KCC001524A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001524A_C01 KCC001524A_c01
gctgagtacgagggcgtgtccgccgacggcctggagggcgccaacggcaactacgcccct
ggagcgccactcGCAGCGGCCTGATCAAGGGCAAGAACGGCTACCAGGTGGCCCCCATGG
GCCTGCCCAGCCGCCCCCTGAACGACGCCGTGACCTCGTCGGGCCTGGCCATCCTGGGCA
CCTCGGAGGTTGACTTCGATGGCGATGAGGTGCAGCTGGTGGACTACTGGACCAGCGAGG
CCTTCGACAACATCCCCAAGGATGTGCTGAAGAAGCTGGGCCTGAAGATGTCCTACACCG
AGGCCGGCGAGGCCGAGTTCGAGGAGCGCGCTGACTTCGAGGCTACCGACGTGCCCTTCT
ACCTGTACGGTGGCGACGTGGAGTCGCGCGCCAAGGAGTTCGTGGCGGACCTGCTGTCGG
ATGACGTGGACGAGGCTGAGCTGCCCGCCCGCGCCGGCCGCGCCCCCATTGTGCTGGCCG
CCGCTGTGCAAAGTCAGTAACTTGCGCGGCCGGCTCCGGCCCGTGCTATGTGGGCGGATG
GGAATCTGCCTATGAGCAGCGGGCTGAAATGGGCGTGGAGTGGGCAGGGGTTGGAGTGCG
GGAAAAAGAATTAGGTGAAACATGCGGCCGGGCAGCGCTGGTCCAGAAGGGCTGGGCGCG
TGCGTGGCATGGCGTGCGTGGCGGCTGCCTTGGAAGCACCACGGCATGCAGTTAGGGGAC
GATTGGGTTGCTGGGCGTGCGCTCACGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001524A_C01 KCC001524A_c01
         (748 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAH58068.1| Unknown (protein for MGC:63802) [Danio rerio]           58  1e-07
pir||T43481 probable mucin DKFZp434C196.1 - human (fragment) gi|...    57  2e-07
ref|XP_317879.1| ENSANGP00000004917 [Anopheles gambiae] gi|21300...    55  4e-07
ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]         56  5e-07
ref|ZP_00057775.1| COG1205: Distinct helicase family with a uniq...    56  7e-07

>gb|AAH58068.1| Unknown (protein for MGC:63802) [Danio rerio]
          Length = 896

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 64/232 (27%), Positives = 94/232 (39%), Gaps = 27/232 (11%)
 Frame = -2

Query: 747 RERTPSNPIVP*LHAVVLPRQPPRTPCHARAQPFWTSAARPHVSPNSFSRTPTPAHSTPI 568
           R R+P   I P   A   P  PP      + +P  + +++P       S T     S  +
Sbjct: 184 RSRSPRRKISP---AASPPSSPPNHKEEPKREPDQSESSKPEPLIQEASST-----SDLV 235

Query: 567 SARCS*ADSHPPT*HGPEPAAQVTDFAQRRPAQWGRGRRGRAAQPRPRHPTAGP-----P 403
           +     + S P     P+  ++  D    RP    R + GR  +PR R  +  P     P
Sbjct: 236 TEMKPDSVSEPVKESSPDKTSKSED----RPKPRDREKDGRKDRPRHRSRSRSPRSRRRP 291

Query: 402 RTPWRATPRRHRTGRRARR*PRSQRAPRTRP-------------RRPRCRTSSGPASSAH 262
           R+  R+   R RT  R R  PR +  PR +P             RRPR R+SSG +SS  
Sbjct: 292 RSRSRSFSPRRRTSPRRRISPRRRSPPRRQPPSRHRRSRSPVRRRRPRSRSSSGSSSSRS 351

Query: 261 PWGCCRRPRWSSSPP---------AAPHRHRSQPPRCPGWPGPTRSRRRSGG 133
           P     + R S++PP         ++P R R + P  P    P+  + R GG
Sbjct: 352 PHKRAGK-RGSATPPRKLARRTDLSSPPRRRGRSPSGPD-TSPSAVKHRPGG 401

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 65/234 (27%), Positives = 86/234 (35%), Gaps = 14/234 (5%)
 Frame = -2

