Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001552A_C01 KCC001552A_c01
(663 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194498.1| expressed protein [Arabidopsis thaliana] gi|748... 104 1e-21
ref|NP_200166.1| 26S proteasome regulatory particle chain RPT6-r... 101 1e-20
ref|NP_588013.1| yeast msp1 protein homolog; putative intra-mito... 98 1e-19
gb|AAL57218.1|AF361493_1 FNP001 [Homo sapiens] 92 9e-18
ref|NP_116199.2| hypothetical protein FLJ14600 [Homo sapiens] gi... 92 9e-18
>ref|NP_194498.1| expressed protein [Arabidopsis thaliana] gi|7487509|pir||T05873
hypothetical protein T29A15.170 - Arabidopsis thaliana
gi|4469019|emb|CAB38280.1| putative protein [Arabidopsis
thaliana] gi|7269622|emb|CAB81418.1| putative protein
[Arabidopsis thaliana] gi|20260328|gb|AAM13062.1|
putative protein [Arabidopsis thaliana]
gi|21553404|gb|AAM62497.1| 26S proteasome regulatory
particle chain RPT6-like protein [Arabidopsis thaliana]
gi|23197836|gb|AAN15445.1| putative protein [Arabidopsis
thaliana]
Length = 398
Score = 104 bits (259), Expect = 1e-21
Identities = 56/116 (48%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Frame = +1
Query: 241 LQYLDPYREQREQAKKRAAFLKRHLGRTL-ELNEFEQLLAAQVMNPDHIEVEMGDVSGLE 417
L++LDP RE ++A + + + LGR L + N +E ++A V+NPDHI+VE G + GLE
Sbjct: 31 LRHLDPNREASKKALEHKKEISKRLGRPLVQTNPYEDVIACDVINPDHIDVEFGSIGGLE 90
Query: 418 DIVADLETTVLYPLLRPELYR-TTLWKQANGVLLYGPPGTGETMLAKALARQSPAI 582
I L V+ PL RPEL+ L GVLLYGPPGTG+TMLAKA+A++S A+
Sbjct: 91 TIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAV 146
>ref|NP_200166.1| 26S proteasome regulatory particle chain RPT6-related protein
[Arabidopsis thaliana] gi|9759193|dbj|BAB09730.1| 26S
proteasome regulatory particle chain RPT6-like protein
[Arabidopsis thaliana] gi|16604478|gb|AAL24245.1|
AT5g53540/MNC6_8 [Arabidopsis thaliana]
gi|27363282|gb|AAO11560.1| At5g53540/MNC6_8 [Arabidopsis
thaliana]
Length = 403
Score = 101 bits (251), Expect = 1e-20
Identities = 57/130 (43%), Positives = 84/130 (63%), Gaps = 2/130 (1%)
Frame = +1
Query: 199 AVALGAMIWGLKICLQYLDPYREQREQAKKRAAFLKRHLGRTL-ELNEFEQLLAAQVMNP 375
+ AL +++ L + L+ LDP R+ +++ + + + LGR L + N++E ++A V+NP
Sbjct: 22 SAALSSLV--LYVGLRQLDPNRDAAKKSLEHKREIAKRLGRPLIQTNQYEDVIACDVINP 79
Query: 376 DHIEVEMGDVSGLEDIVADLETTVLYPLLRPELYR-TTLWKQANGVLLYGPPGTGETMLA 552
HI+VE G + GLE I L V+ PL RPEL+ L GVLLYGPPGTG+TMLA
Sbjct: 80 LHIDVEFGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLA 139
Query: 553 KALARQSPAI 582
KA+AR+S A+
Sbjct: 140 KAIARESEAV 149
>ref|NP_588013.1| yeast msp1 protein homolog; putative intra-mitochondrial sorting
