KCC001579A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001579A_C01 KCC001579A_c01
gGCCACATGCGTACTGTACTTACACCACAGAGTTTTATTTCGTTTCAGGCATCCACGAAA
AGAGAAAGGAAACGTTGCGTAGGCTGTTTCGGACACACGCACTCGTGAAGTATGGCTCCG
AAGATTATCTACTTTCCCGTTCGTGGGCGTGCGGAGGCAATGAAGCTGGCGCTGGCAGCC
GTAAAGCAGGACTTCGAGTTTGAGCAGGTCGAGTACAGCACCATGAAGGCGCACCCGGAC
CAGTACCCCTTCGGCCAATGTCCCCGGCTGGTCGATGGCGACATCGACCTCGTCCAGTCC
AATGCAATCCTGCGCTACCTGGCCCGGCACTACAAGCTGTACGGCAAGGACGAGAAGGAG
ATGGGCCTGGTGGACATGATCATGGAGGGTGTGGAGTCGCTGCGTGTCAAGTACCTGGCG
CTGGTGTACCAGGAGAAGTTGGCTGACGCCGCCATGGACCAGCACTGGTCCACCCACTGC
GACCCCAACAACTCCGAGCAGCGCAACGGCGGCGCGCACCTGGTGTTTTTCAGCCGGCTG
CTGCAGCGCAACGCGGCGGGCGCCGGCAAGGTGTTCGTGGGCGCCGGTCTGACCATGGCT
GACCTGTGCGTGTTCGCATCGTGGACTGCACACCGGATCTCCCGACAGATGAAGAGTTAC
CCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001579A_C01 KCC001579A_c01
         (664 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||S13780 glutathione transferase (EC 2.5.1.18) class pi 2 - pig    104  1e-21
pdb|2GSR|A Chain A, Structure Of Porcine Class Pi Glutathione S-...   104  1e-21
sp|P80031|GTP_PIG Glutathione S-transferase P (GST P1-1) (GST cl...   104  1e-21
sp|P46424|GTP_CRILO Glutathione S-transferase P (GST class-pi) g...   100  2e-20
sp|P47954|GTP_CRIMI Glutathione S-transferase P (GST class-pi) g...    99  6e-20

>pir||S13780 glutathione transferase (EC 2.5.1.18) class pi 2 - pig
          Length = 203

 Score =  104 bits (260), Expect = 1e-21
 Identities = 67/172 (38%), Positives = 91/172 (51%)
 Frame = +1

Query: 124 IIYFPVRGRAEAMKLALAAVKQDFEFEQVEYSTMKAHPDQYPFGQCPRLVDGDIDLVQSN 303
           I YFPVRGR EAM++ LA   Q ++ E V   T         F Q P+  DGD+ L QSN
Sbjct: 5   ITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPPLKPSCLFRQLPKFQDGDLTLYQSN 64

Query: 304 AILRYLARHYKLYGKDEKEMGLVDMIMEGVESLRVKYLALVYQEKLADAAMDQHWSTHCD 483
           AILR+L R + LYGKD+KE  LVDM+ +GVE LR KY  L+Y     +A  +++      
Sbjct: 65  AILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTN--YEAGKEKY------ 116

Query: 484 PNNSEQRNGGAHLVFFSRLLQRNAAGAGKVFVGAGLTMADLCVFASWTAHRI 639
                 +    HL  F  LL +N  G   V VG+ ++ AD  +      H++
Sbjct: 117 -----VKELPEHLKPFETLLSQNQGGQAFV-VGSQISFADYNLLDLLRIHQV 162

>pdb|2GSR|A Chain A, Structure Of Porcine Class Pi Glutathione S-Transferase
           gi|1943419|pdb|2GSR|B Chain B, Structure Of Porcine
           Class Pi Glutathione S-Transferase
          Length = 207

 Score =  104 bits (260), Expect = 1e-21
 Identities = 67/172 (38%), Positives = 91/172 (51%)
 Frame = +1

Query: 124 IIYFPVRGRAEAMKLALAAVKQDFEFEQVEYSTMKAHPDQYPFGQCPRLVDGDIDLVQSN 303
           I YFPVRGR EAM++ LA   Q ++ E V   T         F Q P+  DGD+ L QSN
Sbjct: 5   ITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPPLKPSCLFRQLPKFQDGDLTLYQSN 64

Query: 304 AILRYLARHYKLYGKDEKEMGLVDMIMEGVESLRVKYLALVYQEKLADAAMDQHWSTHCD 483
           AILR+L R + LYGKD+KE  LVDM+ +GVE LR KY  L+Y     +A  +++      
Sbjct: 65  AILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTN--YEAGKEKY------ 116

Query: 484 PNNSEQRNGGAHLVFFSRLLQRNAAGAGKVFVGAGLTMADLCVFASWTAHRI 639
                 +    HL  F  LL +N  G   V VG+ ++ AD  +      H++
Sbjct: 117 -----VKELPEHLKPFETLLSQNQGGQAFV-VGSQISFADYNLLDLLRIHQV 162