Query: 747  RERTPSNPIVP*LHAVVLPRQPPRTPCHA-RAQPFWTSAARPHVSPNSFSRTPTPAHSTP 571
            R  +P++P      A    R+ P  P    R+Q        P   P   S +P P   TP
Sbjct: 480  RSHSPASPRRRHRDASPRKRRSPSPPGRRHRSQSPVRRRRSPSPPPRRRSPSPPPRRFTP 539

Query: 570  -ISARCS*ADSHPPT*HGPEPAAQVTDFAQRRPAQWGRGRRGRAAQPRPRHPTAGPPRTP 394
             I  R S     PP+   P PA +     +R      + RR  +  P+ R P + PP+  
Sbjct: 540  PIQRRYS-----PPS---PSPAQK-----RRSSGSPPKRRRSPSPMPKRRIPPSPPPKRR 586

Query: 393  WRATPRRHRTGRRARR*PRSQRAPRTRPRRPRCRTSSGPAS----SAHPWG---CCRRP- 238
               +P   R     R+ P      RT P   + RTS  P +    S  P      C  P 
Sbjct: 587  MSPSPPPKR-----RKSPSPMSKRRTSPSVSKRRTSPSPVAKHRRSPSPMSKRRTCASPV 641

Query: 237  -RWSSSPPAAPHRHRSQP---PRCPGWPGPTRSRRRSGGGWAGPWGPPGSRSCP 88
             +  +SP  AP R RS P   P+  G P P   R  S          PG R  P
Sbjct: 642  SKRRNSPSPAPQR-RSSPSPMPKHRGSPSPVTKRHTSRSPKRSRGTSPGKRRTP 694

 Score = 43.1 bits (100), Expect = 0.005
 Identities = 57/194 (29%), Positives = 72/194 (36%), Gaps = 10/194 (5%)
 Frame = -2

Query: 690  RQPPRTPCHARAQPFWTSAAR--PHVSPNSFSRTPTPAHS---TPISARCS*ADSHPPT* 526
            R  P  P   R  P   S  R  P VS    S +P   H    +P+S R + A       
Sbjct: 586  RMSPSPPPKRRKSPSPMSKRRTSPSVSKRRTSPSPVAKHRRSPSPMSKRRTCASPVSKRR 645

Query: 525  HGPEPAAQVTDFAQRRPAQWGRGRRGRAAQPRPRHPTAGPPRTPWRAT--PRRHR-TGRR 355
            + P PA Q                R  +  P P+H  +  P T    +  P+R R T   
Sbjct: 646  NSPSPAPQ----------------RRSSPSPMPKHRGSPSPVTKRHTSRSPKRSRGTSPG 689

Query: 354  ARR*PRSQRAPRTRPRRPRCRTSSGPASSAHPWGCCRRPRWSSSPPAAPHRHRSQPPRCP 175
             RR P S  +P  R RR          +S +P    R     SSPPA   R  S PP   
Sbjct: 690  KRRTPPSSASPPPRHRR----------NSPNPPAAQRGRDTRSSPPAHTTRVSSSPPGRY 739

Query: 174  GWPG--PTRSRRRS 139
            G  G  P R RR++
Sbjct: 740  GASGSSPQRQRRQT 753

 Score = 41.2 bits (95), Expect = 0.017
 Identities = 40/128 (31%), Positives = 45/128 (34%), Gaps = 2/128 (1%)
 Frame = -2

Query: 465 GRGRRGRAAQPRPRHPTAGPPRTPWRATPRRHRTGRRARR*PRSQRAPRTR--PRRPRCR 292
           G G R    + R  H  A P R    A+PR+ R+     R  RSQ   R R  P  P  R
Sbjct: 468 GAGARNGEIRRRRSHSPASPRRRHRDASPRKRRSPSPPGRRHRSQSPVRRRRSPSPPPRR 527

Query: 291 TSSGPASSAHPWGCCRRPRWSSSPPAAPHRHRSQPPRCPGWPGPTRSRRRSGGGWAGPWG 112
            S  P          RR    S  PA   R    PP+    P P   RR        P  
Sbjct: 528 RSPSPPPRRFTPPIQRRYSPPSPSPAQKRRSSGSPPKRRRSPSPMPKRR------IPPSP 581

Query: 111 PPGSRSCP 88
           PP  R  P
Sbjct: 582 PPKRRMSP 589

 Score = 39.3 bits (90), Expect = 0.066
 Identities = 42/130 (32%), Positives = 52/130 (39%), Gaps = 13/130 (10%)
 Frame = -2

