KCC001533A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001533A_C01 KCC001533A_c01
ccacgacggacgcgctcgacctgctgcgccgcgtctttcagctgaagcggtttgtcggtg
gAAACAGCAACAGCATGGGCGAGGGCGGCAGCTCGGAGGAGCCCGCCGAGAGCCCGGAGG
AGGAGCTAGTGCAGGCAGGCTGCACAGCCGTTGTCGCGGTCAAGTTCGGCAACGAGCTTT
TTGTGGCGAACGCTGGCGACAGCCGCGGCGTGCTCTGCCGGGCTGGCAAGGCCGTGGCTC
TCAGCGAGGACCATAAGCCTGCTCAGGAGGGCGAGCGCTCGCGCATCATAGCTGCCGGCG
GCTTTCTCTCGGAGATCGGCGGTGTTTGTCGCGTTAATGGCAACCTCAACCTCAGCCGCG
CCATCGGTGACCTCAAGTATAAAACCAACAACGAGCTGCCGCCCTCGGACCAGATTATCA
CAGCTCAGCCAGACATCCGCAAAATCGCGCTCAGCCCAGAGGACCGCTTCTTCCTTCTGG
CCTGCGACGGCGTCTGGGACGTCATGTCCAACCAGGACGCGGTGGATTTCGTGTCTGCGC
GGCTAGACCAGGTCATGACGCCCAGTCACGCCTCGTGCGCGCTGCTGGACGCCTGCCTGT
GCAGCGATCCCAAGGAGGCTCGCGGGGTCGGGTGCGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001533A_C01 KCC001533A_c01
         (637 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_316230.1| ENSANGP00000017684 [Anopheles gambiae] gi|30175...   160  1e-38
ref|NP_610169.1| CG10417-PA [Drosophila melanogaster] gi|2458583...   160  2e-38
ref|NP_741087.1| protein phosphatase type-2C (51.0 kD) (3B403) [...   155  5e-37
ref|NP_741086.1| protein phosphatase type-2C, possibly N-myristo...   155  5e-37
gb|AAH41734.1| Similar to protein phosphatase 1G (formerly 2C), ...   154  1e-36

>ref|XP_316230.1| ENSANGP00000017684 [Anopheles gambiae] gi|30175959|gb|EAA11252.2|
            ENSANGP00000017684 [Anopheles gambiae str. PEST]
          Length = 778

 Score =  160 bits (405), Expect = 1e-38
 Identities = 96/215 (44%), Positives = 124/215 (57%), Gaps = 23/215 (10%)
 Frame = +3

Query: 60   GNSNSMGEGGSSEEPAESPEE-----ELVQ-----------------AGCTAVVAVKFGN 173
            G  ++ GE GS+EE  E P+E     E +                  +GCTAVVA+  G 
Sbjct: 458  GEEDAYGEEGSAEEEEEEPDEYADMGEYINEEDAAFMKTITDEPGKDSGCTAVVALLHGK 517

Query: 174  ELFVANAGDSRGVLCRAGKAVALSEDHKPAQEGERSRIIAAGGFLSEIGGVCRVNGNLNL 353
            +L+VANAGDSR V+CR GKA+ +S DHKP    E  RI  AGG ++  G   RVNG LNL
Sbjct: 518  DLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGRVTLDG---RVNGGLNL 574

Query: 354  SRAIGDLKYKTNNELPPSDQIITAQPDIRKIALSPEDRFFLLACDGVWDVMSNQDAVDFV 533
            SRAIGD  YK N  LP  +Q+I+A PDI KI + PED F +LACDG+W+ M+++  V FV
Sbjct: 575  SRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFV 634

Query: 534  SARLDQV-MTPSHASCALLDACLCSDPKEARGVGC 635
              R+++  M  S     L D CL    +   G GC
Sbjct: 635  QERINKPGMKLSKICEELFDHCLAPHTR-GDGTGC 668

>ref|NP_610169.1| CG10417-PA [Drosophila melanogaster] gi|24585838|ref|NP_724410.1|
           CG10417-PB [Drosophila melanogaster]
           gi|7302240|gb|AAF57333.1| CG10417-PA [Drosophila
           melanogaster] gi|15291807|gb|AAK93172.1| LD27655p
           [Drosophila melanogaster] gi|21626866|gb|AAM68379.1|
           CG10417-PB [Drosophila melanogaster]
          Length = 662

 Score =  160 bits (404), Expect = 2e-38
 Identities = 86/173 (49%), Positives = 114/173 (65%)
 Frame = +3

Query: 117 EEELVQAGCTAVVAVKFGNELFVANAGDSRGVLCRAGKAVALSEDHKPAQEGERSRIIAA 296
           EE    +GCTAVV +  G +L+VANAGDSR V+ R+G+A+ +S DHKP  + E SRII A
Sbjct: 386 EEPGKDSGCTAVVCLLQGRDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKA 445

Query: 297 GGFLSEIGGVCRVNGNLNLSRAIGDLKYKTNNELPPSDQIITAQPDIRKIALSPEDRFFL 476
           GG ++  G   RVNG LNLSRA+GD  YKTN  LP  +Q+I+A PDI+K+ ++PED F +
Sbjct: 446 GGRVTLDG---RVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEFMV 502

Query: 477 LACDGVWDVMSNQDAVDFVSARLDQVMTPSHASCALLDACLCSDPKEARGVGC 635
           LACDG+W+ MS+++ V+FV  RL      S     L D CL  +     G GC
Sbjct: 503 LACDGIWNYMSSEEVVEFVRCRLKDNKKLSTICEELFDNCLAPNTM-GDGTGC 554

