KCC001632A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001632A_C01 KCC001632A_c01
gagagagagagaactagtctcgagttttttttttttttttttCTGCCTAGTCCACTTTTA
CACATGCGGCGCCACACCGGCCCGATTACCAACAAAATTGGGCGGCTGGACATCCCTCCC
GCAATCACACAATCACACACGTACGCTAGCCTCCTAGCAGCTTCACCAGCGGCCCGCACC
CACGCACATCCTGCCGCGGCCTCCCGCACCCCACACCGCCAGCACCACACACCGCCAGCG
TCACACACACCGCCAGCAGCACGCCAGAAAGATCACTGCACCACTCAGCGCACCCGGGAG
GCCCTGCCCCCAACCCCTCGCCGCCACTGACACCAACACCGACCCAAACACACACGCCTG
CGCCGGCATCGCTGCCGACGCCCCGCGTCACGCCATCATCCAAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001632A_C01 KCC001632A_c01
         (404 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P19275|VTP3_TTV1V VIRAL PROTEIN TPX gi|93198|pir||S15921 prot...    60  6e-09
ref|NP_046248.1| unknown [Orgyia pseudotsugata multicapsid nucle...    60  9e-09
pir||T31337 1,4-beta-glucanase (EC 3.2.1.-) - Anaerocellum therm...    59  2e-08
ref|NP_848394.1| unknown [Choristoneura fumiferana MNPV] gi|3027...    58  4e-08
gb|AAQ91707.1| unknown [Choristoneura fumiferana defective nucle...    57  6e-08

>sp|P19275|VTP3_TTV1V VIRAL PROTEIN TPX gi|93198|pir||S15921 protein TPX-VT3 -
           Thermoproteus phage 1 (strain strain KRA1 10/12)
           gi|584349|emb|CAA32838.1| unnamed protein product
           [Thermoproteus tenax virus 1]
          Length = 474

 Score = 60.5 bits (145), Expect = 6e-09
 Identities = 34/95 (35%), Positives = 44/95 (45%)
 Frame = +3

Query: 114 PSRNHTITHVR*PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAH 293
           P+   T T    P  + T  P P  +    P PTP    T + T T + TP   + +   
Sbjct: 316 PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTYDITYVVF 375

Query: 294 PGGPAPNPSPPLTPTPTQTHTPAPASLPTPRVTPS 398
              P+P P+P  TPTPT T TP P   PTP  TP+
Sbjct: 376 DVTPSPTPTPTPTPTPTPTPTPTPTPTPTPTPTPT 410

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 34/95 (35%), Positives = 43/95 (44%)
 Frame = +3

Query: 114 PSRNHTITHVR*PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAH 293
           P    T+T +  P  + T  P P  +    P PTP    T + T T + TP  +      
Sbjct: 264 PDPQVTVTPISSPSPTPTPTPTPTPT----PTPTPTPTPTPTPTPTPTPTPTPT------ 313

Query: 294 PGGPAPNPSPPLTPTPTQTHTPAPASLPTPRVTPS 398
              P P P+P  TPTPT T TP P   PTP  TP+
Sbjct: 314 ---PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPT 345

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 33/97 (34%), Positives = 42/97 (43%)
 Frame = +3

Query: 114 PSRNHTITHVR*PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAH 293
           P+   T T    P  + T  P P  +    P PTP    T + T T + TP   + +   
Sbjct: 385 PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTYDITYVIF 444

Query: 294 PGGPAPNPSPPLTPTPTQTHTPAPASLPTPRVTPSSN 404
              P+P P+P  TPTPT T        PTP  T SSN
Sbjct: 445 DVTPSPTPTPTPTPTPTPT--------PTPTSTTSSN 473

>ref|NP_046248.1| unknown [Orgyia pseudotsugata multicapsid nucleopolyhedrovirus]
           gi|2493240|sp|O10341|Y091_NPVOP HYPOTHETICAL 29.3 KD
           PROTEIN (ORF92) gi|7515481|pir||T10361 hypothetical
           protein 92 - Orgyia pseudotsugata nuclear polyhedrosis
           virus gi|1911338|gb|AAC59091.1| unknown [Orgyia
           pseudotsugata multicapsid nucleopolyhedrovirus]
          Length = 279

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 37/95 (38%), Positives = 44/95 (45%)
 Frame = +3

Query: 114 PSRNHTITHVR*PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAH 293
           PS   T +    P  S T  P P  S    P PTP    T S T T S TP  +      
Sbjct: 91  PSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPTPSPTPSPT------ 144