Query: 489 AQRRPAQWGRGRRGRAAQPRPRHPTAGPPRTPWRATP-RRHRTG-----RRARR*PRSQR 328
           A  R  +  R R    A PR RH  A P +    + P RRHR+      RR+   P  +R
Sbjct: 469 AGARNGEIRRRRSHSPASPRRRHRDASPRKRRSPSPPGRRHRSQSPVRRRRSPSPPPRRR 528

Query: 327 APRTRPRR---PRCRT----SSGPASSAHPWGCCRRPRWSSSPPAAPHRHRSQPPRCPGW 169
           +P   PRR   P  R     S  PA      G   + R S SP        S PP+    
Sbjct: 529 SPSPPPRRFTPPIQRRYSPPSPSPAQKRRSSGSPPKRRRSPSPMPKRRIPPSPPPKRRMS 588

Query: 168 PGPTRSRRRS 139
           P P   RR+S
Sbjct: 589 PSPPPKRRKS 598

>pir||T43481 probable mucin DKFZp434C196.1 - human (fragment)
           gi|6599134|emb|CAB63715.1| hypothetical protein [Homo
           sapiens]
          Length = 580

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 70/230 (30%), Positives = 84/230 (36%), Gaps = 30/230 (13%)
 Frame = -2

Query: 693 PRQPPRTPCHA-------RAQPFWTS-AARPHVSPNSFSRTPTPAHSTPISARCS*ADSH 538
           PR  PRTP  A       RA P  +   A P  +P   S T TP+ ++P         S 
Sbjct: 92  PRASPRTPSRASPTRRLPRASPMGSPHRASPMRTPPRASPTGTPSTASPTGT----PSSA 147

Query: 537 PPT*HGPEPAAQVTD-----FAQRRPAQWGRGRRGRAAQPRPRHPTAGPPRTPWRATPRR 373
            PT  G  P A  T      +A R P+     R    A      P A P RTP R +PR 
Sbjct: 148 SPT--GTPPRASPTGTPPRAWATRSPSTASLTRTPSRASLTRWPPRASPTRTPPRESPRM 205

Query: 372 HRTGRRARR*PR---SQRAPRTRPRRPRCRTSSGPASSAHPW------GCCRRPRWSS-- 226
                  R  PR   ++R PR  P R   R S   +  A P          RRP  +S  
Sbjct: 206 SHRASPTRTPPRASPTRRPPRASPTRTPPRESLRTSHRASPTRMPPRASPTRRPPRASPT 265

Query: 225 -SPPAA-----PHRHRSQPPRCPGWPGPTRSRRRSGGGWAGPWGPPGSRS 94
            SPP A     P      PPR      P+R+       WA P   P   S
Sbjct: 266 GSPPRASPMTPPRASPRTPPRASPTTTPSRASLTRTPSWASPTTTPSRAS 315

 Score = 37.4 bits (85), Expect = 0.25
 Identities = 51/191 (26%), Positives = 65/191 (33%), Gaps = 5/191 (2%)
 Frame = -2

Query: 696 LPRQPPRTPCHARAQPFWTSAARPHVSPNSFSRTPTPAHSTPISARCS*ADSHPPT*HGP 517
           L R PPR     R      +      SP   +R P+ A       R S            
Sbjct: 7   LTRTPPRASLMRRPSTASLTRTPSRASP---TRMPSRASLKMTPFRASLTKMESTALLRT 63

Query: 516 EPAAQVTDFAQRRPAQWGRGRRGRAAQPRPRHPTAGPPRTPWRATPRRHRTGRRARR*PR 337
            P A +     R P +    R    A P  + P A P RTP RA+P R          P 
Sbjct: 64  LPRASL----MRTPTRASLMRTPPRASPTRKPPRASP-RTPSRASPTRRLPRASPMGSPH 118

Query: 336 SQRAPRTRPR-----RPRCRTSSGPASSAHPWGCCRRPRWSSSPPAAPHRHRSQPPRCPG 172
                RT PR      P   + +G  SSA P G   R   + +PP      R+   R P 
Sbjct: 119 RASPMRTPPRASPTGTPSTASPTGTPSSASPTGTPPRASPTGTPP------RAWATRSPS 172

Query: 171 WPGPTRSRRRS 139
               TR+  R+
Sbjct: 173 TASLTRTPSRA 183

 Score = 32.7 bits (73), Expect = 6.2
 Identities = 34/104 (32%), Positives = 41/104 (38%)
 Frame = -2

