Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001557A_C01 KCC001557A_c01
(588 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_857265.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis sub... 37 6e-04
ref|XP_327615.1| predicted protein [Neurospora crassa] gi|289240... 45 0.001
ref|NP_629941.1| putative ABC transporter [Streptomyces coelicol... 45 0.001
ref|NP_855139.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis sub... 44 0.001
ref|NP_335949.1| PE_PGRS family protein [Mycobacterium tuberculo... 44 0.001
>ref|NP_857265.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis subsp. bovis AF2122/97]
gi|31620369|emb|CAD95812.1| PE-PGRS FAMILY PROTEIN
[Mycobacterium bovis subsp. bovis AF2122/97]
Length = 492
Score = 36.6 bits (83), Expect(2) = 6e-04
Identities = 23/59 (38%), Positives = 30/59 (49%)
Frame = +2
Query: 89 GGAGHHATARASGAATPNPGATAAGSGPTMTAAGPPAASAAPAQPKQQPASPVTPEVVS 265
GGAG A A+GAA NP AG G +M G P A+ A +P +PV V++
Sbjct: 220 GGAGGLGAAGAAGAAGVNPLTVPAGQG-SMGNNGEPGGPASQAPSSGKPVAPVALAVLA 277
Score = 28.1 bits (61), Expect(2) = 6e-04
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 1 EGGQLAGQGGA-GQGLARQRDGGRGGPAPAG 90
+GG L G GGA G G A GG GG AG
Sbjct: 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAG 211
>ref|XP_327615.1| predicted protein [Neurospora crassa] gi|28924094|gb|EAA33251.1|
predicted protein [Neurospora crassa]
Length = 355
Score = 44.7 bits (104), Expect = 0.001
Identities = 26/55 (47%), Positives = 28/55 (50%)
Frame = +2
Query: 80 RQPGGAGHHATARASGAATPNPGATAAGSGPTMTAAGPPAASAAPAQPKQQPASP 244
+Q GG G S A TP PG G G T TAAG PAASAAP P+ P
Sbjct: 137 QQAGGQGGQPMEIDSAAPTPMPGG---GGGGTATAAGTPAASAAPTPAASGPSGP 188
>ref|NP_629941.1| putative ABC transporter [Streptomyces coelicolor A3(2)]
gi|7480352|pir||T35192 probable ABC transporter -
Streptomyces coelicolor gi|3036883|emb|CAA18516.1|
putative ABC transporter [Streptomyces coelicolor A3(2)]
Length = 744
Score = 44.7 bits (104), Expect = 0.001
Identities = 28/75 (37%), Positives = 36/75 (47%), Gaps = 7/75 (9%)
Frame = +2
Query: 41 GSRDNVTVVVVDLRQPGG-------AGHHATARASGAATPNPGATAAGSGPTMTAAGPPA 199
G D V V R PG +GH A S +A P PG + SGP+ A GPPA
Sbjct: 352 GDGDGPASVAVPNRTPGPRQAPAPVSGHGPEAAPSPSA-PAPGPSEPASGPSAPAPGPPA 410
Query: 200 ASAAPAQPKQQPASP 244
+A P+ P P++P
Sbjct: 411 PAAGPSAPAPGPSAP 425
Score = 39.7 bits (91), Expect = 0.032
Identities = 17/44 (38%), Positives = 24/44 (53%)
Frame = +2
Query: 119 ASGAATPNPGATAAGSGPTMTAAGPPAASAAPAQPKQQPASPVT 250
ASG + P PG A +GP+ A GP A + P+ P P+ P +