Query: 294 PGGPAPNPSPPLTPTPTQTHTPAPASLPTPRVTPS 398
              P+P P+P  TP+PT T +P P+  PTP  TPS
Sbjct: 145 ---PSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPS 176

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 36/95 (37%), Positives = 45/95 (46%)
 Frame = +3

Query: 114 PSRNHTITHVR*PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAH 293
           PS   T T    P  + T  P P  +    P P+P    T S T T S TP  +    + 
Sbjct: 51  PSPTPTPTPTPTPTPTPTPSPTPTPALSPTPTPSPTLSPTPSPTPTPSPTPSPT---PSP 107

Query: 294 PGGPAPNPSPPLTPTPTQTHTPAPASLPTPRVTPS 398
              P+P PSP  TP+PT + TP P+  PTP  TPS
Sbjct: 108 TPTPSPTPSPTPTPSPTPSPTPTPSPTPTPSPTPS 142

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 33/83 (39%), Positives = 41/83 (48%)
 Frame = +3

Query: 150 PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAHPGGPAPNPSPPL 329
           P  + T  P P  +    P PTP    T + T T S TP  +L        P P PSP L
Sbjct: 35  PSPTPTPTPSPTPTPTPSPTPTPTPTPTPTPTPTPSPTPTPAL-------SPTPTPSPTL 87

Query: 330 TPTPTQTHTPAPASLPTPRVTPS 398
           +PTP+ T TP+P   PTP  TP+
Sbjct: 88  SPTPSPTPTPSPTPSPTPSPTPT 110

 Score = 57.4 bits (137), Expect = 5e-08
 Identities = 35/103 (33%), Positives = 49/103 (46%)
 Frame = +3

Query: 90  QQNWAAGHPSRNHTITHVR*PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPE 269
           +QN     P  + T T    P  + T  P P  +    P PTP    T +   + + TP 
Sbjct: 25  KQNIETKPPLPSPTPTPTPSPTPTPTPSPTPTPTPTPTPTPTPTPSPTPTPALSPTPTPS 84

Query: 270 RSLHHSAHPGGPAPNPSPPLTPTPTQTHTPAPASLPTPRVTPS 398
            +L  +  P  P P+P+P  TP+PT T +P P+  PTP  TPS
Sbjct: 85  PTLSPTPSP-TPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPS 126

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 36/83 (43%), Positives = 40/83 (47%), Gaps = 1/83 (1%)
 Frame = +3

Query: 150 PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAHPGG-PAPNPSPP 326
           P  S T  P P  S    P PTP    T S T T S TP  S   S  P   P P+P+P 
Sbjct: 99  PTPSPTPSPTPTPS--PTPSPTPTPSPTPSPTPTPSPTPTPSPTPSPTPSPTPTPSPTPS 156

Query: 327 LTPTPTQTHTPAPASLPTPRVTP 395
            TPTP+ T +P P   PTP  TP
Sbjct: 157 PTPTPSPTPSPTPTPSPTPSPTP 179

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 39/102 (38%), Positives = 47/102 (45%), Gaps = 6/102 (5%)
 Frame = +3

Query: 114 PSRNHTITHVR*PPSSFTSGPHPRTSCRGLPHPTP-----PAPHTASVTHTASSTPERSL 278
           PS   + T    P  S T  P P  S    P PTP     P+P T S T T S TP  + 
Sbjct: 101 PSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPTPSPTPSP-TPSPTPTPSPTPSPTP 159

Query: 279 HHSAHPGG-PAPNPSPPLTPTPTQTHTPAPASLPTPRVTPSS 401
             S  P   P P+P+P  TP P+ T  P+P+ L  P   PSS
Sbjct: 160 TPSPTPSPTPTPSPTPSPTPPPSPTPPPSPSPLGDPMYFPSS 201

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +3

Query: 273 SLHHSAHPGGPAPNPSPPLTPTPTQTHTPAPASLPTPRVTPS 398
           SL  +     P P+P+P  TP+PT T TP+P   PTP  TP+
Sbjct: 23  SLKQNIETKPPLPSPTPTPTPSPTPTPTPSPTPTPTPTPTPT 64

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 29/78 (37%), Positives = 36/78 (45%), Gaps = 1/78 (1%)
 Frame = +3

Query: 150 PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAHPGG-PAPNPSPP 326
           P  S T  P P  S    P PTP    T S T T S TP  +   S  P   P P+P+PP
Sbjct: 129 PTPSPTPTPSPTPS--PTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPPPSPTPP 186