Query: 405 PRTPWRATPRRHRTGRRARR*PRSQRAPRTRPRRPRCRTSSGPASSAHPWGCCRRPRWSS 226
           PR     TP R    R   R   +++ PR  PR P         S A P    R PR  +
Sbjct: 65  PRASLMRTPTRASLMRTPPRASPTRKPPRASPRTP---------SRASP--TRRLPR--A 111

Query: 225 SPPAAPHRHRSQPPRCPGWPGPTRSRRRSGGGWAGPWGPPGSRS 94
           SP  +P  HR+ P R P    PT +        A P G P S S
Sbjct: 112 SPMGSP--HRASPMRTPPRASPTGT-----PSTASPTGTPSSAS 148

>ref|XP_317879.1| ENSANGP00000004917 [Anopheles gambiae] gi|21300834|gb|EAA12979.1|
           ENSANGP00000004917 [Anopheles gambiae str. PEST]
          Length = 257

 Score = 55.1 bits (131), Expect(2) = 4e-07
 Identities = 52/153 (33%), Positives = 58/153 (36%), Gaps = 14/153 (9%)
 Frame = -2

Query: 477 PAQWGRGR-RGRAAQPRPRHPTAGPPRTPWRATPRRHRTGRRARR*PRSQRAPRTRPRRP 301
           PA W   R R    +P P    +GP RTP R    R     R RR   S       P R 
Sbjct: 9   PAAWPPRRPRSSTDRPTPPRTASGPSRTPARPPRTRPSAPGRIRRAAASPPPFPPAPARR 68

Query: 300 RCRTSSGPASSAHPWGCC------RRPRWSSSPP-------AAPHRHRSQPPRCPGWPGP 160
           R   S   ++SA P  CC      RRPR   SPP       AAP R   +PPRC   P  
Sbjct: 69  RGCFSGDFSASAAPARCCPSSCCARRPR---SPPFCFPPPAAAPARRAHRPPRCRCAPAA 125

Query: 159 TRSRRRSGGGWAGPWGPPGSRSCP*SGRCEWRS 61
                R+ G W        S   P S    WRS
Sbjct: 126 PSPPARAFGPWRS--STRSSARSPQSPTAGWRS 156

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 63/216 (29%), Positives = 76/216 (35%), Gaps = 31/216 (14%)
 Frame = -2

Query: 693 PRQPPRTPCHARAQPFWTSAARPHVSP----------NSFSRTPTPAHSTPISARCS*AD 544
           P +PPRT   A  +    +A+ P   P            FS +  PA   P S  C+   
Sbjct: 37  PARPPRTRPSAPGRIRRAAASPPPFPPAPARRRGCFSGDFSASAAPARCCPSSC-CARRP 95

Query: 543 SHPPT*HGPEPAAQVTDFAQRRP----------------AQWGRGRRGRAAQPRPRHPTA 412
             PP    P PAA     A R P                  W    R  A  P+   PTA
Sbjct: 96  RSPPFCF-PPPAAAPARRAHRPPRCRCAPAAPSPPARAFGPWRSSTRSSARSPQS--PTA 152

Query: 411 GPPRTPWRA---TPRRHRTGRRARR*PRSQRAPRTRPRRPRCR-TSSGPASSAHPWGCCR 244
           G     WR+   TPRR  T              RT     RCR T SG   SA P  C  
Sbjct: 153 G-----WRSFAPTPRRPCTAA-------DSGTRRTAASGTRCRGTPSGTRCSA-PAPCAA 199

Query: 243 RPRWSSSPPAAPHRHRS-QPPRCPGWPGPTRSRRRS 139
            P  + SPP +P   RS   P       P+R+  R+
Sbjct: 200 SPASARSPPVSPRTARSASRPSSRSASAPSRASPRT 235

 Score = 32.7 bits (73), Expect = 6.2
 Identities = 37/135 (27%), Positives = 43/135 (31%), Gaps = 12/135 (8%)
 Frame = +1

Query: 163 AWPSWAPRRLTSMAM---RCSWWTTGPARPSTTSPRMC*R-SWA*RCPTPRPARPSSR-- 324
           AWP   PR  T         S  +  PARP  T P    R   A   P P P  P+ R  
Sbjct: 11  AWPPRRPRSSTDRPTPPRTASGPSRTPARPPRTRPSAPGRIRRAAASPPPFPPAPARRRG 70

