KCC001614A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001614A_C01 KCC001614A_c01
GGGCAGTTAGTTCAGGAGGAACGGCGTGACTTGCAGGGTGTTTCTTGGTGCTGGGGCTAG
GCCTGCAAAGCGAAAGGGACGCACCCAACGACCGCCGGACTGGTGATTTCGTAAGCGGCG
CGAACATTAATTGGCTGACAGGCAGGGGGAAATCCGGTGGTAACGGAAGCCCTACTGGGC
TTGCGTCGCCTCAGACACCGCAGTCCTGCATACGGCGTGCATCTGCATCCGAGGTTGGGT
GACAGGGCGAGGTGCTTCAACTGTCTGGTCTGGTGGAGGAGCCTAGCTACTTTTTACCTC
AATTCGGTTAAGGGTATGGTTGAAGTCTGTTGGAGAGCACCGCCGCCTGCTGATGGACAC
ATGCATGGGCTGCATTATGGTTGTGCGACGCTGCGAGCATGGCGGCACACGCACGTGCGC
TGCTCAAGGGGCGCCTGTGCGCCGCTGTCAAGCAGATCGACGCTGGCAGGCAGTAGGCAT
GATGGAGATAGGATGCGAAGAGGCCATGCGGCGGTAATAAATTGCGGCGCCAACCAACAC
GGTCGGGGAGCTCTGGCGGGGATGATGCATGCAGGCAGGTATGGTAAGGGCCACTGCTGC
CCCTTACCCTGTCGACTGTGGGCATGCTGCTGCAAGCATGGTTGACGAATACAGCATTGA
CAACGTCATCGTGCAAGTTAATCCACGTCGTGGTGTGTTGTGGTGTGCGTGTGTATGTGT
ACAAGTATGTTATGTGCTGCGTGCCGTATAGAGAGTGACAAAAGCACTGGTGCAGTAAGG
CTGGGCTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001614A_C01 KCC001614A_c01
         (788 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC04669.1| unnamed protein product [Homo sapiens]                 39  0.12
ref|NP_115763.2| protein kinase, lysine deficient 4; putative pr...    39  0.12
emb|CAC48387.1| serine/threonine protein kinase [Homo sapiens]         39  0.12
gb|AAB92649.1| replicase protein [Turnip yellow mosaic virus]          37  0.36
dbj|BAB89174.1| B1168H06.13 [Oryza sativa (japonica cultivar-gro...    36  0.61

>dbj|BAC04669.1| unnamed protein product [Homo sapiens]
          Length = 620

 Score = 38.5 bits (88), Expect = 0.12
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
 Frame = -2

Query: 256 STSPCHPTSDADARRMQDCGV*GDASPVGLPLP-----PDFPLPVSQLMF------APLT 110
           ++ PCHP+    +             P   PLP     P+FP+P+SQ  +      +P T
Sbjct: 287 TSPPCHPSPSPFSPISSQVSSNPSPHPTSSPLPFSSSTPEFPVPLSQCPWSSLPTTSPPT 346

Query: 109 KSPVRRSLGASLSLCRPSPSTKKHPASHAVP 17
            SP    +  S     P PST   P++ A P
Sbjct: 347 FSPTCSQVTLSSPFFPPCPSTSSFPSTTAAP 377

>ref|NP_115763.2| protein kinase, lysine deficient 4; putative protein kinase WNK4
            [Homo sapiens] gi|15212448|gb|AAK91995.1|AF390018_1
            putative protein kinase WNK4 [Homo sapiens]
          Length = 1243

 Score = 38.5 bits (88), Expect = 0.12
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
 Frame = -2

Query: 256  STSPCHPTSDADARRMQDCGV*GDASPVGLPLP-----PDFPLPVSQLMF------APLT 110
            ++ PCHP+    +             P   PLP     P+FP+P+SQ  +      +P T
Sbjct: 832  TSPPCHPSPSPFSPISSQVSSNPSPHPTSSPLPFSSSTPEFPVPLSQCPWSSLPTTSPPT 891

Query: 109  KSPVRRSLGASLSLCRPSPSTKKHPASHAVP 17
             SP    +  S     P PST   P++ A P
Sbjct: 892  FSPTCSQVTLSSPFFPPCPSTSSFPSTTAAP 922

>emb|CAC48387.1| serine/threonine protein kinase [Homo sapiens]
          Length = 1231

 Score = 38.5 bits (88), Expect = 0.12
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
 Frame = -2

Query: 256  STSPCHPTSDADARRMQDCGV*GDASPVGLPLP-----PDFPLPVSQLMF------APLT 110
            ++ PCHP+    +             P   PLP     P+FP+P+SQ  +      +P T
Sbjct: 820  TSPPCHPSPSPFSPISSQVSSNPSPHPTSSPLPFSSSTPEFPVPLSQCPWSSLPTTSPPT 879

Query: 109  KSPVRRSLGASLSLCRPSPSTKKHPASHAVP 17
             SP    +  S     P PST   P++ A P
Sbjct: 880  FSPTCSQVTLSSPFFPPCPSTSSFPSTTAAP 910

>gb|AAB92649.1| replicase protein [Turnip yellow mosaic virus]
          Length = 1844

 Score = 37.0 bits (84), Expect = 0.36
 Identities = 31/84 (36%), Positives = 38/84 (44%)
 Frame = -2

Query: 253 TSPCHPTSDADARRMQDCGV*GDASPVGLPLPPDFPLPVSQLMFAPLTKSPVRRSLGASL 74
           TSP   TS  D+    D  +        LP PP  PLP SQL+ APLT  P   ++G  L
Sbjct: 690 TSPPPSTSHQDSTDPADPLMGSHLLHHSLPAPPTHPLPSSQLLPAPLTNDPT--AIGPVL 747

Query: 73  SLCRPSPSTKKHPASHAVPPELTA 2
                 P  + HP  +   PE TA
Sbjct: 748 ------PFEELHPRKY---PENTA 762

>dbj|BAB89174.1| B1168H06.13 [Oryza sativa (japonica cultivar-group)]
           gi|20521453|dbj|BAB91962.1| B1003B09.18 [Oryza sativa
           (japonica cultivar-group)]
          Length = 527

 Score = 36.2 bits (82), Expect = 0.61
 Identities = 26/89 (29%), Positives = 37/89 (41%)
 Frame = +2

Query: 14  RRNGVTCRVFLGAGARPAKRKGRTQRPPDW*FRKRREH*LADRQGEIRW*RKPYWACVAS 193
           R  G    VF+G G   + R+GR +    W   +RR        G I    +  W  +  
Sbjct: 371 RGRGGAGMVFIGLGGGDSGREGRIRGGNWWEVGRRR----GGNGGRIS---RGKWGKLTR 423

Query: 194 DTAVLHTACICIRGWVTGRGASTVWSGGG 280
           +  V     +C RG  TG G + +WSG G
Sbjct: 424 EEEVGGDRIVCARGSYTGTGGAAMWSGFG 452



EST assemble image


clone accession position
1 HC075f06_r AV637635 1 560
2 CM070e11_r AV391289 334 880




Chlamydomonas reinhardtii
Kazusa DNA Research Institute