Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001514A_C01 KCC001514A_c01
(667 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO22150.1| succinyl CoA ligase beta subunit [Lycopersicon es... 311 4e-84
ref|NP_179632.1| succinyl-CoA ligase beta subunit [Arabidopsis t... 310 1e-83
gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis tha... 308 6e-83
gb|AAO52473.1| similar to Sus scrofa (Pig). Succinyl-CoA ligase ... 286 3e-76
gb|AAO51536.1| similar to Mus musculus (Mouse). 16 days embryo h... 268 7e-71
>gb|AAO22150.1| succinyl CoA ligase beta subunit [Lycopersicon esculentum]
Length = 417
Score = 311 bits (798), Expect = 4e-84
Identities = 157/205 (76%), Positives = 179/205 (86%)
Frame = +2
Query: 2 KALYTLFDKSDCTMVEVNPLAEGLDGSLIAADAKLGFDDNAAYRQKPIFDMKDESQIDPR 181
K LY LF ++DCTM+E+NPLAE D L+AADAKL FDDNAAYRQK IF ++D SQ DPR
Sbjct: 213 KKLYKLFCETDCTMLEINPLAETSDNKLVAADAKLNFDDNAAYRQKEIFSLRDSSQEDPR 272
Query: 182 EVAASKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGAPANFLDVGGSANEQQVVEA 361
EVAA+K DLNYIGLDG IGCMVNGAGLAMATMDIIK+HGG PANFLDVGG+A E QVVEA
Sbjct: 273 EVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNATEGQVVEA 332
Query: 362 FKILTGDKQVKAILVNIFGGIMKCDVIASGIVNAAKQVGVQVPLVVRLEGTNVARGKEIL 541
FKILT D++VKAILVNIFGGIMKCDVIASGIVNAAKQV ++VP++VRLEGTNV +GK IL
Sbjct: 333 FKILTADEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLKVPVIVRLEGTNVEQGKRIL 392
Query: 542 ATSCMTIITADDLDDAAKKAVASIA 616
S M +ITA+DLDDAA+KAV ++A
Sbjct: 393 KESGMKLITAEDLDDAAEKAVKALA 417
>ref|NP_179632.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
gi|21264030|sp|O82662|SUCB_ARATH Succinyl-CoA ligase
[GDP-forming] beta-chain, mitochondrial precursor
(Succinyl-CoA synthetase, beta chain) (SCS-beta)
gi|11272036|pir||T51809 succinate-CoA ligase
(ADP-forming) (EC 6.2.1.5) beta chain [imported] -
Arabidopsis thaliana gi|3660469|emb|CAA05024.1|
succinyl-CoA-ligase beta subunit [Arabidopsis thaliana]
gi|20197853|gb|AAM15283.1| succinyl-CoA ligase beta
subunit [Arabidopsis thaliana]
gi|20466482|gb|AAM20558.1| succinyl-CoA ligase beta
subunit [Arabidopsis thaliana]
gi|22136422|gb|AAM91289.1| succinyl-CoA ligase beta
subunit [Arabidopsis thaliana]
Length = 421
Score = 310 bits (794), Expect = 1e-83
Identities = 156/205 (76%), Positives = 178/205 (86%)
Frame = +2
Query: 2 KALYTLFDKSDCTMVEVNPLAEGLDGSLIAADAKLGFDDNAAYRQKPIFDMKDESQIDPR 181
K LY LF K+DCTM+E+NPLAE L+AADAKL FDDNAA+RQK +F M+D +Q DPR
Sbjct: 216 KKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKEVFAMRDPTQEDPR 275
Query: 182 EVAASKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGAPANFLDVGGSANEQQVVEA 361
EVAA+K DLNYIGLDG IGCMVNGAGLAMATMDIIK+HGG PANFLDVGG+A+E QVVEA
Sbjct: 276 EVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQVVEA 335
Query: 362 FKILTGDKQVKAILVNIFGGIMKCDVIASGIVNAAKQVGVQVPLVVRLEGTNVARGKEIL 541
FKILT D +VKAILVNIFGGIMKCDVIASGIVNAAK+V ++VP+VVRLEGTNV +GK IL
Sbjct: 336 FKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGTNVEQGKRIL 395
Query: 542 ATSCMTIITADDLDDAAKKAVASIA 616
S M +ITADDLDDAA+KAV ++A
Sbjct: 396 KESGMKLITADDLDDAAEKAVKALA 420
>gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
Length = 421
Score = 308 bits (788), Expect = 6e-83
Identities = 155/205 (75%), Positives = 177/205 (85%)
Frame = +2
Query: 2 KALYTLFDKSDCTMVEVNPLAEGLDGSLIAADAKLGFDDNAAYRQKPIFDMKDESQIDPR 181
K LY LF K+DCTM+E+NPLAE L+AADAKL FDDNAA+RQK +F M+D +Q DPR
Sbjct: 216 KKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKEVFAMRDPTQEDPR 275
Query: 182 EVAASKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGAPANFLDVGGSANEQQVVEA 361
EVAA+K DLNYIGLDG IGCMVNGAGLAMATMDIIK+HGG PANFLDVGG+A+E QVVEA
Sbjct: 276 EVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQVVEA 335
Query: 362 FKILTGDKQVKAILVNIFGGIMKCDVIASGIVNAAKQVGVQVPLVVRLEGTNVARGKEIL 541
FKILT D +VKAILVNIFGGIMKCDVIASGIVNAAK+V ++VP+VV LEGTNV +GK IL
Sbjct: 336 FKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVSLEGTNVEQGKRIL 395
Query: 542 ATSCMTIITADDLDDAAKKAVASIA 616
S M +ITADDLDDAA+KAV ++A
Sbjct: 396 KESGMKLITADDLDDAAEKAVKALA 420
>gb|AAO52473.1| similar to Sus scrofa (Pig). Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS-beta)
[Dictyostelium discoideum]
Length = 420
Score = 286 bits (731), Expect = 3e-76
Identities = 144/199 (72%), Positives = 166/199 (83%)
Frame = +2
Query: 8 LYTLFDKSDCTMVEVNPLAEGLDGSLIAADAKLGFDDNAAYRQKPIFDMKDESQIDPREV 187
LY LF KSD T VE+NP AE DG +I DAK+ FDDNA++RQK IF+M+D ++ DPREV
Sbjct: 217 LYQLFIKSDATQVEINPFAETTDGQVICMDAKINFDDNASFRQKEIFEMRDTAEEDPREV 276
Query: 188 AASKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGAPANFLDVGGSANEQQVVEAFK 367
A K+ LNYIGLDG+IGCMVNGAGLAMATMDIIK+ GG PANFLDVGGSA+EQ V EAFK
Sbjct: 277 EAGKFGLNYIGLDGNIGCMVNGAGLAMATMDIIKLKGGIPANFLDVGGSASEQAVTEAFK 336
Query: 368 ILTGDKQVKAILVNIFGGIMKCDVIASGIVNAAKQVGVQVPLVVRLEGTNVARGKEILAT 547
ILT D +VK +LVNIFGGIMKCD+IASGIVNA+KQVG+++PLVVRLEGTNV GKEIL
Sbjct: 337 ILTKDPRVKCLLVNIFGGIMKCDIIASGIVNASKQVGLKIPLVVRLEGTNVNIGKEILEK 396
Query: 548 SCMTIITADDLDDAAKKAV 604
S + I +A DLDDAA KAV
Sbjct: 397 SGLNITSASDLDDAAIKAV 415
>gb|AAO51536.1| similar to Mus musculus (Mouse). 16 days embryo head cDNA, RIKEN
full-length enriched library, clone:C130090E04
product:succinate-Coenzyme A ligase, ADP-forming, beta
subunit, full insert sequence [Dictyostelium discoideum]
Length = 445
Score = 268 bits (684), Expect = 7e-71
Identities = 128/201 (63%), Positives = 165/201 (81%)
Frame = +2
Query: 2 KALYTLFDKSDCTMVEVNPLAEGLDGSLIAADAKLGFDDNAAYRQKPIFDMKDESQIDPR 181
K LY F K+DCT+VE+NPLAE G ++ DAKL FDDNAA+R IF ++D+SQ DPR
Sbjct: 223 KKLYDFFIKNDCTLVEINPLAETASGDVLCMDAKLNFDDNAAFRHPDIFKLRDKSQEDPR 282
Query: 182 EVAASKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGAPANFLDVGGSANEQQVVEA 361
EV A+++DLNYIGLDG+IGC+VNGAGLAMA+MDIIK++GG+PANFLDVGG A ++QV EA
Sbjct: 283 EVKAAEFDLNYIGLDGNIGCLVNGAGLAMASMDIIKLYGGSPANFLDVGGGATQKQVTEA 342
Query: 362 FKILTGDKQVKAILVNIFGGIMKCDVIASGIVNAAKQVGVQVPLVVRLEGTNVARGKEIL 541
K+++ DK+VK+ILVNIFGGIMKCDVIA GI+ A K++ + PLVVRL+GTNV K+I+
Sbjct: 343 IKLISSDKKVKSILVNIFGGIMKCDVIALGIIAALKELSIATPLVVRLQGTNVEAAKKIM 402
Query: 542 ATSCMTIITADDLDDAAKKAV 604
S + +I AD+LDDAA+K+V
Sbjct: 403 EDSGLRLIAADNLDDAAQKSV 423