Query: 325 ------SALTSRLPTCPSTCTVATWSRAPRSSWRTCCRMTWTRLSCPPAPAAPPLCWPPL 486
                 SA  +    CPS+C                         C   P +PP C+PP 
Sbjct: 71  CFSGDFSASAAPARCCPSSC-------------------------CARRPRSPPFCFPPP 105

Query: 487 CKVSNLRGRLRPVLC 531
                 R   RP  C
Sbjct: 106 AAAPARRAH-RPPRC 119

 Score = 21.2 bits (43), Expect(2) = 4e-07
 Identities = 9/21 (42%), Positives = 10/21 (46%)
 Frame = -1

Query: 73  RVALQGRSCRWRPPGRRRTRP 11
           R A  G  CR  P G R + P
Sbjct: 174 RTAASGTRCRGTPSGTRCSAP 194

>ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]
          Length = 250

 Score = 56.2 bits (134), Expect = 5e-07
 Identities = 61/201 (30%), Positives = 76/201 (37%), Gaps = 3/201 (1%)
 Frame = -2

Query: 693 PRQPPRTPCHARAQPFWTSAARPHVSPNSFSRTPTPAHSTPISARCS*ADSHPPT*HGPE 514
           PR+ P      RA P     A P  +P + S T TP   +P           PPT     
Sbjct: 63  PRRTPPRASPRRAPP----RASPRRTPPTASPTRTPPTESPART--------PPT---AS 107

Query: 513 PAAQVTDFAQRR-PAQWGRGRRGRAAQPRPRHPTAGPPRTPWRATPRRHRTGRRARR*PR 337
           PA   +  + RR P +    R    A PR   P A P RTP RA+P R       +R P 
Sbjct: 108 PARTPSRASPRRTPPRASPTRTPPRASPRRTPPRASPRRTPPRASPTRAPPRASPKRTPP 167

Query: 336 SQRAPRTRPRRPRCRT--SSGPASSAHPWGCCRRPRWSSSPPAAPHRHRSQPPRCPGWPG 163
                RT PR    RT  +  PA +       R P  +S     P   R+ P R P    
Sbjct: 168 RASPTRTPPRASPTRTPPTESPARTPPTASPARTPSRASPRRMPP---RASPTRTPPRAS 224

Query: 162 PTRSRRRSGGGWAGPWGPPGS 100
           PTR+  R+      P   P S
Sbjct: 225 PTRTPPRASPKRTPPTASPTS 245

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 58/189 (30%), Positives = 73/189 (37%), Gaps = 7/189 (3%)
 Frame = -2

Query: 651 PFWTSAAR--PHVSPNSFSRTPTPAHSTPISARCS*ADSHPPT*HGPEPAAQVTDFAQRR 478
           P+ TS  R  P  SP     T +PA + P ++        PP      PA        R 
Sbjct: 4   PYTTSLTRTPPTASPARTPPTESPARTPPTASPAR----TPPR---ASPA--------RT 48

Query: 477 PAQWGRGRRGRAAQPRPRHPTAGPPRTPWRATPRRHRTGRRARR*PRSQRAPRTRPRRPR 298
           P +   GR    A PR   P A P R P RA+PRR        R P ++   RT P    
Sbjct: 49  PPRASPGRTPPRASPRRTPPRASPRRAPPRASPRRTPPTASPTRTPPTESPARTPPTASP 108

Query: 297 CRTSSGPASSAHPWGCCRRPRWS---SSPPAAPHR--HRSQPPRCPGWPGPTRSRRRSGG 133
            RT S  +    P      PR S   + P A+P R   R+ P R P    PTR+  R+  
Sbjct: 109 ARTPSRASPRRTP------PRASPTRTPPRASPRRTPPRASPRRTPPRASPTRAPPRASP 162

Query: 132 GWAGPWGPP 106
               P   P
Sbjct: 163 KRTPPRASP 171

 Score = 37.4 bits (85), Expect = 0.25
 Identities = 37/127 (29%), Positives = 42/127 (32%), Gaps = 1/127 (0%)
 Frame = -2

