KCC001577A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001577A_C01 KCC001577A_c01
gtgctagtgcgccGTTTTCTTTACATAATCATCTAGCAAAAATGTTCCCTGGAATGCCTG
CGGGCCCCGGTGGCCCTGGTGGTGCGGGTGCTTTCGATTTCTCTGCCCTGCAGTCGGCGC
TGAACGACCCCTCGATCAAGCAGATGGCTGAGCAGATCGCCAACGACCCCTCATTCAAGG
AGATCGCGAAGCAGATGCAAGAGAGCTTCGGCGCGATGATGGGTGGTATGCCCCCTCCAG
GCGGTGCGCCGGGCGGCGATGCGCGCGCCGCTGGGATGCCTGGTATGCCCGGCATGCCCG
GTATGCCTGGTATGCCCGGTATGCCTGGTGGCATGCCTGGTGGCATGCCTGGCATGATGC
CCGGCATGATGCCGCCCGGCTTCGACCCCTCCAAGTACATGGAGGCGATGCAGGGCATGT
TCCAGAACCCCAGCTTCATGCAGATGGCGGAGAAGCTGGGCAAGTCCATCATCGAGGCCG
AACCCAACATG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001577A_C01 KCC001577A_c01
         (491 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO32623.1| CR074 protein [Chlamydomonas reinhardtii]              317  7e-86
gb|EAA15582.1| 58 kda phosphoprotein (heat shock-related protein...    89  4e-17
gb|AAO20057.1| unknown protein [Oryza sativa (japonica cultivar-...    82  3e-15
gb|AAA80493.1| similar to Plasmodium berghei heat shock related ...    79  2e-14
gb|EAA18034.1| immediate early protein homolog [Plasmodium yoeli...    78  7e-14

>gb|AAO32623.1| CR074 protein [Chlamydomonas reinhardtii]
          Length = 368

 Score =  317 bits (811), Expect = 7e-86
 Identities = 149/150 (99%), Positives = 150/150 (99%)
 Frame = +3

Query: 42  MFPGMPAGPGGPGGAGAFDFSALQSALNDPSIKQMAEQIANDPSFKEIAKQMQESFGAMM 221
           MFPGMPAGPGGPGGAGAFDFSALQSALNDPSIKQMAEQIANDPSFKEIAKQMQESFGAMM
Sbjct: 1   MFPGMPAGPGGPGGAGAFDFSALQSALNDPSIKQMAEQIANDPSFKEIAKQMQESFGAMM 60

Query: 222 GGMPPPGGAPGGDARAAGMPGMPGMPGMPGMPGMPGGMPGGMPGMMPGMMPPGFDPSKYM 401
           GGMPPPGGAPGGDARAAGMPGMPGMPGMPGMPGMPGGMPGGMPGMMPGMMPPGFDPSKYM
Sbjct: 61  GGMPPPGGAPGGDARAAGMPGMPGMPGMPGMPGMPGGMPGGMPGMMPGMMPPGFDPSKYM 120

Query: 402 EAMQGMFQNPSFMQMAEKLGKSIIEAEPNM 491
           EAMQGMFQNPSFMQMAEKLGKSIIEA+PNM
Sbjct: 121 EAMQGMFQNPSFMQMAEKLGKSIIEADPNM 150

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
 Frame = -2

Query: 475 SMMDLPSFSAICMKLGFWNMPCIASMYLEGSKPGGIMPGIMPGMPPGMPPG----IPGIP 308
           S ++ PS   +  ++   N P    +  +  +  G M G MP  PPG  PG      G+P
Sbjct: 25  SALNDPSIKQMAEQIA--NDPSFKEIAKQMQESFGAMMGGMP--PPGGAPGGDARAAGMP 80

Query: 307 GIPGMPGIPGIPAARASPPGAPPG---GGIPPIIAP 209
           G+PGMPG+PG+P      PG  PG   G +PP   P
Sbjct: 81  GMPGMPGMPGMPGMPGGMPGGMPGMMPGMMPPGFDP 116

 Score = 33.1 bits (74), Expect = 1.9
 Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -2

