KCC001538A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001538A_C01 KCC001538A_c01
caGTTACCATATCAAAATGTCGCGCCCAGTAATCCACTACTTCCCTATTCGGGGCCGCGC
CGAGGTGTTGCGGCTGGCCATTGTTGCGGGTGGAGACGACTTTGACGTGGTGGACGTAAA
CTACCAAGAGCAGAAAAGCGATCGGGAGAAGTACCCGTTCGGACAGTGCCCCAGGCTTGT
GGATGGCGATTTGAACATCGTGCAGTCCAACACCATCGCCCGCTACCTTGCCCGCAAGTA
CAAGCTGCAGGGCAAGGATGAGACGGAGATGGTGGCTGTGGATGAGATCATGGAGGGCGT
GGAGTCCCTGCGTGTCAAATACGTCAACCTGATCTACAATGACAAGCTGGAGGAGGCCGC
CAAGGACTTGTACTGGAAGACCTACTTCGACAAGACCACCAGCGAGGGCCGCAACGGCGG
CGCGCACATGGTGTACCTAGCCAACTTTCTGGCCAAGAACGGCGGCAAGCACACGGTGGG
CGCCGGTCTGACCATCGCCGACCTGTGCCTGTGGGAGATCCTGGACCTGAACTGCGCATT
TCGAGGACGCCCTCAGAGGGTACCCGAGCTGTTGTGTCCCC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001538A_C01 KCC001538A_c01
         (581 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pdb|22GS|A Chain A, Human Glutathione S-Transferase P1-1 Y49f Mu...    93  2e-18
pdb|2PGT|A Chain A, Crystal Structure Of Human Glutathione S-Tra...    92  4e-18
pdb|4PGT|A Chain A, Crystal Structure Of Hgstp1-1[v104] Complexe...    92  4e-18
pdb|1MD3|A Chain A, A Folding Mutant Of Human Class Pi Glutathio...    92  5e-18
pdb|1EOH|A Chain A, Glutathione Transferase P1-1 gi|11514452|pdb...    92  5e-18

>pdb|22GS|A Chain A, Human Glutathione S-Transferase P1-1 Y49f Mutant
           gi|4699784|pdb|22GS|B Chain B, Human Glutathione
           S-Transferase P1-1 Y49f Mutant
          Length = 210

 Score = 93.2 bits (230), Expect = 2e-18
 Identities = 56/140 (40%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
 Frame = +2

Query: 38  YFPIRGRAEVLRLAIVAGGDDF--DVVDVNYQEQKSDREKYPFGQCPRLVDGDLNIVQSN 211
           YFP+RGR   LR+ +   G  +  +VV V   ++ S +    FGQ P+  DGDL + QSN
Sbjct: 8   YFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLFGQLPKFQDGDLTLYQSN 67

Query: 212 TIARYLARKYKLQGKDETEMVAVDEIMEGVESLRVKYVNLIYNDKLEEAAKDLYWKTY-- 385
           TI R+L R   L GKD+ E   VD + +GVE LR KY++LIY +   EA KD Y K    
Sbjct: 68  TILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTN--YEAGKDDYVKALPG 125

Query: 386 ----FDKTTSEGRNGGAHMV 433
               F+   S+ + G   +V
Sbjct: 126 QLKPFETLLSQNQGGKTFIV 145

>pdb|2PGT|A Chain A, Crystal Structure Of Human Glutathione S-Transferase
           P1-1[v104] Complexed With
           (9r,10r)-9-(S-Glutathionyl)-10-
           Hydroxy-9,10-Dihydrophenanthrene gi|2554832|pdb|2PGT|B
           Chain B, Crystal Structure Of Human Glutathione
           S-Transferase P1-1[v104] Complexed With
           (9r,10r)-9-(S-Glutathionyl)-10-
           Hydroxy-9,10-Dihydrophenanthrene gi|2554839|pdb|1PGT|A
           Chain A, Crystal Structure Of Human Glutathione
           S-Transferase P1-1[v104] Complexed With
           S-Hexylglutathione gi|2554840|pdb|1PGT|B Chain B,
           Crystal Structure Of Human Glutathione S-Transferase
           P1-1[v104] Complexed With S-Hexylglutathione
           gi|2076717|gb|AAC51280.1| glutathione S-transferase
           gi|15012036|gb|AAH10915.1| Glutathione transferase [Homo
           sapiens]
          Length = 210

 Score = 92.4 bits (228), Expect = 4e-18
 Identities = 56/140 (40%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
 Frame = +2

Query: 38  YFPIRGRAEVLRLAIVAGGDDF--DVVDVNYQEQKSDREKYPFGQCPRLVDGDLNIVQSN 211
           YFP+RGR   LR+ +   G  +  +VV V   ++ S +    +GQ P+  DGDL + QSN
Sbjct: 8   YFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSN 67

Query: 212 TIARYLARKYKLQGKDETEMVAVDEIMEGVESLRVKYVNLIYNDKLEEAAKDLYWKTY-- 385
           TI R+L R   L GKD+ E   VD + +GVE LR KYV+LIY +   EA KD Y K    
Sbjct: 68  TILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYVSLIYTN--YEAGKDDYVKALPG 125