Query: 327 LTPTPTQTHTPAPASLPT 380
            +P+P       P+S+ T
Sbjct: 187 PSPSPLGDPMYFPSSVGT 204

>pir||T31337 1,4-beta-glucanase (EC 3.2.1.-) - Anaerocellum thermophilum
           (fragment) gi|2437819|emb|CAB06786.1| 1,4-beta-glucanase
           [Anaerocellum thermophilum]
          Length = 1711

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 32/79 (40%), Positives = 39/79 (48%)
 Frame = +3

Query: 165 TSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAHPGGPAPNPSPPLTPTPT 344
           TSG  P  +    P PTP    T + T T+++TP              P P+P +TPTPT
Sbjct: 615 TSGATPTPTATATPTPTPTVTPTPTPTPTSTATP-------------TPTPTPTVTPTPT 661

Query: 345 QTHTPAPASLPTPRVTPSS 401
            T T  P S PTP  TPSS
Sbjct: 662 PTPTATPTSTPTPTSTPSS 680

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 19/33 (57%), Positives = 21/33 (63%)
 Frame = +3

Query: 303 PAPNPSPPLTPTPTQTHTPAPASLPTPRVTPSS 401
           PAP  +P  TPTPT T T  P + PTP  TPSS
Sbjct: 847 PAPTVTPTPTPTPTSTPTATPTATPTPTPTPSS 879

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 19/33 (57%), Positives = 21/33 (63%)
 Frame = +3

Query: 303  PAPNPSPPLTPTPTQTHTPAPASLPTPRVTPSS 401
            PAP  +P  TPTPT T T  P + PTP  TPSS
Sbjct: 1046 PAPTVTPTPTPTPTSTPTATPTATPTPTPTPSS 1078

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 20/55 (36%), Positives = 26/55 (46%)
 Frame = +3

Query: 234  ASVTHTASSTPERSLHHSAHPGGPAPNPSPPLTPTPTQTHTPAPASLPTPRVTPS 398
            +  T T ++TP  ++          P P+P  T TPT T T  P   PTP  TPS
Sbjct: 1036 SGATPTPTATPAPTV---------TPTPTPTPTSTPTATPTATPTPTPTPSSTPS 1081

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 315  PSPPLTPTPTQTHTPAPASLPTPRVTPSS 401
            P+P  TP PT T TP P    TP  TP++
Sbjct: 1040 PTPTATPAPTVTPTPTPTPTSTPTATPTA 1068

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 17/37 (45%), Positives = 19/37 (50%), Gaps = 2/37 (5%)
 Frame = +3

Query: 294 PGGPAPNPSPPL--TPTPTQTHTPAPASLPTPRVTPS 398
           PG     P+P    TPTPT T TP P   PT   TP+
Sbjct: 613 PGTSGATPTPTATATPTPTPTVTPTPTPTPTSTATPT 649

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 315 PSPPLTPTPTQTHTPAPASLPTPRVTPSS 401
           P+P  TP PT T TP P    TP  TP++
Sbjct: 841 PTPTATPAPTVTPTPTPTPTSTPTATPTA 869

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +3

Query: 234 ASVTHTASSTPERSLHHSAHPGGPAPNPSPPLTPTPTQTHTPAPASLPTPRVTP 395
           +  T T ++TP  ++          P P+P  T TPT T T  P   PTP  TP
Sbjct: 837 SGATPTPTATPAPTV---------TPTPTPTPTSTPTATPTATPTPTPTPSSTP 881

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 17/37 (45%), Positives = 19/37 (50%), Gaps = 2/37 (5%)
 Frame = +3

Query: 294  PGGPAPNPSPPLTPTPTQTHTPAPASLP--TPRVTPS 398
            P G  P P+    PT T T TP P S P  TP  TP+
Sbjct: 1035 PSGATPTPTATPAPTVTPTPTPTPTSTPTATPTATPT 1071

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 17/37 (45%), Positives = 19/37 (50%), Gaps = 2/37 (5%)
 Frame = +3

Query: 294 PGGPAPNPSPPLTPTPTQTHTPAPASLP--TPRVTPS 398
           P G  P P+    PT T T TP P S P  TP  TP+
Sbjct: 836 PSGATPTPTATPAPTVTPTPTPTPTSTPTATPTATPT 872

 Score = 34.3 bits (77), Expect = 0.42
 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +3

Query: 225  PHTASVTHTASSTPERSLHHSAHPGGPAPNPSPPLTPT--PTQTHTPAPASLPTPRV 389
            P  A+ T TA+  P  +         P P P+P  TPT  PT T TP P    TP V
Sbjct: 1035 PSGATPTPTATPAPTVT---------PTPTPTPTSTPTATPTATPTPTPTPSSTPSV 1082

