KCC001592A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001592A_C01 KCC001592A_c01
aAAGCTTCGCCCCTTCGCACTACAAGGTGAACTCCCCACCCACCCCCTAAAGTTGCCTTC
CTAGCCAGTACTGAAACTTTGAGCAATGAAGGAGGTCTTCATTGCTCTTGGAGGCGCCCT
TTTGGGTGGCCTCCTTGCTGGCAAGCTCGGCAAAAAGAAGAATTCTGATGCCTCTGCCGC
GAAGAAGGATGCTGCTTCGGCTCCCAAGGGCTACACTTACCAGTGGCCGCGGCCGGCGAT
GACCGTGGACGCAATTATTGTGTCGCAGCCGACGCCTGCCAGCCCCGCACAGCTACTGCT
CATCCGCCGCAAGTTTGACCCCTTCAAGGACTCGTGGGCGCTGCCAGGTGGCTTTGTTGA
CGCCGGTGAGGGCCTGGACGTGGCGGCCGCTCGTGAGCTGCAGGAGGAGACGTCGGTGGA
CCCCGCGTCCGTGTCCATGACCCAGGTTGGCGCCTTTGCTGACCCTGGCCGCGACCCCCG
CGGCTGGACCGTGACGGTGGCTTACGCTGCGCTGGTGCCCTCGACCGAGCTGGGAGTAAA
GGCGGCGGACGACGCCAAGGACGCGCGCTGGTTCGACGTGTCGGCGCTGCCGCAGGTGGT
CTTCGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001592A_C01 KCC001592A_c01
         (606 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC76070.1| Nudix hydrolase [Synechococcus sp. PCC 7002]          107  1e-22
ref|NP_816334.1| MutT/nudix family protein [Enterococcus faecali...   104  1e-21
ref|ZP_00059712.1| COG1051: ADP-ribose pyrophosphatase [Clostrid...   102  4e-21
ref|ZP_00036833.1| COG1051: ADP-ribose pyrophosphatase [Enteroco...   101  9e-21
ref|NP_248141.1| mutator MutT protein, putative (mutT) [Methanoc...    96  5e-19

>dbj|BAC76070.1| Nudix hydrolase [Synechococcus sp. PCC 7002]
          Length = 230

 Score =  107 bits (267), Expect = 1e-22
 Identities = 55/131 (41%), Positives = 79/131 (59%)
 Frame = +2

Query: 212 YTYQWPRPAMTVDAIIVSQPTPASPAQLLLIRRKFDPFKDSWALPGGFVDAGEGLDVAAA 391
           YTY++P+P++TVD ++       +  +++LI+R  +PFK  WALPGGFV   E L+ AA 
Sbjct: 3   YTYEYPKPSVTVDCVVFGLDATHT-LKMMLIQRGVEPFKGEWALPGGFVRLDESLEEAAM 61

Query: 392 RELQEETSVDPASVSMTQVGAFADPGRDPRGWTVTVAYAALVPSTELGVKAADDAKDARW 571
           REL+EET V+   + + Q+  F  P RDPR   +TVAY AL+   +  + A  DA    W
Sbjct: 62  RELREETGVE--KIFLEQLYTFGAPDRDPRDRVITVAYYALINLEDHPIHAQTDADAVAW 119

Query: 572 FDVSALPQVVF 604
           F +  LP V F
Sbjct: 120 FSLDELPNVAF 130

>ref|NP_816334.1| MutT/nudix family protein [Enterococcus faecalis V583]
           gi|29344646|gb|AAO82404.1| MutT/nudix family protein
           [Enterococcus faecalis V583]
          Length = 273

 Score =  104 bits (259), Expect = 1e-21
 Identities = 50/120 (41%), Positives = 78/120 (64%)
 Frame = +2

Query: 221 QWPRPAMTVDAIIVSQPTPASPAQLLLIRRKFDPFKDSWALPGGFVDAGEGLDVAAAREL 400
           ++ +P++TVD +++     A   ++LLI+RK  PF++SWALPGGFV+  E  + +  RE 
Sbjct: 34  EYEKPSLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRET 93

Query: 401 QEETSVDPASVSMTQVGAFADPGRDPRGWTVTVAYAALVPSTELGVKAADDAKDARWFDV 580
           +EET V  +  ++ Q+ +F+ P RDPRGW VTV+Y A +    L   A DDAK+  WF++
Sbjct: 94  KEETGVVISQENIEQLHSFSRPDRDPRGWVVTVSYLAFIGEEPL--IAGDDAKEVHWFNL 151

