KCC001547A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001547A_C01 KCC001547A_c01
CTGACTCGTGCATACGGAACAACGACTTCTGGAGGGCCTCGGCGTCACGCACTGAAAAGC
CCCAACGGCCATGCAGGCCAAGTTTCTTGCCCTCGCTTTGGCGGGGCTGGTCGGCCTGTC
GTGCGCACATGCACTGCTCTCTTCAGCCGACATGCTGGCCCTGGCTCAGGTTGAGCCGGA
GCGTGCATTTGGGCTGTGGGCGACTCAGCACGCGCGCACATACAGCGAGGGATCTCCGGA
GTACACTCGGCGCCTGGGTGTGTTTGCGGACAACGTGAGGGCCATTGCGGAGCAGAACAG
GCGCAACACGGGCATCACGCTGGCTCTTAACGAGTACGCGGATGAGACGTGGGAGGAGTT
CGCGGCCAAGCGCCTAGGCCTCAAGATCTCCCAGGAGCAGCTGAAGGCCAGGGAGGCTCG
CAGCAGCAGCAGCAGCAGTAGCAGCTGGCGCTATGCCCAGGTGCAGACGCCCGCGGCTGT
GGACTGGCGTGCCAAGAACGCCGTGACCCAGGTCAAGAACCAGGGCCAGTGCGGTTCCTG
CTGGGCCTTCTCCGCGGTGGGCTCCATCGAGGGCGCCAACGCGCTCGCCACCGGGCAGCT
GGTGGCGCTCAGCGAGCAGCAGCTGGTGGACTGCGACACTGCCTCCAACATGGGCTGCAG
CGGCGGCCTTATGGACGACGCCTTCAAGTACGTGCTGGACAACGGCGGCATTGACACCGA
GGAAGACTACAGCTACTGGAGCGGGTACGGGTTCGGCTTCTGGTGCAACAAGCGCAAGCA
GACCGACAGGCCTGCTGTGTCCATTGACGGCTACGAGGACGTGCCCACCAGCGAGCCCGC
GCTGCTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001547A_C01 KCC001547A_c01
         (847 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK48495.1|AF259983_1 putative cysteine protease [Ipomoea bat...   194  2e-48
dbj|BAB63672.1| putative cysteine proteinase [Oryza sativa (japo...   187  1e-46
gb|AAL60578.1|AF454956_1 senescence-associated cysteine protease...   187  2e-46
dbj|BAC75923.1| cysteine protease-1 [Helianthus annuus]               186  3e-46
pir||T12041 cysteine proteinase (EC 3.4.22.-) 3 precursor - kidn...   184  2e-45

>gb|AAK48495.1|AF259983_1 putative cysteine protease [Ipomoea batatas]
          Length = 462

 Score =  194 bits (493), Expect = 2e-48
 Identities = 118/274 (43%), Positives = 157/274 (57%), Gaps = 18/274 (6%)
 Frame = +2

Query: 77  AKFLALALAGLVGLSCAHALLSSADMLALAQVEPERAFGL-------------WATQHAR 217
           AK L L+L  L  +S A A   SADM  +   E   A GL             W  +H +
Sbjct: 2   AKLLILSLFVLAAVSSASA---SADMSIITYDEEHPAKGLSRSDEEVMALYESWLVEHGK 58

Query: 218 TYSEGSPEYTRRLGVFADNVRAIAEQNRR-NTGITLALNEYADETWEEFAAKRLGLKISQ 394
           +Y+    E  +R  +F DN+R I EQN R +    L LN +AD T EE+ +  LG K   
Sbjct: 59  SYNGLGGEKDKRFEIFKDNLRYIDEQNSRGDRSYKLGLNRFADLTNEEYRSTYLGAKTDA 118

Query: 395 EQLKAREARSSSSSSSSWRYAQV---QTPAAVDWRAKNAVTQVKNQGQCGSCWAFSAVGS 565
                   R  + + S  RYA       P ++DWR K AV +VK+QG CGSCWAFS + +
Sbjct: 119 R-------RRIAKTKSDRRYAPKAGGSLPDSIDWREKGAVAEVKDQGSCGSCWAFSTIAA 171

Query: 566 IEGANALATGQLVALSEQQLVDCDTASNMGCSGGLMDDAFKYVLDNGGIDTEEDYSYWSG 745
           +EG N + TG+L++LSEQ+LVDCDT+ N GC+GGLMD AF++++ NGGIDTE DY Y   
Sbjct: 172 VEGINQIVTGELISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTEADYPYTGR 231

