KCC001601A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001601A_C01 KCC001601A_c01
agatgcccCGATAAACAGTGACCGATAATTTTTATAACTATACTTATAACTACTGTTTCT
AACCTCGAAAGGAGCGGGTTATCTTATAACACGCTGCCGCCACCGACCTCGTAAACTAAT
ACCCCTTTTTACCACACATTTTCATGGCTCAAGCGGGAATAAGCCATGCATGGTTGTCCA
CGACTGCAGCCATTGTATGCTGGTATTGTAGCAACATAGGCGTGCTCCTGCTAAATAAGT
ATTTGCTGTCAAGTACAGGATTTCATAACCCAGCTTTCTTAACGCTAGCACACATGTTGG
CTTGCGCGGCAATCGGATCAATTCTTGCTGGCCTTAAATGGACTCCGTCGAAGCTGATTC
GGAGTAGGCAGCAGTTCCTTACGGTTGTTCTCCTTTCGGCTGTCTTTTGCATGACTGTGG
TCCTCGGCAACGTTTCCTTGGCCTTCATCCCAGTTTCTTTTACCCAAACCATAGGCTCGA
CAACACCGTTCTTCACAGCCATCCTGGCCTTCGTTATGCAGGGCCAGCGTGAAGCACCTT
TCACATACGCTGCTCTCATTCCGATTATGTTGGGCGTCATTGTTGCTAGCGGCGGTGAGC
CGGCCTTCCATGTTATTGGTTTCACGTGTTGCGTCGCTGCCACCGCCCTCCGGGCCCTGA
AGTCCGTGGTGCAGTCCATACTCATGACCGACCCCGCCGAGAAATTGGATCCCATGAGCC
TGCTGCTCTACATGAGCTGCACCAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001601A_C01 KCC001601A_c01
         (745 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB09676.1| phosphate/phosphoenolpyruvate translocator prote...   219  3e-56
ref|NP_196201.2| phosphate translocator-related [Arabidopsis tha...   219  3e-56
gb|AAO16996.1| Putative phosphate/phosphoenolpyruvate translocat...   212  4e-54
ref|NP_187640.1| phosphate translocator-related [Arabidopsis tha...   211  7e-54
gb|AAL32553.1| phosphate/phosphoenolpyruvate translocator-like p...   211  1e-53

>dbj|BAB09676.1| phosphate/phosphoenolpyruvate translocator protein-like
           [Arabidopsis thaliana]
          Length = 307

 Score =  219 bits (559), Expect = 3e-56
 Identities = 106/187 (56%), Positives = 139/187 (73%), Gaps = 1/187 (0%)
 Frame = +3

Query: 180 TTAAIVCWYCSNIGVLLLNKYLLSSTGFHNPAFLTLAHMLACAAIGSI-LAGLKWTPSKL 356
           T   +  WY SNIGVLLLNKYLLS+ GF  P FLT+ HM AC+ +  + +A LK  P + 
Sbjct: 9   TIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWLKMVPMQT 68

Query: 357 IRSRQQFLTVVLLSAVFCMTVVLGNVSLAFIPVSFTQTIGSTTPFFTAILAFVMQGQREA 536
           IRSR QF  +  LS VFC++VV GN+SL F+PVSF Q IG+TTPFFTA+ A++M  ++EA
Sbjct: 69  IRSRVQFFKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLMTRKKEA 128

Query: 537 PFTYAALIPIMLGVIVASGGEPAFHVIGFTCCVAATALRALKSVVQSILMTDPAEKLDPM 716
             TY  L+P++ GV++ASGGEP+FH+ GF  C+AATA RALKSV+Q IL++   EKL+ M
Sbjct: 129 WLTYFTLVPVVTGVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSM 188

Query: 717 SLLLYMS 737
           +LLLYM+
Sbjct: 189 NLLLYMA 195

>ref|NP_196201.2| phosphate translocator-related [Arabidopsis thaliana]
          Length = 309

 Score =  219 bits (559), Expect = 3e-56
 Identities = 106/187 (56%), Positives = 139/187 (73%), Gaps = 1/187 (0%)
 Frame = +3

Query: 180 TTAAIVCWYCSNIGVLLLNKYLLSSTGFHNPAFLTLAHMLACAAIGSI-LAGLKWTPSKL 356
           T   +  WY SNIGVLLLNKYLLS+ GF  P FLT+ HM AC+ +  + +A LK  P + 
Sbjct: 11  TIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWLKMVPMQT 70

Query: 357 IRSRQQFLTVVLLSAVFCMTVVLGNVSLAFIPVSFTQTIGSTTPFFTAILAFVMQGQREA 536
           IRSR QF  +  LS VFC++VV GN+SL F+PVSF Q IG+TTPFFTA+ A++M  ++EA
Sbjct: 71  IRSRVQFFKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLMTRKKEA 130

Query: 537 PFTYAALIPIMLGVIVASGGEPAFHVIGFTCCVAATALRALKSVVQSILMTDPAEKLDPM 716
             TY  L+P++ GV++ASGGEP+FH+ GF  C+AATA RALKSV+Q IL++   EKL+ M
Sbjct: 131 WLTYFTLVPVVTGVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSM 190

Query: 717 SLLLYMS 737
           +LLLYM+
Sbjct: 191 NLLLYMA 197

>gb|AAO16996.1| Putative phosphate/phosphoenolpyruvate translocator protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 322

