Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001596A_C01 KCC001596A_c01
(612 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA40618.1| GLP_23_24616_25470 [Giardia lamblia ATCC 50803] 47 2e-04
gb|AAB58410.1| merozoite surface protein-1 [Plasmodium berghei] 39 0.045
gb|EAA41872.1| GLP_158_56774_55563 [Giardia lamblia ATCC 50803] 39 0.045
pir||W2WL5 E2 protein - human papillomavirus type 5 38 0.10
ref|XP_342579.1| similar to zinc finger protein 335; zinc-finger... 38 0.13
>gb|EAA40618.1| GLP_23_24616_25470 [Giardia lamblia ATCC 50803]
Length = 284
Score = 47.0 bits (110), Expect = 2e-04
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +2
Query: 383 GHIYEVPGALHKQPEASKQTSPSFSLPRAPRLKETPSTTPGPGNYDAGLSSVEPRQPLSP 562
G + PGA + +P++S PSFSL +++ + +PGPG Y+ L + P +
Sbjct: 186 GPVTPGPGAYNPRPQSS---GPSFSLSGRSPVRKPRTESPGPGAYNPQLKNTGPSFSMGG 242
Query: 563 NRSPQRVISAAAPGAG 610
RSP R+ A PG G
Sbjct: 243 TRSPVRIPQADIPGPG 258
Score = 33.1 bits (74), Expect = 3.2
Identities = 27/74 (36%), Positives = 32/74 (42%), Gaps = 2/74 (2%)
Frame = +2
Query: 395 EVPGALHKQPEASKQTS--PSFSLPRAPRLKETPSTTPGPGNYDAGLSSVEPRQPLSPNR 568
EVPG S TS PS+S + + TPGPG Y+ S P LS R
Sbjct: 153 EVPGPGMYDVNISYVTSSSPSYSFGIRSKTPKQGPVTPGPGAYNPRPQSSGPSFSLS-GR 211
Query: 569 SPQRVISAAAPGAG 610
SP R +PG G
Sbjct: 212 SPVRKPRTESPGPG 225
>gb|AAB58410.1| merozoite surface protein-1 [Plasmodium berghei]
Length = 153
Score = 39.3 bits (90), Expect = 0.045
Identities = 21/68 (30%), Positives = 29/68 (41%)
Frame = +2
Query: 404 GALHKQPEASKQTSPSFSLPRAPRLKETPSTTPGPGNYDAGLSSVEPRQPLSPNRSPQRV 583
G + +P AS T P+ P P TP T P P + V P P +P+
Sbjct: 5 GVIDPEPVASPPTPPTPPTPPTPPTPPTPPTLPTPPTLPTTPTPVTPAAPSEQTTTPEAA 64
Query: 584 ISAAAPGA 607
+A+ PGA
Sbjct: 65 TAASNPGA 72
>gb|EAA41872.1| GLP_158_56774_55563 [Giardia lamblia ATCC 50803]
Length = 403
Score = 39.3 bits (90), Expect = 0.045
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +2
Query: 392 YEVPGALHKQPEASKQTSPSFSLPRAPRLKETPSTTPGPGNYDAGLSSVEPRQP 553
Y PGA + A K P+FSL R+ E+ + PGPG Y+ +S ++P P
Sbjct: 207 YPGPGAYEQDVRAVKPALPAFSL-RSRHGPESTNINPGPGTYEQDVSQIKPAAP 259
Score = 33.1 bits (74), Expect = 3.2
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +2
Query: 401 PGALHKQPEASKQTSPSFSLPRAPRLKETPSTTPGPGNYDAGLSSVEPRQPLSPNRSPQR 580
PGA ++ +K ++PS+SL P T PGPG Y P L S
Sbjct: 145 PGAYNQDIRPTKASAPSYSLSGRPE-NAAIDTIPGPGAYSIATHLSGPASTLKGRTSTHT 203
Query: 581 VISAAAPGA 607
+ PGA
Sbjct: 204 PDNYPGPGA 212
Score = 32.3 bits (72), Expect = 5.5
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Frame = +2
Query: 365 KCREGPG--HIYEVPGALHKQPEASKQTSPSFSLPRAPRLKETPSTTPGPGNYD-AGLSS 535
+ R GP +I PG + K +P++SL + +T PGPG Y+ SS
Sbjct: 230 RSRHGPESTNINPGPGTYEQDVSQIKPAAPAYSLS-GKNVNLLKNTNPGPGTYEHTKFSS 288
Query: 536 VEPRQP---LSPNRSPQRVISAAAPGA 607
V+ R P LS RV PGA
Sbjct: 289 VKERGPAYSLSGRTLIGRVTVTPGPGA 315
Score = 31.6 bits (70), Expect = 9.4
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 1/126 (0%)
Frame = +2
Query: 236 GRSMFGKQADSRKGNAPILSMGAKTPVADGKQFLSRKHVEVERKCREGPGHIYEVPGALH 415
G + + + K +P S+ ++T + G E PG PGA
Sbjct: 76 GPAAYSQNVRPIKPQSPSFSLRSRTTIRGGN---------------ENPG-----PGAYE 115
Query: 416 KQPEASKQTSPSFSLPRAPRLKETPSTTPGPGNYDAGLSSVEPRQP-LSPNRSPQRVISA 592
+ + K+ +P+ SL R+ + +T PGPG Y+ + + P S + P+
Sbjct: 116 QNVDPIKERAPASSL-RSRVGADIINTNPGPGAYNQDIRPTKASAPSYSLSGRPENAAID 174
Query: 593 AAPGAG 610
PG G
Sbjct: 175 TIPGPG 180
>pir||W2WL5 E2 protein - human papillomavirus type 5
Length = 514
Score = 38.1 bits (87), Expect = 0.10
Identities = 34/114 (29%), Positives = 46/114 (39%), Gaps = 16/114 (14%)
Frame = +3
Query: 309 PLSPTENSSSQESTSRLNASAGRALATSMR---YPERFTSNQR----QANRHRHRFRCPG 467
P +PT ++++ +STSR ++ + T R Y R +S R Q R R R R P
Sbjct: 217 PATPTTSTTAVDSTSRQLTTSKQPQQTETRGRRYGRRPSSKSRRSQTQQRRSRSRHRSPS 276
Query: 468 RPG*RKHPPRHLDRETM---------TRASPPSNPASRCLPTAARSGSFRQQHR 602
R R H R T TRA +P+ PT R G R R
Sbjct: 277 RSRSRSKSQTHTTRSTTRSRSTSLTKTRALTSRSPSRGRSPTTCRRGGGRSPRR 330
>ref|XP_342579.1| similar to zinc finger protein 335; zinc-finger/leucine-zipper
co-transducer NIF1; NRC-interacting factor 1 [Rattus
norvegicus]
Length = 1298
Score = 37.7 bits (86), Expect = 0.13
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +2
Query: 299 GAKTPVADGKQFLSR--KHVEVERKCREGPGHIYEVPGALHKQPEASKQTSPSFSLPRAP 472
GAK + F +R K++ + +CR + +E G H + S++ P FSL +
Sbjct: 636 GAKPFACEYCHFSTRHKKNLRLHVRCRHA--NSFEEWGRRHPEEPPSRRR-PFFSLQQIE 692
Query: 473 RLKETPSTTPGPGNYDAGLSSVEPRQPLSPNRSPQRVISAAAPGA 607
LK+ S PGP AG + + P P +P + A GA
Sbjct: 693 ELKQQHSAAPGPPLSSAGPEAPQEPAPFQPPETPPLLCPDALGGA 737