 Score = 33.9 bits (76), Expect = 0.55
 Identities = 26/88 (29%), Positives = 33/88 (36%)
 Frame = +3

Query: 114 PSRNHTITHVR*PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAH 293
           P+   T T    P  + T  P P ++    P PTP      +VT                
Sbjct: 620 PTPTATATPTPTPTVTPTPTPTPTSTATPTPTPTP------TVT---------------- 657

Query: 294 PGGPAPNPSPPLTPTPTQTHTPAPASLP 377
              P P P+P  TPT T T T  P+S P
Sbjct: 658 ---PTPTPTPTATPTSTPTPTSTPSSTP 682

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 15/26 (57%), Positives = 16/26 (60%)
 Frame = +3

Query: 324  PLTPTPTQTHTPAPASLPTPRVTPSS 401
            P   TPT T TPAP   PTP  TP+S
Sbjct: 1035 PSGATPTPTATPAPTVTPTPTPTPTS 1060

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 15/26 (57%), Positives = 16/26 (60%)
 Frame = +3

Query: 324 PLTPTPTQTHTPAPASLPTPRVTPSS 401
           P   TPT T TPAP   PTP  TP+S
Sbjct: 836 PSGATPTPTATPAPTVTPTPTPTPTS 861

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 18/55 (32%), Positives = 25/55 (44%)
 Frame = +3

Query: 102 AAGHPSRNHTITHVR*PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTP 266
           A   P+   T+T    P  + T+ P P  +    P PTP    T + T T +STP
Sbjct: 624 ATATPTPTPTVTPTPTPTPTSTATPTPTPTPTVTPTPTPTPTATPTSTPTPTSTP 678

>ref|NP_848394.1| unknown [Choristoneura fumiferana MNPV] gi|30270049|gb|AAP29865.1|
           unknown [Choristoneura fumiferana MNPV]
          Length = 251

 Score = 57.8 bits (138), Expect = 4e-08
 Identities = 34/84 (40%), Positives = 44/84 (51%), Gaps = 1/84 (1%)
 Frame = +3

Query: 150 PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAHPG-GPAPNPSPP 326
           PP + +  P P  S    P P+P  P T S T     TP  +L  +  P   P P+P+PP
Sbjct: 47  PPPTPSPTPPPTPSPTPPPTPSPTPPPTPSPT--PPPTPSPTLPPTPSPTLPPTPSPTPP 104

Query: 327 LTPTPTQTHTPAPASLPTPRVTPS 398
            TP+PT + TP+P   PTP  TPS
Sbjct: 105 PTPSPTPSPTPSPTPSPTPSPTPS 128

 Score = 57.8 bits (138), Expect = 4e-08
 Identities = 32/83 (38%), Positives = 42/83 (50%)
 Frame = +3

Query: 150 PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAHPGGPAPNPSPPL 329
           P  S T  P P  +    P PTPP   + + + T S TP  +    +    P P+P+P  
Sbjct: 81  PTPSPTLPPTPSPTLPPTPSPTPPPTPSPTPSPTPSPTPSPT---PSPTPSPTPSPTPSA 137

Query: 330 TPTPTQTHTPAPASLPTPRVTPS 398
           TP+PT + TP P S PTP  TPS
Sbjct: 138 TPSPTPSATPLPTSSPTPPPTPS 160

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 32/84 (38%), Positives = 43/84 (51%)
 Frame = +3

Query: 150 PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAHPGGPAPNPSPPL 329
           PP + +  P P  S    P P+P  P T S T   + +P      S  P  P P+P+P  
Sbjct: 55  PPPTPSPTPPPTPSPTPPPTPSPTPPPTPSPTLPPTPSPTLPPTPSPTPP-PTPSPTPSP 113

Query: 330 TPTPTQTHTPAPASLPTPRVTPSS 401
           TP+PT + TP+P   PTP  TPS+
Sbjct: 114 TPSPTPSPTPSPTPSPTPSPTPSA 137

 Score = 53.1 bits (126), Expect = 9e-07
 Identities = 31/84 (36%), Positives = 42/84 (49%)
 Frame = +3

Query: 150 PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAHPGGPAPNPSPPL 329
           PP + +  P P  S    P P+P  P T S T   + +P      S  P  P P+P+P  
Sbjct: 63  PPPTPSPTPPPTPSPTPPPTPSPTLPPTPSPTLPPTPSPTPPPTPSPTPS-PTPSPTPSP 121

