Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001568A_C01 KCC001568A_c01
(1117 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens] 41 0.033
ref|ZP_00056433.1| COG0758: Predicted Rossmann fold nucleotide-b... 41 0.043
ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyc... 41 0.043
dbj|BAC87637.1| unnamed protein product [Homo sapiens] 40 0.074
dbj|BAC79845.1| putative MSP1(mitochondrial sorting of proteins)... 40 0.096
>ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]
Length = 250
Score = 41.2 bits (95), Expect = 0.033
Identities = 52/185 (28%), Positives = 62/185 (33%)
Frame = +3
Query: 138 ATPATCPGAAGVGLAHAG*WREKSRRRQPPRAKAAAAVHRPCARSASPATRRAARPNGRV 317
A+PA P A G S RR PPRA A R R P P
Sbjct: 43 ASPARTPPRASPGRTPP----RASPRRTPPRASPRRAPPRASPRRTPPTASPTRTPPTES 98
Query: 318 PCRTVVWALSYPLGYSNGLRRCRTATVYTHLRNA*MHLRRPAWPFRKAATRTWPAACGAW 497
P RT A RT + + R P R + TRT P A
Sbjct: 99 PARTPPTA-----------SPARTPSRASPRRT----------PPRASPTRTPPRASPRR 137
Query: 498 GFQSQTPATRPSAGTSARS*PRSIYTRRP*T*PRGSYRTRPWSAGPPPSPCTSAHAS*SP 677
+P P + R+ PR+ R P PR S P A P +P T + A P
Sbjct: 138 TPPRASPRRTPPRASPTRAPPRASPKRTP---PRASPTRTPPRASPTRTPPTESPARTPP 194
Query: 678 QRSPA 692
SPA
Sbjct: 195 TASPA 199
Score = 37.7 bits (86), Expect = 0.37
Identities = 30/97 (30%), Positives = 41/97 (41%), Gaps = 15/97 (15%)
Frame = +3
Query: 447 PFRKAATRTWPAACGAWGFQSQTPATRPSAGTSARS*PRSIYTRRP-------------- 584
P+ + TRT P A A +++PA P + AR+ PR+ R P
Sbjct: 4 PYTTSLTRTPPTASPARTPPTESPARTPPTASPARTPPRASPARTPPRASPGRTPPRASP 63
Query: 585 -*T*PRGSYRTRPWSAGPPPSPCTSAHAS*SPQRSPA 692
T PR S R P A P +P T++ P SPA
Sbjct: 64 RRTPPRASPRRAPPRASPRRTPPTASPTRTPPTESPA 100
Score = 35.4 bits (80), Expect = 1.8
Identities = 54/200 (27%), Positives = 65/200 (32%)
Frame = +3
Query: 69 PTSSATACT*AAAVRSRACGTCVATPATCPGAAGVGLAHAG*WREKSRRRQPPRAKAAAA 248
PT+S T S A A+PA P A S RR PPRA
Sbjct: 86 PTASPTR---TPPTESPARTPPTASPARTPSRA-------------SPRRTPPRASPTRT 129
Query: 249 VHRPCARSASPATRRAARPNGRVPCRTVVWALSYPLGYSNGLRRCRTATVYTHLRNA*MH 428
R R P P P R P S R + T
Sbjct: 130 PPRASPRRTPPRASPRRTPPRASPTRA-------PPRASPKRTPPRASPTRT-------- 174
Query: 429 LRRPAWPFRKAATRTWPAACGAWGFQSQTPATRPSAGTSARS*PRSIYTRRP*T*PRGSY 608
P R + TRT P A + +PA PS + R PR+ TR P PR S
Sbjct: 175 ------PPRASPTRTPPTESPARTPPTASPARTPSRASPRRMPPRASPTRTP---PRASP 225
Query: 609 RTRPWSAGPPPSPCTSAHAS 668
P A P +P T++ S
Sbjct: 226 TRTPPRASPKRTPPTASPTS 245
>ref|ZP_00056433.1| COG0758: Predicted Rossmann fold nucleotide-binding protein
involved in DNA uptake [Magnetospirillum
magnetotacticum]
Length = 684
Score = 40.8 bits (94), Expect = 0.043
Identities = 56/193 (29%), Positives = 73/193 (37%), Gaps = 28/193 (14%)
Frame = -3
Query: 605 RSPWSGLGAPRIDAAGSGS------RRSTCRGACSRGL*LETPSATGSGPCTRRRLPERP 444
R P G G + G GS R C SR L P+A G RRR R
Sbjct: 32 RRPLGGCGGRQYPGGGIGSGHLSHCRAEGCAAPDSRHL---RPAARGDAHPDRRRHRYRR 88
Query: 443 CRSPQVHLCISQMCVNRRRSASPQAV*VAQW--------IG*SPHHRTARDPPIRSGSAS 288
