Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001606A_C01 KCC001606A_c01
(576 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_457775.1| putative deoxyribonuclease [Salmonella enterica... 51 1e-05
ref|NP_504476.1| type V secretory pathway protein (31.7 kD) (5G7... 50 2e-05
ref|NP_462861.1| putative hydrolase of PHP superfamily [Salmonel... 50 2e-05
ref|NP_744460.1| hydrolase, TatD family [Pseudomonas putida KT24... 44 0.002
ref|NP_756647.1| Conserved hypothetical protein [Escherichia col... 44 0.002
>ref|NP_457775.1| putative deoxyribonuclease [Salmonella enterica subsp. enterica
serovar Typhi] gi|29143647|ref|NP_806989.1| putative
deoxyribonuclease [Salmonella enterica subsp. enterica
serovar Typhi Ty2] gi|25318587|pir||AF0915 probable
deoxyribonuclease tatD [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16504461|emb|CAD07916.1| putative deoxyribonuclease
[Salmonella enterica subsp. enterica serovar Typhi]
gi|29139282|gb|AAO70849.1| putative deoxyribonuclease
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
Length = 260
Score = 50.8 bits (120), Expect = 1e-05
Identities = 37/101 (36%), Positives = 50/101 (48%)
Frame = +2
Query: 269 DIGVNLMDHSFQSDLPKVLARAAAANVRAMLVDRHVCADQHCCRRARR*TRRWPPRPAAS 448
DIGVNL F D V+ARA AA V+ ML+ + H ++A + RR+P + +
Sbjct: 3 DIGVNLTSSQFAKDRDDVVARAFAAGVKGMLL---TGTNIHESQQALKLARRYPHCWSTA 59
Query: 449 LLHRRRASTQCQAMHYRHTGAAAPAGLPPQCVAIGECGLDF 571
+H +S A A P+ VAIGECGLDF
Sbjct: 60 GVHPHDSSQWSSASE----DAIIALANQPEVVAIGECGLDF 96
>ref|NP_504476.1| type V secretory pathway protein (31.7 kD) (5G75) [Caenorhabditis
elegans] gi|7498045|pir||T32529 hypothetical protein
CD4.2 - Caenorhabditis elegans gi|2662576|gb|AAB88340.1|
Cell-death-related nuclease protein 2 [Caenorhabditis
elegans] gi|31747253|gb|AAP57298.1| cell death-related
nuclease 2 [Caenorhabditis elegans]
Length = 286
Score = 50.4 bits (119), Expect = 2e-05
Identities = 27/66 (40%), Positives = 37/66 (55%)
Frame = +3
Query: 366 TGTCVRTSTAAAELVDEHAAGHPDQPLLYFTAGVHPHNAKQCTTDTLEQLRRLGSHPSVL 545
TGT + S A+LV+++ LYFTAGVHPH+AK TLE L++L +PS +
Sbjct: 40 TGTSEKISHECADLVEKYPG------FLYFTAGVHPHDAKDWNDGTLEALKKLQENPSCV 93
Query: 546 PSASAG 563
G
Sbjct: 94 AVGECG 99
Score = 40.8 bits (94), Expect = 0.014
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Frame = +2
Query: 263 IVDIGVNLMDHSFQSDLPKVLARAAAANVRAMLVD------RHVCADQHCCRRARR*TRR 424
+VDIG NL S+Q DL VL RA A + ++V H CAD +
Sbjct: 6 LVDIGANLGHPSYQKDLNDVLDRAKQAGLSKIMVTGTSEKISHECADL---------VEK 56
Query: 425 WPPRPAASLLHRRRASTQCQAMHYRHTGAAAPAGLP--PQCVAIGECGLDF 571
+P L+ A + A L P CVA+GECGLDF
Sbjct: 57 YP-----GFLYFTAGVHPHDAKDWNDGTLEALKKLQENPSCVAVGECGLDF 102
>ref|NP_462861.1| putative hydrolase of PHP superfamily [Salmonella typhimurium LT2]
gi|6960225|gb|AAF33415.1| 82% identity to E. coli
