KCC001586A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001586A_C01 KCC001586A_c01
gcacgagagtttacagaataCTTAGTACTGTTAACTTCTTTGCGACCAAAGTTCGCGGCT
GTTGTGTTTGGCGAAAATGGGAGAGGCTCAAGGAAGCAAGCAGCAAGGGCTTGGAATGCA
GCTCTTGGTAACATATTCGTACATGTTCATATGGATCTTTCTATCGGCTGCCGTGATCAA
TGGTCAACAAGTATGTGCTGTCGATGAGCGGCTTTCCTTACCCGGTTGCCCTTACCTGCA
CGCACATGGGCTTCTGCTCTATACTAGCATTCGTGCTGGTGAAGGGAGGGTTCGTAGAAG
CAGTCAACATCACCGCTGACACTTACCTGAGCTGTATCCTGCCCATCGGCCTGCTGTTCG
CGGGCACTCTGTGGCTGGGCAACGCCGCCTACCTATACCTGTCCGTGTCCTTCATCCAGA
TGCTCAAGGCGTCCATGCCCATGGTCGTGTTCGTTGTGGGCGTGGGCTTCGCGACGGAGA
AGTTCACCACGCGGGTGGCCCTCAACATGGTGGTGGTGGGCACCGGAATCGCCATTGCGT
CATATGGCGAGAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001586A_C01 KCC001586A_c01
         (553 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_568469.1| phosphate translocator-related [Arabidopsis tha...   133  6e-34
ref|NP_196684.1| phosphate translocator-related [Arabidopsis tha...   132  9e-33
ref|NP_194965.1| phosphate translocator-related [Arabidopsis tha...   125  5e-31
ref|NP_180122.1| phosphate translocator-related [Arabidopsis tha...   126  1e-30
dbj|BAB86434.1| P0003D09.29 [Oryza sativa (japonica cultivar-gro...   117  3e-28

>ref|NP_568469.1| phosphate translocator-related [Arabidopsis thaliana]
          Length = 349

 Score =  133 bits (334), Expect(2) = 6e-34
 Identities = 66/125 (52%), Positives = 92/125 (72%), Gaps = 3/125 (2%)
 Frame = +3

Query: 186 NKYVLS--MSGFPYPVALTCTHMGFCSILAFVLVKG-GFVEAVNITADTYLSCILPIGLL 356
           NKY+L   M  +P+P++LT  HM FCS LAF+L+K   FVE V+++ DTYL  ++PIG L
Sbjct: 36  NKYILDKKMYDWPFPISLTMIHMSFCSTLAFLLIKVFKFVEPVSMSRDTYLRSVVPIGAL 95

Query: 357 FAGTLWLGNAAYLYLSVSFIQMLKASMPMVVFVVGVGFATEKFTTRVALNMVVVGTGIAI 536
           ++ +LWL N+AY+YLSVSFIQMLKA MP+ V+ +GV F  E F +   +NM+ +  G+AI
Sbjct: 96  YSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSETMMNMLSISFGVAI 155

Query: 537 ASYGE 551
           A+YGE
Sbjct: 156 AAYGE 160

 Score = 32.7 bits (73), Expect(2) = 6e-34
 Identities = 13/29 (44%), Positives = 21/29 (71%)
 Frame = +2

Query: 92  GSKQQGLGMQLLVTYSYMFIWIFLSAAVI 178
           GS  +G+   ++++Y+Y+ IWIFLS  VI
Sbjct: 5   GSLSEGVIKNIIISYTYVAIWIFLSFTVI 33

>ref|NP_196684.1| phosphate translocator-related [Arabidopsis thaliana]
           gi|8953385|emb|CAB96658.1| putative protein [Arabidopsis
           thaliana]
          Length = 351

 Score =  132 bits (333), Expect(2) = 9e-33
 Identities = 66/125 (52%), Positives = 91/125 (72%), Gaps = 3/125 (2%)
 Frame = +3

Query: 186 NKYVLS--MSGFPYPVALTCTHMGFCSILAFVLVKG-GFVEAVNITADTYLSCILPIGLL 356
           NKY+L   M  +P+P++LT  HM FCS LAF+++K   FVE V +T +TYL  ++PIG L
Sbjct: 36  NKYILDKKMYNWPFPISLTMIHMSFCSTLAFLIIKVFKFVEPVKMTRETYLRSVVPIGAL 95

Query: 357 FAGTLWLGNAAYLYLSVSFIQMLKASMPMVVFVVGVGFATEKFTTRVALNMVVVGTGIAI 536
           +A +LWL N+AY+YLSVSFIQMLKA MP+ V+ +GV F  E F +   +NM+ +  G+AI
Sbjct: 96  YALSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSDTMMNMLSISFGVAI 155

Query: 537 ASYGE 551
           A+YGE
Sbjct: 156 AAYGE 160

 Score = 29.3 bits (64), Expect(2) = 9e-33
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +2

Query: 92  GSKQQGLGMQLLVTYSYMFIWIFLSAAVI 178
           G+  + +   ++++YSY+ IWIFLS  VI
Sbjct: 5   GALSESVIKNIVLSYSYVAIWIFLSFTVI 33

>ref|NP_194965.1| phosphate translocator-related [Arabidopsis thaliana]
           gi|7486641|pir||T05349 hypothetical protein F8B4.90 -
           Arabidopsis thaliana gi|4049341|emb|CAA22566.1| putative
           protein [Arabidopsis thaliana]
           gi|7270143|emb|CAB79956.1| putative protein [Arabidopsis
           thaliana]
          Length = 350