Query: 386 ----FDKTTSEGRNGGAHMV 433
               F+   S+ + G   +V
Sbjct: 126 QLKPFETLLSQNQGGKTFIV 145

>pdb|4PGT|A Chain A, Crystal Structure Of Hgstp1-1[v104] Complexed With The Gsh
           Conjugate Of (+)-Anti-Bpde gi|5822570|pdb|4PGT|B Chain
           B, Crystal Structure Of Hgstp1-1[v104] Complexed With
           The Gsh Conjugate Of (+)-Anti-Bpde
          Length = 210

 Score = 92.4 bits (228), Expect = 4e-18
 Identities = 56/140 (40%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
 Frame = +2

Query: 38  YFPIRGRAEVLRLAIVAGGDDF--DVVDVNYQEQKSDREKYPFGQCPRLVDGDLNIVQSN 211
           YFP+RGR   LR+ +   G  +  +VV V   ++ S +    +GQ P+  DGDL + QSN
Sbjct: 8   YFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSN 67

Query: 212 TIARYLARKYKLQGKDETEMVAVDEIMEGVESLRVKYVNLIYNDKLEEAAKDLYWKTY-- 385
           TI R+L R   L GKD+ E   VD + +GVE LR KYV+LIY +   EA KD Y K    
Sbjct: 68  TILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRXKYVSLIYTN--YEAGKDDYVKALPG 125

Query: 386 ----FDKTTSEGRNGGAHMV 433
               F+   S+ + G   +V
Sbjct: 126 QLKPFETLLSQNQGGKTFIV 145

>pdb|1MD3|A Chain A, A Folding Mutant Of Human Class Pi Glutathione
           Transferase, Created By Mutating Glycine 146 Of The
           Wild-Type Protein To Alanine gi|23200509|pdb|1MD3|B
           Chain B, A Folding Mutant Of Human Class Pi Glutathione
           Transferase, Created By Mutating Glycine 146 Of The
           Wild-Type Protein To Alanine
          Length = 209

 Score = 92.0 bits (227), Expect = 5e-18
 Identities = 55/140 (39%), Positives = 77/140 (54%), Gaps = 8/140 (5%)
 Frame = +2

Query: 38  YFPIRGRAEVLRLAIVAGGDDF--DVVDVNYQEQKSDREKYPFGQCPRLVDGDLNIVQSN 211
           YFP+RGR   LR+ +   G  +  +VV V   ++ S +    +GQ P+  DGDL + QSN
Sbjct: 7   YFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSN 66

Query: 212 TIARYLARKYKLQGKDETEMVAVDEIMEGVESLRVKYVNLIYNDKLEEAAKDLYWKTY-- 385
           TI R+L R   L GKD+ E   VD + +GVE LR KY++LIY +   EA KD Y K    
Sbjct: 67  TILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTN--YEAGKDDYVKALPG 124

Query: 386 ----FDKTTSEGRNGGAHMV 433
               F+   S+ + G   +V
Sbjct: 125 QLKPFETLLSQNQGGKTFIV 144

>pdb|1EOH|A Chain A, Glutathione Transferase P1-1 gi|11514452|pdb|1EOH|B Chain
           B, Glutathione Transferase P1-1 gi|11514453|pdb|1EOH|C
           Chain C, Glutathione Transferase P1-1
           gi|11514454|pdb|1EOH|D Chain D, Glutathione Transferase
           P1-1 gi|11514455|pdb|1EOH|E Chain E, Glutathione
           Transferase P1-1 gi|11514456|pdb|1EOH|F Chain F,
           Glutathione Transferase P1-1 gi|11514457|pdb|1EOH|G
           Chain G, Glutathione Transferase P1-1
           gi|11514458|pdb|1EOH|H Chain H, Glutathione Transferase
           P1-1
          Length = 209

 Score = 92.0 bits (227), Expect = 5e-18
 Identities = 55/140 (39%), Positives = 77/140 (54%), Gaps = 8/140 (5%)
 Frame = +2

Query: 38  YFPIRGRAEVLRLAIVAGGDDF--DVVDVNYQEQKSDREKYPFGQCPRLVDGDLNIVQSN 211
           YFP+RGR   LR+ +   G  +  +VV V   ++ S +    +GQ P+  DGDL + QSN
Sbjct: 7   YFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSN 66

Query: 212 TIARYLARKYKLQGKDETEMVAVDEIMEGVESLRVKYVNLIYNDKLEEAAKDLYWKTY-- 385
           TI R+L R   L GKD+ E   VD + +GVE LR KY++LIY +   EA KD Y K    
Sbjct: 67  TILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTN--YEAGKDDYVKALPG 124

Query: 386 ----FDKTTSEGRNGGAHMV 433
               F+   S+ + G   +V
Sbjct: 125 QLKPFETLLSQNQGGKTFIV 144



EST assemble image


clone accession position
1 CM060d09_r AV390744 1 500
2 LC022f09_r AV620477 3 514
3 LC027h06_r AV620867 5 516
4 LC097d11_r AV625757 6 475
5 LC017e12_r AV620101 7 521
6 CM078a02_r AV391799 14 589




Chlamydomonas reinhardtii
Kazusa DNA Research Institute