 Score =  212 bits (540), Expect = 4e-54
 Identities = 103/195 (52%), Positives = 140/195 (70%), Gaps = 1/195 (0%)
 Frame = +3

Query: 156 GISHAWLSTTAAIVCWYCSNIGVLLLNKYLLSSTGFHNPAFLTLAHMLACAAIG-SILAG 332
           G+ +    T   +  WY SNIGVLLLNKYLLS+ GF  P FLT+ HM ACA +  + +A 
Sbjct: 16  GLPNGRFFTVGLVTAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMSACALLSYAAIAW 75

Query: 333 LKWTPSKLIRSRQQFLTVVLLSAVFCMTVVLGNVSLAFIPVSFTQTIGSTTPFFTAILAF 512
           L+  P +L+RSR Q   +  LS VFC +VV GNVSL ++PVSF Q +G+TTPFFTA+ A+
Sbjct: 76  LRVVPMQLVRSRVQLAKIAALSLVFCGSVVSGNVSLRYLPVSFNQAVGATTPFFTAVFAY 135

Query: 513 VMQGQREAPFTYAALIPIMLGVIVASGGEPAFHVIGFTCCVAATALRALKSVVQSILMTD 692
           +M  +RE+  TY  L+P++ GV++ASGGEP+FH+ GF  C+ ATA RALK+V+Q IL++ 
Sbjct: 136 IMTVKRESWVTYLTLVPVVTGVMIASGGEPSFHLFGFIMCIGATAARALKTVLQGILLSS 195

Query: 693 PAEKLDPMSLLLYMS 737
             EKL+ M+LLLYM+
Sbjct: 196 EGEKLNSMNLLLYMA 210

>ref|NP_187640.1| phosphate translocator-related [Arabidopsis thaliana]
           gi|6056196|gb|AAF02813.1|AC009400_9 unknown protein
           [Arabidopsis thaliana]
          Length = 355

 Score =  211 bits (538), Expect = 7e-54
 Identities = 103/189 (54%), Positives = 139/189 (73%), Gaps = 1/189 (0%)
 Frame = +3

Query: 174 LSTTAAIVCWYCSNIGVLLLNKYLLSSTGFHNPAFLTLAHMLACAAIGSI-LAGLKWTPS 350
           L  ++ I+ WY SNIGVLLLNK+LLS+ GF  P FLT+ HM ACA +  + +  LK  P 
Sbjct: 56  LFISSLIILWYTSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYVSIVFLKLVPL 115

Query: 351 KLIRSRQQFLTVVLLSAVFCMTVVLGNVSLAFIPVSFTQTIGSTTPFFTAILAFVMQGQR 530
           + ++SR QFL V  LS VFC +VV GN+SL ++PVSF Q +G+TTPFFTA+ A++M  +R
Sbjct: 116 QYLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYIMTFKR 175

Query: 531 EAPFTYAALIPIMLGVIVASGGEPAFHVIGFTCCVAATALRALKSVVQSILMTDPAEKLD 710
           EA  TY AL+P++ GV++ASGGEP FH  GF  C++ATA RA KSV+Q IL++   E+L+
Sbjct: 176 EAWVTYGALVPVVTGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGERLN 235

Query: 711 PMSLLLYMS 737
            M+L+LYMS
Sbjct: 236 SMNLMLYMS 244

>gb|AAL32553.1| phosphate/phosphoenolpyruvate translocator-like protein
           [Arabidopsis thaliana] gi|20259810|gb|AAM13252.1|
           phosphate/phosphoenolpyruvate translocator-like protein
           [Arabidopsis thaliana]
          Length = 309

 Score =  211 bits (537), Expect = 1e-53
 Identities = 105/189 (55%), Positives = 138/189 (72%), Gaps = 1/189 (0%)
 Frame = +3

Query: 174 LSTTAAIVCWYCSNIGVLLLNKYLLSSTGFHNPAFLTLAHMLACAAIGSI-LAGLKWTPS 350
           L  +  I+ WY SNIGVLLLNK+LLS+ GF  P FLT+ HM ACA +  I +  LK  P 
Sbjct: 10  LFISTLIISWYSSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYISIVFLKLVPL 69

Query: 351 KLIRSRQQFLTVVLLSAVFCMTVVLGNVSLAFIPVSFTQTIGSTTPFFTAILAFVMQGQR 530
           + ++SR QFL V  LS VFC +VV GN+SL ++PVSF Q +G+TTPFFTA+ A++M  +R
Sbjct: 70  QHLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKR 129

Query: 531 EAPFTYAALIPIMLGVIVASGGEPAFHVIGFTCCVAATALRALKSVVQSILMTDPAEKLD 710
           EA  TY AL+P++ GV++ASGGEP FH  GF  C++ATA RA KSV+Q IL++   EKL+
Sbjct: 130 EAWVTYGALVPVVAGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGEKLN 189

Query: 711 PMSLLLYMS 737
            M+L+LYMS
Sbjct: 190 SMNLMLYMS 198



EST assemble image


clone accession position
1 LC069b05_r AV623823 1 503
2 CM068c06_r AV391092 6 578
3 HC001f06_r AV631914 156 639
4 LCL002b11_r AV626086 409 745




Chlamydomonas reinhardtii
Kazusa DNA Research Institute