Query: 330 TPTPTQTHTPAPASLPTPRVTPSS 401
           TP+PT + TP+P    TP  TPS+
Sbjct: 122 TPSPTPSPTPSPTPSATPSPTPSA 145

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 18/32 (56%), Positives = 20/32 (62%)
 Frame = +3

Query: 303 PAPNPSPPLTPTPTQTHTPAPASLPTPRVTPS 398
           P P P+PP TP PT + TP P   PTP  TPS
Sbjct: 37  PTPPPTPPPTPPPTPSPTPPPTPSPTPPPTPS 68

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 17/31 (54%), Positives = 20/31 (63%)
 Frame = +3

Query: 303 PAPNPSPPLTPTPTQTHTPAPASLPTPRVTP 395
           P P P+PP TP+PT   TP+P   PTP  TP
Sbjct: 41  PTPPPTPPPTPSPTPPPTPSPTPPPTPSPTP 71

 Score = 40.0 bits (92), Expect = 0.008
 Identities = 17/31 (54%), Positives = 19/31 (60%)
 Frame = +3

Query: 303 PAPNPSPPLTPTPTQTHTPAPASLPTPRVTP 395
           P P P+PP TP PT   TP+P   PTP  TP
Sbjct: 33  PTPWPTPPPTPPPTPPPTPSPTPPPTPSPTP 63

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +3

Query: 303 PAPNPSPPLTPTPTQTHTPAPASLPTPRVTPS 398
           P P P+P  TP PT + TP P   PTP  TPS
Sbjct: 45  PTPPPTPSPTPPPTPSPTPPPTPSPTPPPTPS 76

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 15/28 (53%), Positives = 16/28 (56%)
 Frame = +3

Query: 315 PSPPLTPTPTQTHTPAPASLPTPRVTPS 398
           P+P  TP PT   TP P   PTP  TPS
Sbjct: 33  PTPWPTPPPTPPPTPPPTPSPTPPPTPS 60

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = +3

Query: 312 NPSPPLTPTPTQTHTPAPASLPTPRVTP 395
           N   P TP PT   TP P   PTP  TP
Sbjct: 28  NKELPPTPWPTPPPTPPPTPPPTPSPTP 55

>gb|AAQ91707.1| unknown [Choristoneura fumiferana defective nucleopolyhedrovirus]
          Length = 218

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 36/92 (39%), Positives = 47/92 (50%), Gaps = 2/92 (2%)
 Frame = +3

Query: 129 TITHVR*PPS-SFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAHPG-G 302
           T+  V  PP+ S T  P P       P PTPP   + + + T S TP  +   +  P   
Sbjct: 23  TLKRVPEPPTPSPTPSPTP-------PSPTPPPTPSPTPSPTPSPTPSPTPPPTPLPTPS 75

Query: 303 PAPNPSPPLTPTPTQTHTPAPASLPTPRVTPS 398
           P P+P+PP TP PT + TP+P   PTP  TPS
Sbjct: 76  PTPSPTPPPTPLPTPSPTPSPTPSPTPSPTPS 107

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 31/87 (35%), Positives = 41/87 (46%), Gaps = 4/87 (4%)
 Frame = +3

Query: 150 PPSSF---TSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAHPG-GPAPNP 317
           PPS     T  P P  +    P PTPP     + + T S TP  +   +  P   P P+P
Sbjct: 41  PPSPTPPPTPSPTPSPTPSPTPSPTPPPTPLPTPSPTPSPTPPPTPLPTPSPTPSPTPSP 100

Query: 318 SPPLTPTPTQTHTPAPASLPTPRVTPS 398
           +P  TP+PT   TP+P   P+P   PS
Sbjct: 101 TPSPTPSPTPPPTPSPTPTPSPTPPPS 127

 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 29/82 (35%), Positives = 37/82 (44%)
 Frame = +3

Query: 150 PPSSFTSGPHPRTSCRGLPHPTPPAPHTASVTHTASSTPERSLHHSAHPGGPAPNPSPPL 329
           P  S T  P P  +    P PTPP     + + T S TP  +         P P+P+PP 
Sbjct: 60  PTPSPTPPPTPLPTPSPTPSPTPPPTPLPTPSPTPSPTPSPT-------PSPTPSPTPPP 112

Query: 330 TPTPTQTHTPAPASLPTPRVTP 395
           TP+PT T +P P   P P   P
Sbjct: 113 TPSPTPTPSPTPPPSPEPLGEP 134



EST assemble image


clone accession position
1 LC014a08_r AV619850 1 407
2 LC097g03_r AV625779 43 400
3 CM072b06_r AV391465 45 542
4 LC094g07_r AV625571 53 269




Chlamydomonas reinhardtii
Kazusa DNA Research Institute