Query: 430 GFWNMPCIASMYLEGSKPGGIMPGIMPGMPPGM-PPGIPGIPGIPGMPGI 284
           G   MP +  M      PGG MPG MPGM PGM PPG      +  M G+
Sbjct: 78  GMPGMPGMPGMPGMPGMPGG-MPGGMPGMMPGMMPPGFDPSKYMEAMQGM 126

>gb|EAA15582.1| 58 kda phosphoprotein (heat shock-related protein) (hrp).
           [Plasmodium yoelii yoelii]
          Length = 447

 Score = 88.6 bits (218), Expect = 4e-17
 Identities = 62/140 (44%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
 Frame = +3

Query: 45  FPG-MPAGPGGPGGAGAFDFSALQSALNDPSIKQMAEQIANDPSFKEIAKQMQESFGAMM 221
           FPG MP  PGG GG                    M   +   P        M    G M 
Sbjct: 302 FPGGMPGMPGGMGG--------------------MPGGMGGMPGM----PGMPGGMGGMP 337

Query: 222 GGMPPPGGAPGGDARAAGMP-GMPGMPGMPGMPGMPGGMPGGMPGMMPGMMPPGFDPSKY 398
           GGM  PGG PGG     GMP G PGMPGMPG  GMPGGMPGGMPG MPG MP G  P   
Sbjct: 338 GGM--PGGMPGG---MGGMPGGFPGMPGMPG--GMPGGMPGGMPGGMPGGMPGGM-PDLN 389

Query: 399 MEAMQGMFQNPSFMQMAEKL 458
              M+ +F NP F QM + +
Sbjct: 390 SPEMKELFNNPQFFQMMQNM 409

 Score = 76.6 bits (187), Expect = 1e-13
 Identities = 56/140 (40%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
 Frame = +3

Query: 48  PGMPAGPGG-PGGAGAFDFSALQSALNDPSIKQMAEQIANDPSFKEIAKQMQESFGAMMG 224
           PGMP G GG PGG G             P +  M                     G M G
Sbjct: 307 PGMPGGMGGMPGGMGGM-----------PGMPGMPG-----------------GMGGMPG 338

Query: 225 GMPPPGGAPGG-DARAAGMPGMPGMPG-----MPG-MPG-MPGGMPGGMPGMMPGMMPPG 380
           GMP  GG PGG      G PGMPGMPG     MPG MPG MPGGMPGGMP +    M   
Sbjct: 339 GMP--GGMPGGMGGMPGGFPGMPGMPGGMPGGMPGGMPGGMPGGMPGGMPDLNSPEMKEL 396

Query: 381 FDPSKYMEAMQGMFQNPSFM 440
           F+  ++ + MQ M  NP  +
Sbjct: 397 FNNPQFFQMMQNMMSNPDLI 416

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
 Frame = -2

Query: 388 GSKPGGIMPGIMPGMPPGMPPGIPGIPGIP-GMPGIPGIPAARASPPGAPPG---GGIPP 221
           G  PGG MPG MPG   GMP G PG+PG+P GMPG  G+P      PG  PG   GG+P 
Sbjct: 334 GGMPGG-MPGGMPGGMGGMPGGFPGMPGMPGGMPG--GMPGGM---PGGMPGGMPGGMPD 387

Query: 220 IIAPKL 203
           + +P++
Sbjct: 388 LNSPEM 393

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 24/47 (51%), Positives = 27/47 (57%)
 Frame = -2

Query: 373 GIMPGIMPGMPPGMPPGIPGIPGIPGMPGIPGIPAARASPPGAPPGG 233
           G  PG MPGMP GM     G+ G+PGMPG+PG        PG  PGG
Sbjct: 300 GDFPGGMPGMPGGMGGMPGGMGGMPGMPGMPG---GMGGMPGGMPGG 343

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 28/93 (30%)
 Frame = +3

Query: 45  FPGMPAGPGG-----------------PGGAGAFDFSALQSALNDPSIKQMAEQI----- 158
           FPGMP  PGG                 PGG    +   ++   N+P   QM + +     
Sbjct: 355 FPGMPGMPGGMPGGMPGGMPGGMPGGMPGGMPDLNSPEMKELFNNPQFFQMMQNMMSNPD 414

