|emb|CAA71589.1| g5bf [Arabidopsis thaliana]
Length = 378
Score = 336 bits (862), Expect(2) = e-129
Identities = 160/229 (69%), Positives = 192/229 (82%)
Frame = +1
Query: 190 SGVESKKILLMGGTRFIGLYLARDLIAQGHDVTLFTRGKKKVASEIPDDTPSSFADFSRK 369
S KKIL+MGGTRFIGL+L+R L+ +GH VTLFTRGK +A ++P ++ FADFS K
Sbjct: 49 SASSEKKILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSK 108
Query: 370 VKHIQGDRMDFPEVERKLAREGFQVVYDINGREAVEVEPVLKGTKSTLEQYIYCSSAGVY 549
+ H++GDR D+ V+ L+ EGF VVYDINGREA EVEP+L+ LEQYIYCSSAGVY
Sbjct: 109 ILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK-LEQYIYCSSAGVY 167
Query: 550 LKNDMMPHREEDAVDPKSRHKGKLDTEELLRKSGVNFTSIRPVYIYGPLNYNPVEEWFFH 729
LK D++PH EEDAVDPKSRHKGKL+TE LL+ GVN+TSIRPVYIYGPLNYNPVEEWFFH
Sbjct: 168 LKFDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFH 227
Query: 730 RLKAGRPIPVPGSGQQVTQLGHVKDLSTAFVKVLGNKKAARQVYNISGE 876
RLKAGRPIPVP SG Q++QLGHVKDL+TAF+ VLGN+KA+R+++NISGE
Sbjct: 228 RLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGE 276
Score = 151 bits (381), Expect(2) = e-129
Identities = 70/97 (72%), Positives = 78/97 (80%)
Frame = +2
Query: 881 FVTFDGIAKACAKAMGVPEPELIHYNAKEFDFGKDKAFPMRDQHFFASVDKAMADLDWTP 1060
+VTFDG+AKACAKA G PEPE++HYN KEFDFGK KAFP RDQHFFASV+KA L W P
Sbjct: 278 YVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKP 337
Query: 1061 EFGLVDGLKDSYKKDFGRGTFRKEPNFKCDDMIIEAK 1171
EF LV+GL DSY DFGRGTFRKE +F DDMI+ K
Sbjct: 338 EFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKK 374
>gb|AAL32648.1| g5bf protein [Arabidopsis thaliana]
Length = 378
Score = 336 bits (862), Expect(2) = e-129
Identities = 159/229 (69%), Positives = 193/229 (83%)
Frame = +1
Query: 190 SGVESKKILLMGGTRFIGLYLARDLIAQGHDVTLFTRGKKKVASEIPDDTPSSFADFSRK 369
S KKIL+MGGTRFIGL+L+R L+ +GH VTLFTRGK +A ++P ++ FADFS K
Sbjct: 49 SASSEKKILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSK 108
Query: 370 VKHIQGDRMDFPEVERKLAREGFQVVYDINGREAVEVEPVLKGTKSTLEQYIYCSSAGVY 549
+ H++GDR D+ V+ L+ EGF VVYDINGREA EVEP+L+ LEQYIYCSSAGVY
Sbjct: 109 ILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK-LEQYIYCSSAGVY 167
Query: 550 LKNDMMPHREEDAVDPKSRHKGKLDTEELLRKSGVNFTSIRPVYIYGPLNYNPVEEWFFH 729
LK+D++PH EEDAVDPKSRHKGKL+TE LL+ GVN+TSIRPVYIYGPLNYNPVE+WFFH
Sbjct: 168 LKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEKWFFH 227
Query: 730 RLKAGRPIPVPGSGQQVTQLGHVKDLSTAFVKVLGNKKAARQVYNISGE 876
RLKAGRPIPVP SG Q++QLGHVKDL+TAF+ VLGN+KA+R+++NISGE
Sbjct: 228 RLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGE 276
Score = 151 bits (381), Expect(2) = e-129
Identities = 70/97 (72%), Positives = 78/97 (80%)
Frame = +2
Query: 881 FVTFDGIAKACAKAMGVPEPELIHYNAKEFDFGKDKAFPMRDQHFFASVDKAMADLDWTP 1060
+VTFDG+AKACAKA G PEPE++HYN KEFDFGK KAFP RDQHFFASV+KA L W P
Sbjct: 278 YVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKP 337
Query: 1061 EFGLVDGLKDSYKKDFGRGTFRKEPNFKCDDMIIEAK 1171
EF LV+GL DSY DFGRGTFRKE +F DDMI+ K
Sbjct: 338 EFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKK 374