Query: 483 RRPAQWGRGRRGRAAQPRPRHPTAGPPRTPWRATPRRHRTGRRARR*PRSQRAPRTRPR- 307
           R P      R    A P    PT  P RTP  A+P R        R P      RT PR 
Sbjct: 2   RTPYTTSLTRTPPTASPARTPPTESPARTPPTASPARTPPRASPARTPPRASPGRTPPRA 61

Query: 306 RPRCRTSSGPASSAHPWGCCRRPRWSSSPPAAPHRHRSQPPRCPGWPGPTRSRRRSGGGW 127
            PR          A P    RR   ++SP   P      P R P    P R+  R+    
Sbjct: 62  SPRRTPPRASPRRAPPRASPRRTPPTASPTRTP--PTESPARTPPTASPARTPSRASPRR 119

Query: 126 AGPWGPP 106
             P   P
Sbjct: 120 TPPRASP 126

 Score = 34.7 bits (78), Expect = 1.6
 Identities = 52/153 (33%), Positives = 57/153 (36%), Gaps = 7/153 (4%)
 Frame = +1

Query: 85  SRARTATRWPPWACP--AAP*TTP*---PRRAWPSWAPRRLTSMAMRCSWWTTGPAR-PS 246
           S ART  R  P   P  A+P  TP    PRRA P  +PRR           T  P R P 
Sbjct: 44  SPARTPPRASPGRTPPRASPRRTPPRASPRRAPPRASPRRTPP--------TASPTRTPP 95

Query: 247 TTSPRMC*RSWA*RCPTPRPARPSSRSALTSRLPTCPSTCTVATWSRAPRSSWRTCCRMT 426
           T SP       A   PT  PAR  SR A   R P   S       +   R+  R   R T
Sbjct: 96  TESP-------ARTPPTASPARTPSR-ASPRRTPPRASPTRTPPRASPRRTPPRASPRRT 147

Query: 427 WTRLSCPPA-PAAPPLCWPPLCKVSNLRGRLRP 522
             R S   A P A P   PP    +    R  P
Sbjct: 148 PPRASPTRAPPRASPKRTPPRASPTRTPPRASP 180

>ref|ZP_00057775.1| COG1205: Distinct helicase family with a unique C-terminal domain
           including a metal-binding cysteine cluster [Thermobifida
           fusca]
          Length = 1958

 Score = 55.8 bits (133), Expect = 7e-07
 Identities = 65/214 (30%), Positives = 73/214 (33%), Gaps = 24/214 (11%)
 Frame = -2

Query: 693 PRQPPRTPCHARAQPFWTSAARPHVSPNSFSRTPTPAHSTPISARCS*ADSHPPT*HGPE 514
           P +P R P   R         RP V     +R   PA   P         +H P    P 
Sbjct: 14  PHRPARGPARRRPAGGAAGRGRPVVG-GGVARLARPARRQP---------AHLPRARRPR 63

Query: 513 PAAQVTDFAQRRPAQWGRGRRGRAAQPRPRHPTAGPPRTPWRATPRRHRTGRRARR*-PR 337
                   A   P + GR RR  A   R R P     R P R    R R  RR RR  PR
Sbjct: 64  LRRPRGGAALPGPRRGGR-RRPAARHRRDRRPAVAG-RGPGRPARLRRRGPRRRRRLCPR 121

Query: 336 SQRAPRTRPRRPRCRTSSGPASSAHPW-----------------------GCCRRPRWSS 226
            +R PR R  RPR R +       HP                           RR R   
Sbjct: 122 PRRTPRHRAARPRLRRTGPRRQRPHPHRQRPGRRTPARPGHRGRGGPAVAAAARRGRPGH 181

Query: 225 SPPAAPHRHRSQPPRCPGWPGPTRSRRRSGGGWA 124
             PAAPH HR   PR    P   R+RR +GG  A
Sbjct: 182 QRPAAPHPHR---PR----PAAARARRTAGGAGA 208

 Score = 42.0 bits (97), Expect = 0.010
 Identities = 51/145 (35%), Positives = 54/145 (37%), Gaps = 17/145 (11%)
 Frame = -2

Query: 480 RPAQWGRG--------RRGRAAQPRPRHPTAGPPRTPWRATPRRHRTG-----RRARR*P 340
           RP   GRG        RRGR    RP  P    PR P  A  RR   G     R  RR  
Sbjct: 159 RPGHRGRGGPAVAAAARRGRPGHQRPAAPHPHRPR-PAAARARRTAGGAGAQLRARRRAT 217