Query: 159 -----ANDPSFKEIAKQMQES-FGAMMGGMPPP 239
                A+DP +K I + ++ S  G MMGG P P
Sbjct: 415 LINKYASDPKYKNIFENLKNSDLGGMMGGKPKP 447

 Score = 38.9 bits (89), Expect = 0.035
 Identities = 23/47 (48%), Positives = 28/47 (58%), Gaps = 1/47 (2%)
 Frame = -2

Query: 361 GIMPGMPPGMPPGIPGIPGIPGMPGIPGIPAARASPPGAPPG-GGIP 224
           G  PG  PGMP G+ G+PG  GM G+PG+P       G P G GG+P
Sbjct: 300 GDFPGGMPGMPGGMGGMPG--GMGGMPGMP-------GMPGGMGGMP 337

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -2

Query: 430 GFWNMPCIASMYLEGSKPGGIMPGIMPG-MPPGMPPGIPGI 311
           GF  MP      + G  PGG MPG MPG MP GMP G+P +
Sbjct: 354 GFPGMPG-----MPGGMPGG-MPGGMPGGMPGGMPGGMPDL 388

>gb|AAO20057.1| unknown protein [Oryza sativa (japonica cultivar-group)]
          Length = 350

 Score = 82.4 bits (202), Expect = 3e-15
 Identities = 49/131 (37%), Positives = 67/131 (50%)
 Frame = +3

Query: 84  AGAFDFSALQSALNDPSIKQMAEQIANDPSFKEIAKQMQESFGAMMGGMPPPGGAPGGDA 263
           A  FDFS + + LNDPSIK+MAEQIA DP+F E+A+Q+Q++  +     PP  GA    A
Sbjct: 38  ANPFDFSTMMNLLNDPSIKEMAEQIAKDPAFTEMAEQLQKTVQS-----PPARGAAQEAA 92

Query: 264 RAAGMPGMPGMPGMPGMPGMPGGMPGGMPGMMPGMMPPGFDPSKYMEAMQGMFQNPSFMQ 443
            AA                                  P  DPSKY+  MQ + QNP F+ 
Sbjct: 93  AAAA---------------------------------PALDPSKYVSTMQQLMQNPQFVA 119

Query: 444 MAEKLGKSIIE 476
           MAE+LG ++++
Sbjct: 120 MAERLGSALMQ 130

>gb|AAA80493.1| similar to Plasmodium berghei heat shock related protein, encoded
           by GenBank Accession Number L04508, and Trypanosoma
           cruzi heat shock protein 70, Swiss-Prot Accession Number
           P05456
          Length = 173

 Score = 79.3 bits (194), Expect = 2e-14
 Identities = 54/101 (53%), Positives = 58/101 (56%), Gaps = 18/101 (17%)
 Frame = +3

Query: 210 GAMMGGMPP--PGGAPGGDARAAGMPG-----MPG-MPG-MPG-MPG-MPGGMPGGMPGM 356
           G M GGMP   PGG PGG     GMPG     MPG MPG MPG MPG MPGGMPGGMPG 
Sbjct: 71  GGMPGGMPGGFPGGFPGG--MPGGMPGGFPGGMPGGMPGGMPGGMPGGMPGGMPGGMPGG 128

Query: 357 MPGMMP-------PGFDPSKYMEAMQGMFQNPSFMQMAEKL 458
           MPG MP       PG  P      M+ +F NP F QM + +
Sbjct: 129 MPGGMPGGMPGGMPGGMPDLNSPEMKELFNNPQFFQMMQNM 169

 Score = 68.2 bits (165), Expect = 5e-11
 Identities = 43/79 (54%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
 Frame = +3