P VH + V RR + Q+ + + +G + ++A DPP R+ + +
Sbjct: 89 MPPPVVH---RRRGVTRRGAGFDQSAHLIAYGQYRRSPLLGWRLYGQSALDPPGRAAARN 145
Query: 287 RCRGSASCTGPVHCSRSLRPRRLPPPAFLPPSAGVSQ-------PDASG-------PRAG 150
+CRGS GP + PRR P P AG SQ P A G P G
Sbjct: 146 QCRGS----GPGD-AEPAAPRR-PAAQGWAPGAGPSQRSGLQRLPGARGQRHRDHQPSGG 199
Query: 149 GRGSNACPTRPAA 111
R RPA+
Sbjct: 200 RRHDQGAAARPAS 212
>ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680] gi|29605870|dbj|BAC69934.1| putative
protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680]
Length = 474
Score = 40.8 bits (94), Expect = 0.043
Identities = 49/177 (27%), Positives = 66/177 (36%), Gaps = 10/177 (5%)
Frame = +3
Query: 129 TCVATPATCPGAAGVGLAHAG*WREKSRRRQPPRAKAAAAVHRP----CARSASPATRRA 296
T PA+ AA L G RR PPR+ A + P CAR + RR
Sbjct: 319 TAAVGPASPKAAASSCLPSTG--APSRHRRSPPRSGAGSRTRTPTCWCCARRSGGTARRR 376
Query: 297 ARPNGRVPCRTVVWALSYPLGYSNGLRRCRTATVYTHLRNA*MHLRRPAWPFRK--AATR 470
+ A + P +++ C RRPAWP R+ AA+
Sbjct: 377 SS------------AGTTPASWTSRATTCA---------------RRPAWPPRRSPAASP 409
Query: 471 TWPAACGAWGFQSQTPATRPSAGTSARS*PRSIYTRRP*T----*PRGSYRTRPWSA 629
P AC + S T P++ T++ S P S R T P RT PWS+
Sbjct: 410 AGPTACRS--TPSATTRAWPASATTSPSCPASPSAARRTTASASRPASPARTPPWSS 464
>dbj|BAC87637.1| unnamed protein product [Homo sapiens]
Length = 286
Score = 40.0 bits (92), Expect = 0.074
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +3
Query: 465 TRTWPAACGAWGFQSQTPATRPSAGTSARS*PRSIYTRRP*T*PRGSYRTRPWSAGPPPS 644
TRT P A A +++PA P + AR+ PR+ TR P PR S R P +A P +
Sbjct: 91 TRTPPTASPARTPPTESPARTPPTASPARTPPRASPTRTP---PRASPRRTPSTASPTRT 147
Query: 645 PCTSAHAS*SPQRSP 689
P ++ P+ SP
Sbjct: 148 PPRASPRRTPPRASP 162
Score = 33.9 bits (76), Expect = 5.3
Identities = 48/166 (28%), Positives = 63/166 (37%), Gaps = 5/166 (3%)
Frame = +3
Query: 207 SRRRQPPRAKAA-----AAVHRPCARSASPATRRAARPNGRVPCRTVVWALSYPLGYSNG 371
S RR PPRA A++ RP R+ P TR P P RT A P
Sbjct: 53 SPRRTPPRASPRRTPPRASLTRPPTRA--PPTRM---PPTAPPTRTPPTAS--PARTPPT 105
Query: 372 LRRCRTATVYTHLRNA*MHLRRPAWPFRKAATRTWPAACGAWGFQSQTPATRPSAGTSAR 551
RT + R P R + TRT P A + +P P + R
Sbjct: 106 ESPARTPPTASPART----------PPRASPTRTPPRASPRRTPSTASPTRTPPRASPRR 155
Query: 552 S*PRSIYTRRP*T*PRGSYRTRPWSAGPPPSPCTSAHAS*SPQRSP 689
+ PR+ TR P PR S + P A P +P ++ P+ SP
Sbjct: 156 TPPRASPTRTP---PRASPKRTPPRASPRRTPPRASPTRAPPRASP 198
>dbj|BAC79845.1| putative MSP1(mitochondrial sorting of proteins) protein [Oryza
sativa (japonica cultivar-group)]
Length = 1081
Score = 39.7 bits (91), Expect = 0.096
Identities = 34/95 (35%), Positives = 42/95 (43%), Gaps = 16/95 (16%)
Frame = +3
Query: 99 AAAVRSRACGTCVATPATCPGAAGVGLAHAG*WREKSRRRQPPRAKAAAAVHRPCARS-A 275
+AA + RA A+PAT AAG G A + RRR RAKA A V P A++
Sbjct: 7 SAAAKRRASSEEAASPATDGAAAGAGAAGS----STPRRRSGKRAKAEATVGTPAAKAGG 62
Query: 276 SPATRRA---------------ARPNGRVPCRTVV 335
+ AT A ARP G VP + V
Sbjct: 63 ADATAAAAIDVIDSSVENLHGVARPTGAVPASSTV 97