Sbjct: 398 ASGPSAPAPGPPAPAAGPSAPAPGPSAPAGGPSAPAPGPSEPAS 441
Score = 38.1 bits (87), Expect = 0.092
Identities = 18/55 (32%), Positives = 27/55 (48%)
Frame = +2
Query: 110 TARASGAATPNPGATAAGSGPTMTAAGPPAASAAPAQPKQQPASPVTPEVVSDAD 274
+A A G P G +A GP+ A GP A + P++P P++P DA+
Sbjct: 402 SAPAPGPPAPAAGPSAPAPGPSAPAGGPSAPAPGPSEPASGPSAPAPGPSALDAE 456
Score = 33.1 bits (74), Expect = 3.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 86 PGGAGHHATARASGAATPNPGATAAGSGPTMTAAGPPAASAAP 214
P +A A G + P PG + SGP+ A GP A A P
Sbjct: 415 PSAPAPGPSAPAGGPSAPAPGPSEPASGPSAPAPGPSALDAEP 457
>ref|NP_855139.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis subsp. bovis AF2122/97]
gi|31618236|emb|CAD96154.1| PE-PGRS FAMILY PROTEIN
[Mycobacterium bovis subsp. bovis AF2122/97]
Length = 795
Score = 44.3 bits (103), Expect = 0.001
Identities = 31/82 (37%), Positives = 37/82 (44%)
Frame = +1
Query: 1 EGGQLAGQGGAGQGLARQRDGGRGGPAPAGRRGAPCHSPCQRGCDTQSGCNGRGIRADHD 180
+GG LAG GGAG R DGG GG +G GA + +RG D G NG G+
Sbjct: 544 DGGTLAGNGGAGGTGGRGADGGLGG---SGAEGANATTAGERGQDGGKGGNG-GVGGTGG 599
Query: 181 SCRAAGRQCGTSATEAAAGFPG 246
+ A G G GF G
Sbjct: 600 NAVAPGANGGHGGNGGNPGFSG 621
>ref|NP_335949.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13881115|gb|AAK45763.1| PE_PGRS family protein
[Mycobacterium tuberculosis CDC1551]
Length = 738
Score = 44.3 bits (103), Expect = 0.001
Identities = 31/82 (37%), Positives = 37/82 (44%)
Frame = +1
Query: 1 EGGQLAGQGGAGQGLARQRDGGRGGPAPAGRRGAPCHSPCQRGCDTQSGCNGRGIRADHD 180
+GG LAG GGAG R DGG GG +G GA + +RG D G NG G+
Sbjct: 534 DGGTLAGNGGAGGTGGRGADGGLGG---SGAEGANATTAGERGQDGGKGGNG-GVGGTGG 589
Query: 181 SCRAAGRQCGTSATEAAAGFPG 246
+ A G G GF G
Sbjct: 590 NAVAPGANGGHGGNGGNPGFSG 611
Score = 31.6 bits (70), Expect = 8.6
Identities = 29/90 (32%), Positives = 32/90 (35%), Gaps = 4/90 (4%)
Frame = +1
Query: 16 AGQGGAGQGLARQRDGGRGGPAPAGR----RGAPCHSPCQRGCDTQSGCNGRGIRADHDS 183
AG GG G GG GG AG +GA +P G G G G A
Sbjct: 421 AGAGGHGGNGGNPGTGGAGGTGGAGSITGAQGAIGATPTSGG---NGGAGGNGANAT--- 474
Query: 184 CRAAGRQCGTSATEAAAGFPGDARGSVGRG 273
T+ T A G PG G VG G
Sbjct: 475 ---------TAGTNGANGGPGGHGGLVGNG 495
Score = 31.6 bits (70), Expect = 8.6
Identities = 27/90 (30%), Positives = 28/90 (31%)
Frame = +1
Query: 4 GGQLAGQGGAGQGLARQRDGGRGGPAPAGRRGAPCHSPCQRGCDTQSGCNGRGIRADHDS 183
GG L G GG GG GGP P G G G G G G
Sbjct: 248 GGTLYGAGG---------HGGAGGPGPIGGVGGHGGVGGAAGLLGVGGHGGAGGHGAEGV 298
Query: 184 CRAAGRQCGTSATEAAAGFPGDARGSVGRG 273
AAG T G G+ GRG
Sbjct: 299 AGAAGEDLSPHGTSGGVGGDAGDGGAGGRG 328