Query: 210 GAMMGGMPP--PGGAPGGDARAAGMPGMPGMPG-MPG-MPG-MPGGMPGGMPGMMPGMMP 374
           G M GGMP   PGG PGG     GMPG  GMPG MPG MPG MPGGMPGGMP +    M 
Sbjct: 99  GGMPGGMPGGMPGGMPGG--MPGGMPG--GMPGGMPGGMPGGMPGGMPGGMPDLNSPEMK 154

Query: 375 PGFDPSKYMEAMQGMFQNP 431
             F+  ++ + MQ M  NP
Sbjct: 155 ELFNNPQFFQMMQNMMSNP 173

 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
 Frame = -2

Query: 394 LEGSKPGGIMPGIMPGMPPGMPPGIP-GIPGIPGMPGIPGIPAAR-ASPPGAPPG---GG 230
           + G  PGG   G+  GMP GMP G+P G+PG  GMPG  G+P       PG  PG   GG
Sbjct: 89  MPGGMPGGFPGGMPGGMPGGMPGGMPGGMPG--GMPG--GMPGGMPGGMPGGMPGGMPGG 144

Query: 229 IPPIIAPKL 203
           +P + +P++
Sbjct: 145 MPDLNSPEM 153

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 27/55 (49%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -2

Query: 394 LEGSKPGGIMPGIMPGMPPGMPPGIP-GIPGIPGMPGIPGIPAARASPPGAPPGG 233
           + G  PGG   G   GMP GMP G P G+PG  GMPG  G+P      PG  PGG
Sbjct: 73  MPGGMPGGFPGGFPGGMPGGMPGGFPGGMPG--GMPG--GMPGGM---PGGMPGG 120

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 22/35 (62%), Positives = 22/35 (62%)
 Frame = +3

Query: 318 GMPGGMPGGMPGMMPGMMPPGFDPSKYMEAMQGMF 422
           GMPGGMPGGMPG MPG  P GF P      M G F
Sbjct: 64  GMPGGMPGGMPGGMPGGFPGGF-PGGMPGGMPGGF 97

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 31/55 (56%), Positives = 32/55 (57%), Gaps = 3/55 (5%)
 Frame = -2

Query: 388 GSKPGGIMPGIMPG-MPPGMPPGIP-GIPGIPGMPGIPGIPAA-RASPPGAPPGG 233
           G  PGG MPG MPG MP GMP G P G PG  GMPG  G+P       PG  PGG
Sbjct: 59  GDFPGG-MPGGMPGGMPGGMPGGFPGGFPG--GMPG--GMPGGFPGGMPGGMPGG 108

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 26/55 (47%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -2

Query: 394 LEGSKPGGIMPGIMPGMPPGMPPGIP-GIPGIPGMPGIPGIPAARASPPGAPPGG 233
           + G  PGG+  G   G P GMP G+P G PG  GMPG  G+P      PG  PGG
Sbjct: 69  MPGGMPGGMPGGFPGGFPGGMPGGMPGGFPG--GMPG--GMPGGM---PGGMPGG 116

 Score = 42.0 bits (97), Expect = 0.004
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = +3

Query: 324 PGGMPGGMPGMMPGMMPPGFDPSKYMEAMQG 416
           PGGMPGGMPG MPG MP GF P  +   M G
Sbjct: 62  PGGMPGGMPGGMPGGMPGGF-PGGFPGGMPG 91

 Score = 40.8 bits (94), Expect = 0.009
 Identities = 27/55 (49%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -2

Query: 394 LEGSKPGGIMPGIMPG-MPPGMPPGIPGIPGIPGMPGIPGIPAARASPPGAPPGG 233
           + G  PGG MPG MPG  P G P G+PG  G+PG  G PG        PG  PGG
Sbjct: 65  MPGGMPGG-MPGGMPGGFPGGFPGGMPG--GMPG--GFPG--GMPGGMPGGMPGG 112

 Score = 31.6 bits (70), Expect = 5.5
 Identities = 21/46 (45%), Positives = 23/46 (49%), Gaps = 2/46 (4%)
 Frame = -2

Query: 364 PGIMPGMPPGMPPGIP-GIPGIPGMPGIPGIPAA-RASPPGAPPGG 233
           P      P GMP G+P G+PG  GMPG  G P       PG  PGG
Sbjct: 55  PDFSGDFPGGMPGGMPGGMPG--GMPG--GFPGGFPGGMPGGMPGG 96