>ref|ZP_00059712.1| COG1051: ADP-ribose pyrophosphatase [Clostridium thermocellum ATCC
           27405]
          Length = 317

 Score =  102 bits (254), Expect = 4e-21
 Identities = 54/130 (41%), Positives = 81/130 (61%), Gaps = 9/130 (6%)
 Frame = +2

Query: 221 QWPRPAMTVDAIIVS---------QPTPASPAQLLLIRRKFDPFKDSWALPGGFVDAGEG 373
           ++ RP++TVD +I +         +  P    +LL+I+R   P+   WALPGGF+   E 
Sbjct: 39  KYERPSVTVDMLIFTVTNEKKENYRKLPEKVLRLLMIKRADHPYIGQWALPGGFIKMDES 98

Query: 374 LDVAAARELQEETSVDPASVSMTQVGAFADPGRDPRGWTVTVAYAALVPSTELGVKAADD 553
           L+  A REL+EET++D  ++ M Q+  + D  RDPR   ++V+Y ALV S+ L +KA+DD
Sbjct: 99  LEEGALRELKEETNID--NIYMEQLYTWGDVNRDPRTRIISVSYMALVDSSNLNIKASDD 156

Query: 554 AKDARWFDVS 583
           A DA+WF VS
Sbjct: 157 ADDAKWFTVS 166

>ref|ZP_00036833.1| COG1051: ADP-ribose pyrophosphatase [Enterococcus faecium]
          Length = 273

 Score =  101 bits (251), Expect = 9e-21
 Identities = 49/118 (41%), Positives = 73/118 (61%)
 Frame = +2

Query: 221 QWPRPAMTVDAIIVSQPTPASPAQLLLIRRKFDPFKDSWALPGGFVDAGEGLDVAAAREL 400
           ++ +P++TVD +++         ++LLI+RK  P+++SWALPGGFV   E    +  RE 
Sbjct: 34  EYDKPSLTVDIVLMCYNKEEDQLKVLLIQRKGHPYRNSWALPGGFVQKDESTGESVLRET 93

Query: 401 QEETSVDPASVSMTQVGAFADPGRDPRGWTVTVAYAALVPSTELGVKAADDAKDARWF 574
           +EET V  +  ++ Q+  F+ P RDPRGW VTV+Y A +    L   A DDAK+ RWF
Sbjct: 94  KEETGVVISKENIEQLHTFSTPNRDPRGWVVTVSYLAFIGEEPL--IAGDDAKEVRWF 149

>ref|NP_248141.1| mutator MutT protein, putative (mutT) [Methanococcus jannaschii]
           gi|10719867|sp|Q58549|ADPP_METJA ADP-ribose
           pyrophosphatase (ADP-ribose diphosphatase) (Adenosine
           diphosphoribose pyrophosphatase) (ADPR-PPase)
           (ADP-ribose phosphohydrolase) gi|2129134|pir||D64443
           mutator protein mutT - Methanococcus jannaschii
           gi|1500003|gb|AAB99149.1| mutator MutT protein, putative
           (mutT) [Methanococcus jannaschii]
          Length = 169

 Score = 95.5 bits (236), Expect = 5e-19
 Identities = 53/124 (42%), Positives = 79/124 (62%)
 Frame = +2

Query: 233 PAMTVDAIIVSQPTPASPAQLLLIRRKFDPFKDSWALPGGFVDAGEGLDVAAARELQEET 412
           PA+ VD II          ++LLI+RK +PFK  +ALPGGFV+ GE ++ A  RE++EET
Sbjct: 41  PAVAVDGIIEKDN------KILLIKRKNNPFKGCFALPGGFVECGETVEEAVVREIKEET 94

Query: 413 SVDPASVSMTQVGAFADPGRDPRGWTVTVAYAALVPSTELGVKAADDAKDARWFDVSALP 592
            + P   S+  +G ++ P RDPRG  +++ +   V   EL  KA DDAK+A +FD++ LP
Sbjct: 95  GLIPKVKSL--LGVYSSPDRDPRGHVISIVFILDVIGGEL--KAGDDAKEAEFFDLNNLP 150

Query: 593 QVVF 604
           ++ F
Sbjct: 151 KLAF 154



EST assemble image


clone accession position
1 MX239c01_r BP091465 1 244
2 LC059e10_r AV623146 2 517
3 CM066g05_r AV390872 43 606




Chlamydomonas reinhardtii
Kazusa DNA Research Institute