hypothetical protein (YIGW) (SW:P27859); contains
similarity to Pfam PF01026 family (Uncharacterized
protein family UPF0006), score=364.7, E=9.3e-106, N=1
[Salmonella typhimurium LT2] gi|16422541|gb|AAL22820.1|
putative hydrolase of PHP superfamily [Salmonella
typhimurium LT2]
Length = 260
Score = 50.4 bits (119), Expect = 2e-05
Identities = 37/101 (36%), Positives = 50/101 (48%)
Frame = +2
Query: 269 DIGVNLMDHSFQSDLPKVLARAAAANVRAMLVDRHVCADQHCCRRARR*TRRWPPRPAAS 448
DIGVNL F D V+ARA AA V+ ML+ + H ++A + RR+P + +
Sbjct: 3 DIGVNLTSSQFAKDRDDVVARAFAAGVKGMLL---TGTNIHESQQALKLARRYPHCWSTA 59
Query: 449 LLHRRRASTQCQAMHYRHTGAAAPAGLPPQCVAIGECGLDF 571
+H +S A A P+ VAIGECGLDF
Sbjct: 60 GVHPHDSSQWSPASE----DAIIALANQPEVVAIGECGLDF 96
>ref|NP_744460.1| hydrolase, TatD family [Pseudomonas putida KT2440]
gi|24983860|gb|AAN67924.1|AE016425_1 hydrolase, TatD
family [Pseudomonas putida KT2440]
Length = 265
Score = 43.9 bits (102), Expect = 0.002
Identities = 29/68 (42%), Positives = 34/68 (49%)
Frame = +3
Query: 360 LWTGTCVRTSTAAAELVDEHAAGHPDQPLLYFTAGVHPHNAKQCTTDTLEQLRRLGSHPS 539
L TGT + S A EL + A L+ TAGVHPH+AK TD+ QLR L S P
Sbjct: 35 LLTGTSLAVSEQALELCQQLDASGAH---LFATAGVHPHDAKAWDTDSERQLRLLLSEPR 91
Query: 540 VLPSASAG 563
V G
Sbjct: 92 VRAVGECG 99
Score = 32.0 bits (71), Expect = 6.3
Identities = 31/124 (25%), Positives = 42/124 (33%), Gaps = 21/124 (16%)
Frame = +2
Query: 263 IVDIGVNLMDHSFQSDLPKVLARAAAANVRAMLVDRHVCADQHCCRRARR*TRRWPPRPA 442
++DIGVNL + SF ++ RA A V ML+
Sbjct: 3 LIDIGVNLTNSSFHDQQAAIVERALEAGVTQMLL------------------------TG 38
Query: 443 ASLLHRRRASTQCQAMHYRHTGAAAPAGL---------------------PPQCVAIGEC 559
SL +A CQ + A AG+ P+ A+GEC
Sbjct: 39 TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAVGEC 98
Query: 560 GLDF 571
GLDF
Sbjct: 99 GLDF 102
>ref|NP_756647.1| Conserved hypothetical protein [Escherichia coli CFT073]
gi|26111038|gb|AAN83221.1|AE016770_21 Conserved
hypothetical protein [Escherichia coli CFT073]
Length = 264
Score = 43.9 bits (102), Expect = 0.002
Identities = 36/102 (35%), Positives = 50/102 (48%), Gaps = 1/102 (0%)
Frame = +2
Query: 269 DIGVNLMDHSFQSDLPKVLARAAAANVRAMLV-DRHVCADQHCCRRARR*TRRWPPRPAA 445
DIGVNL F D V+ARA A V +L+ ++ Q + AR+ + W +
Sbjct: 7 DIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQAQKLARQYSSCW----ST 62
Query: 446 SLLHRRRASTQCQAMHYRHTGAAAPAGLPPQCVAIGECGLDF 571
+ +H S+Q QA+ A P+ VAIGECGLDF
Sbjct: 63 AGVH-PHDSSQWQAVTEE---AIIELAAQPEVVAIGECGLDF 100
Score = 36.2 bits (82), Expect = 0.33
Identities = 22/68 (32%), Positives = 34/68 (49%)
Frame = +3
Query: 360 LWTGTCVRTSTAAAELVDEHAAGHPDQPLLYFTAGVHPHNAKQCTTDTLEQLRRLGSHPS 539
L TGT +R S A +L ++++ + TAGVHPH++ Q T E + L + P
Sbjct: 37 LITGTNLRESQQAQKLARQYSS-------CWSTAGVHPHDSSQWQAVTEEAIIELAAQPE 89
Query: 540 VLPSASAG 563
V+ G
Sbjct: 90 VVAIGECG 97