Query: 339 RSQRAPRTRPRRPRCRTSSGPASSAHPWGCCR-RPRWSSSPPAAPHRHRSQPPRCPGWPG 163
             +R    RPRRP  R    P   A   G  R   R S +P AA  R   QP   PG P 
Sbjct: 218 AGRRRRPARPRRPLRRLRRTPRPHARGSGQGRVAGRRSGAPGAAGRR---QP--LPGRPR 272

Query: 162 PTR---SRRRSGGGWAGPWGPPGSR 97
           P R     R + G   G   P   R
Sbjct: 273 PVRGAQQHRAAQGALPGGHRPEADR 297

 Score = 40.0 bits (92), Expect = 0.039
 Identities = 38/110 (34%), Positives = 40/110 (35%), Gaps = 7/110 (6%)
 Frame = -2

Query: 450 GRAAQPRPRHPTAGPPR------TPWRATPRRHRTGRRARR*PRSQRAPRTRPRRPRCRT 289
           G   Q RP  P  GP R         R  P       R  R  R Q A   R RRPR R 
Sbjct: 7   GAGVQGRPHRPARGPARRRPAGGAAGRGRPVVGGGVARLARPARRQPAHLPRARRPRLRR 66

Query: 288 SSGPASSAHPWGCCRRPRWSSSPPAAPHRHRSQPPRCPGWPG-PTRSRRR 142
             G A+   P       R     PAA HR   +P      PG P R RRR
Sbjct: 67  PRGGAALPGP------RRGGRRRPAARHRRDRRPAVAGRGPGRPARLRRR 110

 Score = 40.0 bits (92), Expect = 0.039
 Identities = 56/178 (31%), Positives = 66/178 (36%), Gaps = 14/178 (7%)
 Frame = +2

Query: 29  AWRAPTATTPLERHSQRPDQGQERLPGGPHGPAQPPPER----RRDLV---GPGHPGHLG 187
           A R P       R   R  +G   LPG   G  + P  R    RR  V   GPG P  L 
Sbjct: 49  ARRQPAHLPRARRPRLRRPRGGAALPGPRRGGRRRPAARHRRDRRPAVAGRGPGRPARLR 108

Query: 188 G*LRWR*GAAGGLLDQRGLRQHPQGCAEEAGPEDVLHRGRRGRVR--GAR*LRGYRRALL 361
                          +RG R+  + C          HR  R R+R  G R  R +     
Sbjct: 109 ---------------RRGPRRRRRLCPRPR--RTPRHRAARPRLRRTGPRRQRPHPHRQR 151

Query: 362 PVRWRRGVARQGVRG--GPAVG*---RGRG*AARPRRPRPHCAGRRCAKSVTCAAGSG 520
           P   RR  AR G RG  GPAV     RGR    RP  P PH      A++   A G+G
Sbjct: 152 P--GRRTPARPGHRGRGGPAVAAAARRGRPGHQRPAAPHPHRPRPAAARARRTAGGAG 207

 Score = 36.2 bits (82), Expect = 0.56
 Identities = 54/180 (30%), Positives = 66/180 (36%), Gaps = 17/180 (9%)
 Frame = -2

Query: 747 RERTPSNPIVP*LHAVVLPRQPPRTPC-HARAQPFWTSAARPHVSPNSFSRT-PTPAHST 574
           R R P+ P  P        R+  RTP  HAR       A R   +P +  R  P P    
Sbjct: 220 RRRRPARPRRP-------LRRLRRTPRPHARGSGQGRVAGRRSGAPGAAGRRQPLPGRPR 272

Query: 573 PI--SARCS*ADSHPPT*HGPEPAAQVTDFAQRRPAQWGRGRRGRAAQPRPRHPTAGPPR 400
           P+  + +   A    P  H PE   +    A RR    G  R  R   PRP    A P R
Sbjct: 273 PVRGAQQHRAAQGALPGGHRPEADRRGVRPAPRRLPDSGT-RPDRQPPPRPARVLARPAR 331

Query: 399 TPWRATPRRHRTGRRAR-R*PRS------------QRAPRTRPRRPRCRTSSGPASSAHP 259
            P R    R   GR  R R P +            +R PR R RRPR R +    +   P
Sbjct: 332 -PVRRAGHRRPPGRPGRGRLPTAGGALPAGVGGTGRRGPRPRRRRPRPRRTHPRRNRTRP 390

