KCC001607A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001607A_C01 KCC001607A_c01
cgagccggatgtggtgcacgagctgattggccacgtgccgctgctggccgaccccgccta
cgcccggctgatccagaccaTTGGGCTGGCCTCGTTGGCCGCGGACGACAAACAGATCTG
GCACCTGACCAAGGTGTATTGGCACACGGTGGAGTTTGGGGTGGTGCGAGAGGGAGACCA
GGTCAAGGCCTTCGGCGCAGGCATCCTGTCCAGCTACGGCGAGCTGGCGCACATGGCCTC
GGGCGCAGCGGCCCTGGAGCGCCTGGACCCCTTCCGGCCGCAGCCGCGCATGGCGTACAA
GGACGGCTTCCAGAAGCGGTACTTCGTACTGGACAGCTTCGCAGAGGGCTCGGAGCTGTT
GAGCAGCTACGCGGCGAGCCTGGGGCTGCCTGAGTCGCTGCGTGGCGACGCCAGCGTGGC
GTGAGGGCGGGGTTTGCGCAGGTTAGGGAGGGAGGCAGGATGGGAGAGGCCCGGAGATGG
TTGGGTACCAGACCAAACTAAACCAAAACCAACGAAAACGGGAGTGCAGGCAGAGGCGTG
GGGGAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001607A_C01 KCC001607A_c01
         (546 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|O42091|TY3H_ANGAN Tyrosine 3-monooxygenase (Tyrosine 3-hydrox...   130  1e-29
emb|CAA17124.1| tyrosine 3-monooxygenase [Takifugu rubripes]          125  5e-28
dbj|BAC82588.1| tyrosine hydroxylase [Canis familiaris]               123  1e-27
gb|AAP82284.1| Pah [Danio rerio]                                      123  2e-27
gb|AAH56537.1| Unknown (protein for MGC:65981) [Danio rerio]          123  2e-27

>sp|O42091|TY3H_ANGAN Tyrosine 3-monooxygenase (Tyrosine 3-hydroxylase) (TH)
           gi|2597811|emb|CAA04264.1| tyrosine hydroxylase
           [Anguilla anguilla]
          Length = 488

 Score =  130 bits (327), Expect = 1e-29
 Identities = 66/136 (48%), Positives = 84/136 (61%)
 Frame = +2

Query: 2   EPDVVHELIGHVPLLADPAYARLIQTIGLASLAADDKQIWHLTKVYWHTVEFGVVREGDQ 181
           EPD VHEL+GHVP+LAD  +A+  Q IGLASL A ++ I  L+ +YW TVEFG+ ++GD 
Sbjct: 316 EPDCVHELLGHVPMLADRTFAQFSQNIGLASLGASEEDIEKLSTLYWFTVEFGLCKQGDG 375

Query: 182 VKAFGAGILSSYGELAHMASGAAALERLDPFRPQPRMAYKDGFQKRYFVLDSFAEGSELL 361
           VKA+GAG+LSSYGEL H  S        DP            +Q  YFV +SF +  E L
Sbjct: 376 VKAYGAGLLSSYGELVHSLSDEPERREFDPEAAAAEPYQDQNYQSVYFVSESFTDAKEKL 435

Query: 362 SSYAASLGLPESLRGD 409
             YAA +  P S+R D
Sbjct: 436 RVYAAGINRPFSVRFD 451

>emb|CAA17124.1| tyrosine 3-monooxygenase [Takifugu rubripes]
          Length = 489

 Score =  125 bits (313), Expect = 5e-28
 Identities = 61/136 (44%), Positives = 85/136 (61%)
 Frame = +2

Query: 2   EPDVVHELIGHVPLLADPAYARLIQTIGLASLAADDKQIWHLTKVYWHTVEFGVVREGDQ 181
           EPD VHEL+GHVP+LAD  +A+  Q++GLASL A D+ I  L+ +YW TVE+G+ ++  +
Sbjct: 317 EPDCVHELLGHVPMLADSTFAQFSQSLGLASLGASDEDIEKLSTLYWFTVEYGLCKQNGE 376

Query: 182 VKAFGAGILSSYGELAHMASGAAALERLDPFRPQPRMAYKDGFQKRYFVLDSFAEGSELL 361
           VKA+GAG+LSSYGEL H  S    +   DP     +      +Q  YF+ +SFA+  E  
Sbjct: 377 VKAYGAGLLSSYGELVHSLSDEPEVREFDPDAAAVQPYQDQTYQPVYFISESFADAKEKF 436