>ref|NP_741087.1| protein phosphatase type-2C (51.0 kD) (3B403) [Caenorhabditis
           elegans] gi|20901970|gb|AAM29692.1|U00051_2 Hypothetical
           protein F42G9.1b [Caenorhabditis elegans]
          Length = 469

 Score =  155 bits (392), Expect = 5e-37
 Identities = 92/187 (49%), Positives = 117/187 (62%)
 Frame = +3

Query: 75  MGEGGSSEEPAESPEEELVQAGCTAVVAVKFGNELFVANAGDSRGVLCRAGKAVALSEDH 254
           +G GG     AE P E+   +G TA V +   +++ VANAGDSR VLCR GKAV LS DH
Sbjct: 281 LGSGG-----AEVPGED---SGTTACVCLVGKDKVIVANAGDSRAVLCRNGKAVDLSVDH 332

Query: 255 KPAQEGERSRIIAAGGFLSEIGGVCRVNGNLNLSRAIGDLKYKTNNELPPSDQIITAQPD 434
           KP  E E +RI AAGG + +     RVNG LNLSRA GD  YK N EL   +Q+ITA PD
Sbjct: 333 KPEDEVETNRIHAAGGQIED----GRVNGGLNLSRAFGDHAYKKNQELGLKEQMITALPD 388

Query: 435 IRKIALSPEDRFFLLACDGVWDVMSNQDAVDFVSARLDQVMTPSHASCALLDACLCSDPK 614
           ++  AL+PED F ++ACDG+W+ M +Q  VDFV   L +  + +    AL DACL +D  
Sbjct: 389 VKIEALTPEDEFIVVACDGIWNSMESQQVVDFVRDLLAKGSSCAEVCDALCDACL-ADST 447

Query: 615 EARGVGC 635
           +  G GC
Sbjct: 448 DGDGTGC 454

>ref|NP_741086.1| protein phosphatase type-2C, possibly N-myristoylated (53.1 kD)
           (3B403) [Caenorhabditis elegans]
           gi|1709517|sp|P49595|P2C1_CAEEL PROBABLE PROTEIN
           PHOSPHATASE 2C F42G9.1 (PP2C) gi|7503282|pir||T16354
           hypothetical protein F42G9.1 - Caenorhabditis elegans
           gi|1216310|gb|AAA91358.1| Hypothetical protein F42G9.1a
           [Caenorhabditis elegans]
          Length = 491

 Score =  155 bits (392), Expect = 5e-37
 Identities = 92/187 (49%), Positives = 117/187 (62%)
 Frame = +3

Query: 75  MGEGGSSEEPAESPEEELVQAGCTAVVAVKFGNELFVANAGDSRGVLCRAGKAVALSEDH 254
           +G GG     AE P E+   +G TA V +   +++ VANAGDSR VLCR GKAV LS DH
Sbjct: 303 LGSGG-----AEVPGED---SGTTACVCLVGKDKVIVANAGDSRAVLCRNGKAVDLSVDH 354

Query: 255 KPAQEGERSRIIAAGGFLSEIGGVCRVNGNLNLSRAIGDLKYKTNNELPPSDQIITAQPD 434
           KP  E E +RI AAGG + +     RVNG LNLSRA GD  YK N EL   +Q+ITA PD
Sbjct: 355 KPEDEVETNRIHAAGGQIED----GRVNGGLNLSRAFGDHAYKKNQELGLKEQMITALPD 410

Query: 435 IRKIALSPEDRFFLLACDGVWDVMSNQDAVDFVSARLDQVMTPSHASCALLDACLCSDPK 614
           ++  AL+PED F ++ACDG+W+ M +Q  VDFV   L +  + +    AL DACL +D  
Sbjct: 411 VKIEALTPEDEFIVVACDGIWNSMESQQVVDFVRDLLAKGSSCAEVCDALCDACL-ADST 469

Query: 615 EARGVGC 635
           +  G GC
Sbjct: 470 DGDGTGC 476

>gb|AAH41734.1| Similar to protein phosphatase 1G (formerly 2C),
           magnesium-dependent, gamma isoform [Xenopus laevis]
          Length = 544

 Score =  154 bits (388), Expect = 1e-36
 Identities = 93/182 (51%), Positives = 114/182 (62%), Gaps = 6/182 (3%)
 Frame = +3

Query: 108 ESPEEELVQAGCTAVVAVKFGNELFVANAGDSRGVLCRAGKAVALSEDHKPAQEGERSRI 287
           E  EE    +G TAVVA+  G +L VANAGDSR V+   GKAV +S DHKP  E E SRI
Sbjct: 321 EGKEEPGSDSGTTAVVALIRGQQLIVANAGDSRCVVSEGGKAVDMSYDHKPEDELELSRI 380

Query: 288 IAAGGFLSEIGGVCRVNGNLNLSRAIGDLKYKTNNELPPSDQIITAQPDIRKIALSPEDR 467
             AGG ++  G   RVNG LNLSRAIGD  YK N  LPP +Q+I+A PDI+ + LS E  
Sbjct: 381 KNAGGKVTMDG---RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLSEEHE 437

Query: 468 FFLLACDGVWDVMSNQDAVDFVSARLDQVM----TPSHASCA--LLDACLCSDPKEARGV 629
           F ++ACDG+W+VMS+Q+ VDFV  R +  +    T S +S    LLD CL  D     G 
Sbjct: 438 FMVIACDGIWNVMSSQEVVDFVHERRESQLQKGDTLSLSSIVEELLDQCLAPD-TSGDGT 496

Query: 630 GC 635
           GC
Sbjct: 497 GC 498



EST assemble image


clone accession position
1 MXL018d03_r BP094115 1 310
2 CM060a03_r AV390770 54 637




Chlamydomonas reinhardtii
Kazusa DNA Research Institute