>gb|EAA18034.1| immediate early protein homolog [Plasmodium yoelii yoelii]
          Length = 802

 Score = 77.8 bits (190), Expect = 7e-14
 Identities = 59/121 (48%), Positives = 66/121 (53%), Gaps = 15/121 (12%)
 Frame = +3

Query: 168 PSFKEIAKQMQESFGAMMG--GMPPPG--GAPGGDARAAGMPGMPGMPGMPGMPGMPG-- 329
           PS  E+ KQM + FG  M   G P PG  G PG      GMPGMPGMPGMPGMP MPG  
Sbjct: 560 PSQDEM-KQMLKMFGKAMQQQGRPMPGMPGMPG----MPGMPGMPGMPGMPGMPRMPGMP 614

Query: 330 GMPG--GMPGMMPGMMPPGFDPSKYM-----EAMQGMFQNP--SFMQMAEKLGKSIIEAE 482
           GMPG  GMPG MPGM  P  D  K M     +AM GM   P     QM +  G+ + +  
Sbjct: 615 GMPGMPGMPG-MPGMPMPSQDEMKQMLKMFGKAMPGMPMPPPGDLSQMLKMFGQMMQQGN 673

Query: 483 P 485
           P
Sbjct: 674 P 674

 Score = 54.7 bits (130), Expect = 6e-07
 Identities = 26/36 (72%), Positives = 31/36 (85%), Gaps = 4/36 (11%)
 Frame = -2

Query: 367 MPGIMPGMP--PGMP--PGIPGIPGIPGMPGIPGIP 272
           MPG MPGMP  PGMP  PG+PG+PG+PGMPG+PG+P
Sbjct: 595 MPG-MPGMPGMPGMPRMPGMPGMPGMPGMPGMPGMP 629

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 26/42 (61%), Positives = 31/42 (72%), Gaps = 4/42 (9%)
 Frame = -2

Query: 367 MPGIMPGMP--PGMP--PGIPGIPGIPGMPGIPGIPAARASP 254
           MPG MPGMP  PGMP  PG+P +PG+PGMPG+PG+P     P
Sbjct: 589 MPG-MPGMPGMPGMPGMPGMPRMPGMPGMPGMPGMPGMPGMP 629

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
 Frame = -2

Query: 355 MPGMPPGMPPGIPGIPGIPGMPGIPGIPAARASP--PGAPPGGGIP 224
           MPGMP     G+PG+PG+PGMPG+PG+P     P  PG P   G+P
Sbjct: 583 MPGMP-----GMPGMPGMPGMPGMPGMPGMPRMPGMPGMPGMPGMP 623

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 38/125 (30%), Positives = 48/125 (38%), Gaps = 16/125 (12%)
 Frame = +3

Query: 48  PGMPAGPGGPGGAGAFDFSALQSALNDPSIKQMAEQIANDPSFKEIAKQMQESFGAMMGG 227
           PGMP  PG PG  G      +      P +  M          ++  KQM + FG  M G
Sbjct: 590 PGMPGMPGMPGMPGMPGMPRMPGMPGMPGMPGMPGMPGMPMPSQDEMKQMLKMFGKAMPG 649

Query: 228 MP-PPGGAPGGDARAAGMPGMPGMPG-----------MPGMPGMPGGMPG----GMPGMM 359
           MP PP G      +  G     G PG           MP MPG+   +P     G+PG+ 
Sbjct: 650 MPMPPPGDLSQMLKMFGQMMQQGNPGSGHHGRGKKQNMPQMPGISQLLPMMNMLGLPGVN 709

Query: 360 PGMMP 374
           P   P
Sbjct: 710 PFSKP 714



EST assemble image


clone accession position
1 LC068b02_r AV623746 1 491
2 CM064g04_r AV390991 5 633
3 LCL038g01_r AV628226 23 308




Chlamydomonas reinhardtii
Kazusa DNA Research Institute