Query: 746 YGFGFWCNKRKQTDRPAVSIDGYEDV-PTSEPAL 844
           YG    C++ ++  +  VSIDGYEDV P  E AL
Sbjct: 232 YG---RCDQTRKNAK-VVSIDGYEDVTPYDEAAL 261

>dbj|BAB63672.1| putative cysteine proteinase [Oryza sativa (japonica
           cultivar-group)]
          Length = 365

 Score =  187 bits (476), Expect = 1e-46
 Identities = 118/273 (43%), Positives = 155/273 (56%), Gaps = 19/273 (6%)
 Frame = +2

Query: 86  LALALAGLVGLSCAHALLSSADMLALAQVEPERA--------FGLWATQHARTYSEGSPE 241
           LAL L  L G +C  A+   +++  +   E + A        F  +  ++ + YS    E
Sbjct: 11  LALVLLLLCGGACV-AVAMPSELSIVGYSEEDLASHERLMELFEKFMAKYRKAYSS-LEE 68

Query: 242 YTRRLGVFADNVRAIAEQNRRNTGITLALNEYADETWEEFAAKRLGLKISQEQLKAREAR 421
             RR  VF DN+  I E+N++ TG  L LNE+AD T +EF A  LGL ++  +       
Sbjct: 69  KLRRFEVFKDNLNHIDEENKKITGYWLGLNEFADLTHDEFKAAYLGLTLTPAR------- 121

Query: 422 SSSSSSSSWRYAQVQT---PAAVDWRAKNAVTQVKNQGQCGSCWAFSAVGSIEGANALAT 592
             +S+   +RY +V+    P  VDWR K AVT+VKNQGQCGSCWAFS V ++EG NA+ T
Sbjct: 122 -RNSNDQLFRYEEVEAASLPKEVDWRKKGAVTEVKNQGQCGSCWAFSTVAAVEGINAIVT 180

Query: 593 GQLVALSEQQLVDCDTASNMGCSGGLMDDAFKYVLDNGGIDTEEDYSYWSGYGFGFWCNK 772
           G L  LSEQ+L+DCDT  N GCSGGLMD AF Y+  NGG+ TEE Y Y    G      +
Sbjct: 181 GNLTRLSEQELIDCDTDGNNGCSGGLMDYAFSYIAANGGLHTEESYPYLMEEG----TCR 236

Query: 773 RKQTD-------RPAVSIDGYEDVP-TSEPALL 847
           R  T+         AV+I GYEDVP  +E ALL
Sbjct: 237 RGSTEGDDDGEAAAAVTISGYEDVPRNNEQALL 269

>gb|AAL60578.1|AF454956_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 445

 Score =  187 bits (475), Expect = 2e-46
 Identities = 111/256 (43%), Positives = 147/256 (57%), Gaps = 1/256 (0%)
 Frame = +2

Query: 80  KFLALALAGLVGLSCAHALLSSADMLALAQVEPERAFGLWATQHARTYSEGSPEYTRRLG 259
           KF A+AL  L+ L  + +L            E  + F  W  ++ + Y+ G  E  +R  
Sbjct: 1   KFTAIALVTLLVLLASSSLSGVTAKADHRNPEEVKMFERWLVENHKNYN-GLGEKDKRFE 59

Query: 260 VFADNVRAIAEQNR-RNTGITLALNEYADETWEEFAAKRLGLKISQEQLKAREARSSSSS 436
           +F DN++ + E N   N    L L  +AD T EEF A  L  K+ +        R S  S
Sbjct: 60  IFMDNLKFVQEHNSVPNQSYELGLTRFADLTNEEFRAIYLRSKMER-------TRDSVKS 112

Query: 437 SSSWRYAQVQTPAAVDWRAKNAVTQVKNQGQCGSCWAFSAVGSIEGANALATGQLVALSE 616
                    + P  VDWRAK AV  VK+QG CGSCWAFSA+G++EG N + TG+LV+LSE
Sbjct: 113 ERYLHNVGDKLPDEVDWRAKGAVVPVKDQGSCGSCWAFSAIGAVEGINQIKTGELVSLSE 172

Query: 617 QQLVDCDTASNMGCSGGLMDDAFKYVLDNGGIDTEEDYSYWSGYGFGFWCNKRKQTDRPA 796
           Q+LVDCDT+ N GC GGLMD AF++++ NGGIDTEEDY Y +       CN  K+  R  
Sbjct: 173 QELVDCDTSYNNGCGGGLMDYAFQFIISNGGIDTEEDYPYTA--TDDNICNTDKKNTR-V 229