Query: 362 SSYAASLGLPESLRGD 409
             Y A +  P S+R D
Sbjct: 437 RRYVAGIKRPFSVRFD 452

>dbj|BAC82588.1| tyrosine hydroxylase [Canis familiaris]
          Length = 495

 Score =  123 bits (309), Expect = 1e-27
 Identities = 61/136 (44%), Positives = 87/136 (63%)
 Frame = +2

Query: 2   EPDVVHELIGHVPLLADPAYARLIQTIGLASLAADDKQIWHLTKVYWHTVEFGVVREGDQ 181
           EPD  HEL+GHVP+LAD  +A+  Q IGLASL A D++I  L+ +YW TVEFG+ ++  +
Sbjct: 323 EPDCCHELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGE 382

Query: 182 VKAFGAGILSSYGELAHMASGAAALERLDPFRPQPRMAYKDGFQKRYFVLDSFAEGSELL 361
           VKA+GAG+LSSYGEL H  S    +   DP     +      +Q  YFV +SF++  + L
Sbjct: 383 VKAYGAGLLSSYGELLHSLSEEPEIRAFDPDAAAVQPYQDQTYQSVYFVSESFSDAKDKL 442

Query: 362 SSYAASLGLPESLRGD 409
            +YA+ +  P S++ D
Sbjct: 443 RNYASRIQRPFSVKFD 458

>gb|AAP82284.1| Pah [Danio rerio]
          Length = 449

 Score =  123 bits (308), Expect = 2e-27
 Identities = 65/140 (46%), Positives = 90/140 (63%), Gaps = 3/140 (2%)
 Frame = +2

Query: 2   EPDVVHELIGHVPLLADPAYARLIQTIGLASLAADDKQIWHLTKVYWHTVEFGVVREGDQ 181
           EPD+ HEL+GHVPL ADP +A+  Q IGLASL A D+ I  L  VYW TVEFG+ ++G++
Sbjct: 278 EPDICHELLGHVPLFADPNFAQFSQEIGLASLGAPDEFIEKLATVYWFTVEFGLCKQGNE 337

Query: 182 VKAFGAGILSSYGELAHMASGAAALERLDPFRPQPRMAYK---DGFQKRYFVLDSFAEGS 352
           VKA+GAG+LSS+GEL +  +      +L PF P+     K     FQ  YFV +SF +  
Sbjct: 338 VKAYGAGLLSSFGELQYCLTNE---PKLQPFEPEKTCQQKYPITEFQPVYFVAESFEDAK 394

Query: 353 ELLSSYAASLGLPESLRGDA 412
           E +  +A ++  P S+R +A
Sbjct: 395 EKVRRFATTIPRPFSVRYNA 414

>gb|AAH56537.1| Unknown (protein for MGC:65981) [Danio rerio]
          Length = 449

 Score =  123 bits (308), Expect = 2e-27
 Identities = 65/140 (46%), Positives = 90/140 (63%), Gaps = 3/140 (2%)
 Frame = +2

Query: 2   EPDVVHELIGHVPLLADPAYARLIQTIGLASLAADDKQIWHLTKVYWHTVEFGVVREGDQ 181
           EPD+ HEL+GHVPL ADP +A+  Q IGLASL A D+ I  L  VYW TVEFG+ ++G++
Sbjct: 278 EPDICHELLGHVPLFADPNFAQFSQEIGLASLGAPDEFIEKLATVYWFTVEFGLCKQGNE 337

Query: 182 VKAFGAGILSSYGELAHMASGAAALERLDPFRPQPRMAYK---DGFQKRYFVLDSFAEGS 352
           VKA+GAG+LSS+GEL +  +      +L PF P+     K     FQ  YFV +SF +  
Sbjct: 338 VKAYGAGLLSSFGELQYCLTNE---PKLQPFEPEKTCQQKYPITEFQPVYFVAESFEDAK 394

Query: 353 ELLSSYAASLGLPESLRGDA 412
           E +  +A ++  P S+R +A
Sbjct: 395 EKVRRFATTIPRPFSVRYNA 414



EST assemble image


clone accession position
1 LC025e06_r AV620688 1 546
2 CM068h10_r AV391074 134 630




Chlamydomonas reinhardtii
Kazusa DNA Research Institute