 Score =  125 bits (313), Expect(2) = 5e-31
 Identities = 62/125 (49%), Positives = 87/125 (69%), Gaps = 3/125 (2%)
 Frame = +3

Query: 186 NKYVLS--MSGFPYPVALTCTHMGFCSILAFVLVKG-GFVEAVNITADTYLSCILPIGLL 356
           NKY+L   M  +P+P+ LT  HM FCS LA +L+K    VE V+++ DTY+  ++PIG L
Sbjct: 36  NKYILDKKMYNWPFPITLTMIHMAFCSSLAVILIKVFKIVEPVSMSRDTYIRSVVPIGAL 95

Query: 357 FAGTLWLGNAAYLYLSVSFIQMLKASMPMVVFVVGVGFATEKFTTRVALNMVVVGTGIAI 536
           ++ +LWL N+AY+YLSVSFIQMLKA MP+ V+ +GV    E F +    NM+ +  G+AI
Sbjct: 96  YSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLKKESFKSETMTNMLSISFGVAI 155

Query: 537 ASYGE 551
           A+YGE
Sbjct: 156 AAYGE 160

 Score = 31.2 bits (69), Expect(2) = 5e-31
 Identities = 13/29 (44%), Positives = 21/29 (71%)
 Frame = +2

Query: 92  GSKQQGLGMQLLVTYSYMFIWIFLSAAVI 178
           G+   G+  ++L++Y+Y+ IWIFLS  VI
Sbjct: 5   GALSDGVIKKILLSYTYVAIWIFLSFTVI 33

>ref|NP_180122.1| phosphate translocator-related [Arabidopsis thaliana]
           gi|25412327|pir||D84649 hypothetical protein At2g25520
           [imported] - Arabidopsis thaliana
           gi|4432863|gb|AAD20711.1| putative
           phosphate/phosphoenolpyruvate translocator protein
           [Arabidopsis thaliana] gi|15809998|gb|AAL06926.1|
           At2g25520/F13B15.18 [Arabidopsis thaliana]
           gi|15810281|gb|AAL07028.1| putative
           phosphate/phosphoenolpyruvate translocator protein
           [Arabidopsis thaliana] gi|27363284|gb|AAO11561.1|
           At2g25520/F13B15.18 [Arabidopsis thaliana]
          Length = 347

 Score =  126 bits (316), Expect(2) = 1e-30
 Identities = 63/125 (50%), Positives = 89/125 (70%), Gaps = 3/125 (2%)
 Frame = +3

Query: 186 NKYVLS--MSGFPYPVALTCTHMGFCSILAFVLVKG-GFVEAVNITADTYLSCILPIGLL 356
           NKY+L   M  +P+P+ LT  HMGFCS LA +L+K    VE V+++ +TYL  ++PIG L
Sbjct: 36  NKYILDKKMYNWPFPITLTMIHMGFCSSLAVILIKVFKVVEPVSMSRETYLRSVVPIGAL 95

Query: 357 FAGTLWLGNAAYLYLSVSFIQMLKASMPMVVFVVGVGFATEKFTTRVALNMVVVGTGIAI 536
           ++ +LWL N+AY+YLSVSFIQMLKA MP+ V+ +GV    E F ++   NM+ +  G+AI
Sbjct: 96  YSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLKKETFKSQTMTNMLSISFGVAI 155

Query: 537 ASYGE 551
           A+YGE
Sbjct: 156 AAYGE 160

 Score = 28.5 bits (62), Expect(2) = 1e-30
 Identities = 11/24 (45%), Positives = 19/24 (78%)
 Frame = +2

Query: 107 GLGMQLLVTYSYMFIWIFLSAAVI 178
           G+  +++++Y+Y+ IWIFLS  VI
Sbjct: 10  GVIKKIILSYTYVAIWIFLSFTVI 33

>dbj|BAB86434.1| P0003D09.29 [Oryza sativa (japonica cultivar-group)]
           gi|20804546|dbj|BAB92238.1| similar to
           phosphate/phosphoenolpyruvate translocator protein
           [Oryza sativa (japonica cultivar-group)]
          Length = 361

 Score =  117 bits (294), Expect(2) = 3e-28
 Identities = 62/130 (47%), Positives = 84/130 (63%), Gaps = 8/130 (6%)
 Frame = +3

Query: 186 NKYVLS--MSGFPYPVALTCTHMGFCSILAFVLVKGGFVEAVNI------TADTYLSCIL 341
           NKY+L   M  +P+P++LT  HM FCS LA  LV+   +  V +      T   Y S +L
Sbjct: 46  NKYILDPKMYNWPFPISLTMVHMAFCSSLAIALVR--LLRVVELPSSPAMTPQLYTSSVL 103

Query: 342 PIGLLFAGTLWLGNAAYLYLSVSFIQMLKASMPMVVFVVGVGFATEKFTTRVALNMVVVG 521
           PIG L++ +LW  N+AY+YLSVSFIQMLKA MP+ V+ +GV F  E F +   LNM+ + 
Sbjct: 104 PIGALYSLSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKENFKSSAMLNMLSIS 163

Query: 522 TGIAIASYGE 551
            G+AIA+YGE
Sbjct: 164 FGVAIAAYGE 173

 Score = 29.3 bits (64), Expect(2) = 3e-28
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 89  QGSKQQGLGMQLLVTYSYMFIWIFLSAAVI 178
           +G     +  ++LV+Y Y+ +WIFLS  VI
Sbjct: 14  EGGMSDSVIRKVLVSYMYVAVWIFLSFTVI 43



EST assemble image


clone accession position
1 CM065g03_r AV391117 1 588
2 LCL037a03_r AV628118 21 553




Chlamydomonas reinhardtii
Kazusa DNA Research Institute