protein, AAA family of ATPase [Schizosaccharomyces
pombe] gi|11359201|pir||T50417 MSP1 protein homolog
[imported] - fission yeast (Schizosaccharomyces pombe)
gi|7160255|emb|CAB76219.1| SPCC24B10.10c
[Schizosaccharomyces pombe]
Length = 355
Score = 98.2 bits (243), Expect = 1e-19
Identities = 59/141 (41%), Positives = 82/141 (57%), Gaps = 9/141 (6%)
Frame = +1
Query: 184 EVATQAVALGAMIWGLKICLQYLDPYREQREQA-KKRAAFLKRHLGR------TLELNEF 342
E+ A+A G + L LDPYR++R+ K L G TLELNE+
Sbjct: 11 EIVVYALAFGCSWYAAHKLLSTLDPYRQKRQDTVSKSRKRLDEWAGEQVKELETLELNEY 70
Query: 343 EQLLAAQVMNPDHIEVEMGDVSGLEDIVADLETTVLYPLLRPELYRT--TLWKQANGVLL 516
EQ++A+Q++ P I+V D+ G+++ V L VL+PL PE++ T L G+LL
Sbjct: 71 EQIVASQLVLPSEIDVSFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLL 130
Query: 517 YGPPGTGETMLAKALARQSPA 579
YGPPG G+TMLAKALA+QS A
Sbjct: 131 YGPPGCGKTMLAKALAKQSQA 151
>gb|AAL57218.1|AF361493_1 FNP001 [Homo sapiens]
Length = 361
Score = 91.7 bits (226), Expect = 9e-18
Identities = 43/117 (36%), Positives = 82/117 (69%), Gaps = 2/117 (1%)
Frame = +1
Query: 229 LKICLQYLDPYREQREQAKKRAAFLKRHLG-RTLELNEFEQLLAAQVMNPDHIEVEMGDV 405
+K + +DP R+Q+ +A+K+A L + +G + ++L+E+E +AA +++P ++ V D+
Sbjct: 34 IKWMVDAIDPTRKQKVEAQKQAEKLMKQIGVKNVKLSEYEMSIAAHLVDPLNMHVTWSDI 93
Query: 406 SGLEDIVADLETTVLYPLLRPELYRTT-LWKQANGVLLYGPPGTGETMLAKALARQS 573
+GL+D++ DL+ TV+ P+ + L+ + L + GVLLYGPPG G+T++AKA A+++
Sbjct: 94 AGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEA 150
>ref|NP_116199.2| hypothetical protein FLJ14600 [Homo sapiens]
gi|31560168|ref|NP_080763.2| RIKEN cDNA 4921525H23 [Mus
musculus] gi|12853110|dbj|BAB29643.1| unnamed protein
product [Mus musculus] gi|22137685|gb|AAH29085.1| RIKEN
cDNA 4921525H23 [Mus musculus]
gi|22761173|dbj|BAC11482.1| unnamed protein product
[Homo sapiens] gi|26326707|dbj|BAC27097.1| unnamed
protein product [Mus musculus]
gi|26329327|dbj|BAC28402.1| unnamed protein product [Mus
musculus] gi|28175431|gb|AAH43051.1| 4921525H23Rik
protein [Mus musculus]
Length = 361
Score = 91.7 bits (226), Expect = 9e-18
Identities = 43/117 (36%), Positives = 82/117 (69%), Gaps = 2/117 (1%)
Frame = +1
Query: 229 LKICLQYLDPYREQREQAKKRAAFLKRHLG-RTLELNEFEQLLAAQVMNPDHIEVEMGDV 405
+K + +DP R+Q+ +A+K+A L + +G + ++L+E+E +AA +++P ++ V D+
Sbjct: 34 IKWMVDAIDPTRKQKVEAQKQAEKLMKQIGVKNVKLSEYEMSIAAHLVDPLNMHVTWSDI 93
Query: 406 SGLEDIVADLETTVLYPLLRPELYRTT-LWKQANGVLLYGPPGTGETMLAKALARQS 573
+GL+D++ DL+ TV+ P+ + L+ + L + GVLLYGPPG G+T++AKA A+++
Sbjct: 94 AGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEA 150