>sp|P80031|GTP_PIG Glutathione S-transferase P (GST P1-1) (GST class-pi)
          Length = 207

 Score =  104 bits (260), Expect = 1e-21
 Identities = 67/172 (38%), Positives = 91/172 (51%)
 Frame = +1

Query: 124 IIYFPVRGRAEAMKLALAAVKQDFEFEQVEYSTMKAHPDQYPFGQCPRLVDGDIDLVQSN 303
           I YFPVRGR EAM++ LA   Q ++ E V   T         F Q P+  DGD+ L QSN
Sbjct: 5   ITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPPLKPSCLFRQLPKFQDGDLTLYQSN 64

Query: 304 AILRYLARHYKLYGKDEKEMGLVDMIMEGVESLRVKYLALVYQEKLADAAMDQHWSTHCD 483
           AILR+L R + LYGKD+KE  LVDM+ +GVE LR KY  L+Y     +A  +++      
Sbjct: 65  AILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTN--YEAGKEKY------ 116

Query: 484 PNNSEQRNGGAHLVFFSRLLQRNAAGAGKVFVGAGLTMADLCVFASWTAHRI 639
                 +    HL  F  LL +N  G   V VG+ ++ AD  +      H++
Sbjct: 117 -----VKELPEHLKPFETLLSQNQGGQAFV-VGSQISFADYNLLDLLRIHQV 162

>sp|P46424|GTP_CRILO Glutathione S-transferase P (GST class-pi) gi|2117748|pir||I48112
           glutathione S-transferase subunit pi - long-tailed
           hamster gi|7434045|pir||S71959 glutathione transferase
           (EC 2.5.1.18) class pi - Chinese hamster
           gi|304512|gb|AAA36986.1| glutathione S-transferase
           subunit pi gi|695303|gb|AAB39859.1| GST pi enzyme
           [Cricetulus griseus]
          Length = 210

 Score =  100 bits (249), Expect = 2e-20
 Identities = 52/104 (50%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
 Frame = +1

Query: 124 IIYFPVRGRAEAMKLALAAVKQDFEFEQVEYSTMK--AHPDQYPFGQCPRLVDGDIDLVQ 297
           I+YFPVRGR EAM++ LA   Q ++ E V   T +  +      +GQ P+  DGD+ L Q
Sbjct: 6   IVYFPVRGRCEAMRILLADQGQSWKEEVVTVETWRKGSLKSTCLYGQLPKFEDGDLTLYQ 65

Query: 298 SNAILRYLARHYKLYGKDEKEMGLVDMIMEGVESLRVKYLALVY 429
           SNAILR+L R   LYGKD++E  LVDM+ +GVE LR KY+ L+Y
Sbjct: 66  SNAILRHLGRSLGLYGKDQREAALVDMVNDGVEDLRCKYITLIY 109

>sp|P47954|GTP_CRIMI Glutathione S-transferase P (GST class-pi) gi|7434043|pir||S71957
           glutathione transferase (EC 2.5.1.18) class pi -
           Armenian hamster gi|950313|gb|AAB39861.1| GST pi enzyme
           [Cricetulus migratorius]
          Length = 210

 Score = 99.0 bits (245), Expect = 6e-20
 Identities = 63/174 (36%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
 Frame = +1

Query: 124 IIYFPVRGRAEAMKLALAAVKQDFEFEQVEYSTMK--AHPDQYPFGQCPRLVDGDIDLVQ 297
           I+YFPVRGR EAM++ LA   Q ++ E +   T    +      +GQ P+  DGD+ L Q
Sbjct: 6   IVYFPVRGRCEAMRILLADQGQSWKEEVITGETWGKGSLKSTCLYGQLPKFEDGDLTLYQ 65

Query: 298 SNAILRYLARHYKLYGKDEKEMGLVDMIMEGVESLRVKYLALVYQEKLADAAMDQHWSTH 477
           SNAILR+L R   LYGKD++E  LVDM+ +GVE LR KY+ L+Y             + +
Sbjct: 66  SNAILRHLGRSLGLYGKDQREAALVDMVNDGVEDLRCKYVTLIY-------------TKY 112

Query: 478 CDPNNSEQRNGGAHLVFFSRLLQRNAAGAGKVFVGAGLTMADLCVFASWTAHRI 639
            +  +   +    HL  F  LL +N  G   + VG  ++ AD  +      H++
Sbjct: 113 EEGKDDYVKALPGHLKPFETLLSKNQGGKAFI-VGDQISFADYNLLDLLLIHQV 165



EST assemble image


clone accession position
1 MX256b10_r BP092576 1 499
2 MX243h06_r BP091759 2 397
3 MX242g10_r BP091694 27 527
4 MX042g11_r BP087748 37 382
5 CM064h12_r AV390999 90 664




Chlamydomonas reinhardtii
Kazusa DNA Research Institute