Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001617A_C01 KCC001617A_c01
(1011 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB91333.1| chloroplast ppGpp synthase/degradase [Chlamydomo... 49 1e-04
ref|NP_862383.1| putative transcriptional activator [Micrococcus... 37 0.54
dbj|BAA90395.1| unnamed protein product [Oryza sativa (japonica ... 37 0.71
emb|CAC39391.1| hunchback [Musca domestica] 36 0.92
ref|XP_286640.1| hypothetical protein XP_286640 [Mus musculus] 36 1.2
>dbj|BAB91333.1| chloroplast ppGpp synthase/degradase [Chlamydomonas reinhardtii]
Length = 735
Score = 48.9 bits (115), Expect = 1e-04
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 RDGMTTWSMGPNAGAAVPAGM 64
RDGMTTWSMGPNAGAAVPAGM
Sbjct: 715 RDGMTTWSMGPNAGAAVPAGM 735
>ref|NP_862383.1| putative transcriptional activator [Micrococcus sp. 28]
gi|18025367|gb|AAK62475.1| putative transcriptional
activator [Micrococcus sp. 28]
Length = 241
Score = 37.0 bits (84), Expect = 0.54
Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Frame = -3
Query: 277 PASR---SAHERQDCGAADSN-------KHGRASGPHVAASRYHYPPHAPAQPAANWQRP 128
PA R S H R+ C AD + RA P A + H+ PH+ +P +RP
Sbjct: 61 PAPRGRPSPHPREGCTHADDGPQRPPMLRGRRALHPRAAQAHRHHGPHS--RPLVRLRRP 118
Query: 127 GDDGQVTARARGAGCCPRMCLHARRHGGACVRAHAPGGHP 8
RA G LH+RR G R PG P
Sbjct: 119 ARGHDHRGRAGGL-------LHSRREGPGGARTGRPGPRP 151
>dbj|BAA90395.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 550
Score = 36.6 bits (83), Expect = 0.71
Identities = 30/94 (31%), Positives = 36/94 (37%), Gaps = 4/94 (4%)
Frame = -3
Query: 283 TCPASRSAHERQDCGAADSNKHGRAS--GPHVAASR--YHYPPHAPAQPAANWQRPGDDG 116
T P+ + R +AD K A PHV SR H P A + G G
Sbjct: 106 TWPSPEGSDARGKSLSADVIKEAGADRRAPHVNGSRESVHRGPGPRGGAAEHGHGSGRPG 165
Query: 115 QVTARARGAGCCPRMCLHARRHGGACVRAHAPGG 14
+ TAR A CC C+ R G R PGG
Sbjct: 166 RATARGGAASCCDGWCM---RESGGEARQWDPGG 196
>emb|CAC39391.1| hunchback [Musca domestica]
Length = 540
Score = 36.2 bits (82), Expect = 0.92
Identities = 35/118 (29%), Positives = 50/118 (41%), Gaps = 5/118 (4%)
Frame = -1
Query: 486 TRTGIDQATRASAQDCKVKLSES*GYTALTQSTCIKRQSVTN*WYKWSRYQALGHIQV*C 307
T T DQ T A + +KLSE G T L S+ R+ K + + GH+Q+
Sbjct: 334 TPTKEDQQTPELAMN--LKLSEEHGETPLFSSSAAARRKGRV--LKLDQEKTAGHLQI-- 387
Query: 306 IHREPRPKHALRPGPHMSGRTAGPRTPTNMGARPA----HTSLRQDIII-HHMHQHNP 148
P+H L M T+ P P+ + A H+S + + HH H HNP
Sbjct: 388 ASAPTSPQHHLHHNNEMPPTTSSPIHPSQVNGVAAGAADHSSADESMETGHHHHHHNP 445
>ref|XP_286640.1| hypothetical protein XP_286640 [Mus musculus]
Length = 142
Score = 35.8 bits (81), Expect = 1.2
Identities = 26/88 (29%), Positives = 34/88 (38%)
Frame = -1
Query: 300 REPRPKHALRPGPHMSGRTAGPRTPTNMGARPAHTSLRQDIIIHHMHQHNPPPIGSGRAT 121
R PR + PGP R A T P SLR + H+ + +PPP S R
Sbjct: 13 RPPRSRRPSSPGPAAPPRPAALEAATAAWRLPPAGSLRSPVPGCHLRRRSPPPAWSRRRA 72
Query: 120 MGR*PRAHAGQAAAHVCAYMPAGTAAPA 37
AG+A + P GT P+
Sbjct: 73 RQPAAGCRAGRARGWASSRCP-GTRGPS 99