 Score = 34.7 bits (78), Expect = 1.6
 Identities = 45/150 (30%), Positives = 52/150 (34%), Gaps = 7/150 (4%)
 Frame = +2

Query: 56  PLERHSQRPDQGQERLPG-GPHGPAQPPPERRRDLVGPGHPGHLGG*LRWR*GAAGGLLD 232
           P  R + R    + RL   GP      P  +R     P  PGH G     R G A     
Sbjct: 120 PRPRRTPRHRAARPRLRRTGPRRQRPHPHRQRPGRRTPARPGHRG-----RGGPAVAAAA 174

Query: 233 QRGLRQHPQGCAEEAG-PEDVLHRGRRGRVRGAR*LRGYRRALL-----PVRWRRGVARQ 394
           +RG   H +  A     P     R RR        LR  RRA       P R RR + R 
Sbjct: 175 RRGRPGHQRPAAPHPHRPRPAAARARRTAGGAGAQLRARRRATAGRRRRPARPRRPLRRL 234

Query: 395 GVRGGPAVG*RGRG*AARPRRPRPHCAGRR 484
                P     G+G  A  R   P  AGRR
Sbjct: 235 RRTPRPHARGSGQGRVAGRRSGAPGAAGRR 264

 Score = 33.9 bits (76), Expect = 2.8
 Identities = 65/228 (28%), Positives = 78/228 (33%), Gaps = 24/228 (10%)
 Frame = -2

Query: 690 RQPP--RTPCHARAQPFWTSAARPHVSPNSFSRTPTPAHSTPISARCS*ADSHPPT*HGP 517
           RQ P  RTP    A+P       P V+  + +R   P H  P       A  HP   H P
Sbjct: 149 RQRPGRRTP----ARPGHRGRGGPAVA--AAARRGRPGHQRP-------AAPHP---HRP 192

Query: 516 EPAA------------------QVTDFAQRRPAQWGRGRRGRAAQPRPRHPTAGPPRTPW 391
            PAA                  + T   +RRPA+  R  R     PRP    +G  R   
Sbjct: 193 RPAAARARRTAGGAGAQLRARRRATAGRRRRPARPRRPLRRLRRTPRPHARGSGQGRVAG 252

Query: 390 RATPRRHRTGRRARR*PRSQRAPRTRPRRPRCRTSSGPASSAHPWGCCR---RPRWSSSP 220
           R   R    G   RR P   R PR      + R + G     H     R   RP     P
Sbjct: 253 R---RSGAPGAAGRRQPLPGR-PRPVRGAQQHRAAQGALPGGHRPEADRRGVRPAPRRLP 308

Query: 219 PAAPHRHRSQPPR-CPGWPGPTRSRRRSGGGWAGPWGPPGSRSCP*SG 79
            +     R  PPR       P R  RR+  G   P G PG    P +G
Sbjct: 309 DSGTRPDRQPPPRPARVLARPARPVRRA--GHRRPPGRPGRGRLPTAG 354

 Score = 33.5 bits (75), Expect = 3.6
 Identities = 44/137 (32%), Positives = 48/137 (34%), Gaps = 2/137 (1%)
 Frame = +2

Query: 89  GQERLPGGPHGPAQPPPERRR--DLVGPGHPGHLGG*LRWR*GAAGGLLDQRGLRQHPQG 262
           G   + G PH PA+ P  RR      G G P   GG  R            R  R+ P  
Sbjct: 6   GGAGVQGRPHRPARGPARRRPAGGAAGRGRPVVGGGVARLA----------RPARRQPAH 55

Query: 263 CAEEAGPEDVLHRGRRGRVRGAR*LRGYRRALLPVRWRRGVARQGVRGGPAVG*RGRG*A 442
                 P       R  R RG   L G RR       RR  AR      PAV  RG G  
Sbjct: 56  LPRARRP-------RLRRPRGGAALPGPRRG----GRRRPAARHRRDRRPAVAGRGPGRP 104

Query: 443 ARPRRPRPHCAGRRCAK 493
           AR RR  P    R C +
Sbjct: 105 ARLRRRGPRRRRRLCPR 121



EST assemble image


clone accession position
1 CM059a06_r AV390702 1 601
2 MXL033f04_r BP094972 108 514
3 MX007d04_r BP086366 290 756




Chlamydomonas reinhardtii
Kazusa DNA Research Institute