Query: 797 VSIDGYEDVPTSEPAL 844
           V+IDGYEDVP +E +L
Sbjct: 230 VTIDGYEDVPENENSL 245

>dbj|BAC75923.1| cysteine protease-1 [Helianthus annuus]
          Length = 461

 Score =  186 bits (473), Expect = 3e-46
 Identities = 101/247 (40%), Positives = 142/247 (56%)
 Frame = +2

Query: 107 LVGLSCAHALLSSADMLALAQVEPERAFGLWATQHARTYSEGSPEYTRRLGVFADNVRAI 286
           ++     H   SS+        E    +  W  +H +TY+    E  RR  +F DN+R I
Sbjct: 25  IINYDATHMSSSSSSAPLRTDDEVNALYESWLVKHGKTYN-ALGEKDRRFQIFKDNLRFI 83

Query: 287 AEQNRRNTGITLALNEYADETWEEFAAKRLGLKISQEQLKAREARSSSSSSSSWRYAQVQ 466
            E N  +    L LN++AD T EE+     G+K   ++ K  + +S   +  S       
Sbjct: 84  DEHNSGDHTYKLGLNKFADLTNEEYRMTYTGIKTIDDKKKLSKMKSDRYAYRSGD----S 139

Query: 467 TPAAVDWRAKNAVTQVKNQGQCGSCWAFSAVGSIEGANALATGQLVALSEQQLVDCDTAS 646
            P  VDWR + AVT VK+QG CGSCWAFS  GS+EG N + TG L+++SEQ+LV+CDT+ 
Sbjct: 140 LPEYVDWREQGAVTDVKDQGSCGSCWAFSTTGSVEGVNKIVTGDLISVSEQELVNCDTSY 199

Query: 647 NMGCSGGLMDDAFKYVLDNGGIDTEEDYSYWSGYGFGFWCNKRKQTDRPAVSIDGYEDVP 826
           N GC+GGLMD AF++++ NGGIDTEEDY Y    G    C+K K+  +  V+ID YEDVP
Sbjct: 200 NQGCNGGLMDYAFEFIIKNGGIDTEEDYPYTGKDG---KCDKNKKNAK-VVTIDSYEDVP 255

Query: 827 TSEPALL 847
            ++ + L
Sbjct: 256 VNDESSL 262

>pir||T12041 cysteine proteinase (EC 3.4.22.-) 3 precursor - kidney bean
           gi|2511693|emb|CAB17076.1| cysteine proteinase precursor
           [Phaseolus vulgaris]
          Length = 455

 Score =  184 bits (467), Expect = 2e-45
 Identities = 101/220 (45%), Positives = 135/220 (60%), Gaps = 3/220 (1%)
 Frame = +2

Query: 197 WATQHARTYSEGSPEYTRRLGVFADNVRAIAEQNRRNTGITLALNEYADETWEEFAAKRL 376
           W  +H + Y+    E  +R  +F DN+R I +QN  N    L LN +AD T EE+ A+ L
Sbjct: 43  WLVKHGKLYN-ALGEKDKRFQIFKDNLRFIDQQNAENRTYKLGLNRFADLTNEEYRARYL 101

Query: 377 GLKISQEQLKAREARSSSSSSSSWRYAQ---VQTPAAVDWRAKNAVTQVKNQGQCGSCWA 547
           G KI   +   R        + S RYA       P +VDWR + AV  VK+Q  CGSCWA
Sbjct: 102 GTKIDPNRRLGR--------TPSNRYAPRVGETLPDSVDWRKEGAVVPVKDQASCGSCWA 153

Query: 548 FSAVGSIEGANALATGQLVALSEQQLVDCDTASNMGCSGGLMDDAFKYVLDNGGIDTEED 727
           FSA+G++EG N + TG L++LSEQ+LVDCDT  NMGC+GGLMD AF++++ NGGID+EED
Sbjct: 154 FSAIGAVEGINKIVTGDLISLSEQELVDCDTGYNMGCNGGLMDYAFEFIIKNGGIDSEED 213

Query: 728 YSYWSGYGFGFWCNKRKQTDRPAVSIDGYEDVPTSEPALL 847
           Y Y    G    C++ ++  +  VSIDGYEDV T +   L
Sbjct: 214 YPY---KGVDGRCDEYRKNAK-VVSIDGYEDVNTYDELAL 249



EST assemble image


clone accession position
1 HC062a07_r AV636627 1 557
2 MX018a01_r BP086835 100 293
3 LCL090e04_r AV631223 102 460
4 HCL023f02_r AV640857 425 890
5 CM061e11_r AV390579 608 1079
6 LC100c10_r AV625956 646 956




Chlamydomonas reinhardtii
Kazusa DNA Research Institute