Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001506A_C01 KCC001506A_c01
(598 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM65018.1| coatomer-like protein, epsilon subunit [Arabidops... 204 6e-52
ref|NP_174351.1| coatomer protein epsilon subunit (COPE) family ... 204 6e-52
ref|NP_181030.1| coatomer protein epsilon subunit (COPE) family ... 204 6e-52
dbj|BAA94964.1| epsilon1-COP [Glycine max] 195 5e-49
dbj|BAA94965.1| epsilon2-COP [Glycine max] 192 3e-48
>gb|AAM65018.1| coatomer-like protein, epsilon subunit [Arabidopsis thaliana]
Length = 289
Score = 204 bits (520), Expect = 6e-52
Identities = 100/196 (51%), Positives = 143/196 (72%)
Frame = +1
Query: 1 NVRNSFYLGAYNTVINEAADLDNLNEVDSIERDCFVYRSYIALGSYDLVISEIRDSAATG 180
N+RN FYLGAY IN + ++ NL++ D +ERDC V+R+YIALGSY LVISEI ++AAT
Sbjct: 9 NLRNHFYLGAYQAAINNS-EIPNLSQEDIVERDCLVHRAYIALGSYQLVISEIDEAAATP 67
Query: 181 LLAVKLLAQYLSNKKSKDDVLATLADWLADSACNRNSMVLLVAGMIHAHEGNYPEALKAC 360
L AVKLLA YLS+ ++K+ +++L +WLAD N+++ L+AG I HE +Y EALK
Sbjct: 68 LQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDYNEALKHT 127
Query: 361 HGSNSLELQALCVQVYLKMDRADKAEVQVKSMSATDDDATLTQLATAWVGQALGGAKVQE 540
H +++L AL VQ+++KM R+D AE Q++ M D+D TLTQLA+AW+ A+GG+K+QE
Sbjct: 128 HSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQE 187
Query: 541 AAYVYQELGEKYNYTA 588
A ++Q+ EKY T+
Sbjct: 188 AYLIFQDFSEKYPMTS 203
>ref|NP_174351.1| coatomer protein epsilon subunit (COPE) family [Arabidopsis
thaliana] gi|25350283|pir||F86431 hypothetical protein
T5I8.8 [imported] - Arabidopsis thaliana
gi|4587519|gb|AAD25750.1|AC007060_8 Strong similarity to
F19I3.7 gi|3033380 putative coatomer epsilon subunit
from Arabidopsis thaliana BAC gb|AC004238. ESTs
gb|Z17908, gb|AA728673, gb|N96555, gb|H76335,
gb|AA712463, gb|W43247, gb|T45611, gb|T21160, gb|T14119
and AI100483 come from this gene
gi|13194794|gb|AAK15559.1|AF348588_1 putative coatomer
protein, epsilon subunit [Arabidopsis thaliana]
gi|13878125|gb|AAK44140.1|AF370325_1 putative coatomer
protein, epsilon subunit [Arabidopsis thaliana]
gi|17104797|gb|AAL34287.1| putative coatomer protein,
epsilon subunit [Arabidopsis thaliana]
Length = 292
Score = 204 bits (520), Expect = 6e-52
Identities = 100/196 (51%), Positives = 143/196 (72%)
Frame = +1
Query: 1 NVRNSFYLGAYNTVINEAADLDNLNEVDSIERDCFVYRSYIALGSYDLVISEIRDSAATG 180
N+RN FYLGAY IN + ++ NL++ D +ERDC V+R+YIALGSY LVISEI ++AAT
Sbjct: 12 NLRNHFYLGAYQAAINNS-EIPNLSQEDIVERDCLVHRAYIALGSYQLVISEIDEAAATP 70
Query: 181 LLAVKLLAQYLSNKKSKDDVLATLADWLADSACNRNSMVLLVAGMIHAHEGNYPEALKAC 360
L AVKLLA YLS+ ++K+ +++L +WLAD N+++ L+AG I HE +Y EALK
Sbjct: 71 LQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDYNEALKHT 130
Query: 361 HGSNSLELQALCVQVYLKMDRADKAEVQVKSMSATDDDATLTQLATAWVGQALGGAKVQE 540
H +++L AL VQ+++KM R+D AE Q++ M D+D TLTQLA+AW+ A+GG+K+QE
Sbjct: 131 HSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQE 190
Query: 541 AAYVYQELGEKYNYTA 588
A ++Q+ EKY T+
Sbjct: 191 AYLIFQDFSEKYPMTS 206
>ref|NP_181030.1| coatomer protein epsilon subunit (COPE) family [Arabidopsis
thaliana] gi|6647445|sp|O64748|COPE_ARATH Probable
coatomer epsilon subunit (Epsilon-coat protein)
(Epsilon-COP) gi|7484874|pir||T00466 coatomer complex
epsilon chain homolog F19I3.7 - Arabidopsis thaliana
gi|3033380|gb|AAC12824.1| putative coatomer epsilon
subunit [Arabidopsis thaliana]
gi|19715634|gb|AAL91638.1| At2g34840/F19I3.7
[Arabidopsis thaliana] gi|22655446|gb|AAM98315.1|
At2g34840/F19I3.7 [Arabidopsis thaliana]
Length = 293
Score = 204 bits (520), Expect = 6e-52
Identities = 101/195 (51%), Positives = 142/195 (72%)
Frame = +1
Query: 1 NVRNSFYLGAYNTVINEAADLDNLNEVDSIERDCFVYRSYIALGSYDLVISEIRDSAATG 180
N+RN+FYLGAY T IN + ++ NL+ +++ERDC V+RSYIALGSY LVISEI +SAAT
Sbjct: 13 NLRNNFYLGAYQTAINNS-EIANLSPENAVERDCLVFRSYIALGSYQLVISEIDESAATP 71
Query: 181 LLAVKLLAQYLSNKKSKDDVLATLADWLADSACNRNSMVLLVAGMIHAHEGNYPEALKAC 360
L AVKLLA YLS ++K+ +++L +WLADS N + L+AG+I HE +Y E LK
Sbjct: 72 LQAVKLLAMYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYNETLKHT 131
Query: 361 HGSNSLELQALCVQVYLKMDRADKAEVQVKSMSATDDDATLTQLATAWVGQALGGAKVQE 540
H +++L AL VQ+++KM RA+ AE Q++ M D+D TLTQLA+AW+ A+GG+K+QE
Sbjct: 132 HAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQE 191
Query: 541 AAYVYQELGEKYNYT 585
A ++++ EKY T
Sbjct: 192 AYLIFEDFSEKYPMT 206
>dbj|BAA94964.1| epsilon1-COP [Glycine max]
Length = 290
Score = 195 bits (495), Expect = 5e-49
Identities = 97/196 (49%), Positives = 138/196 (69%)
Frame = +1
Query: 1 NVRNSFYLGAYNTVINEAADLDNLNEVDSIERDCFVYRSYIALGSYDLVISEIRDSAATG 180
N+RN+FYLGAY IN ++D+ NL++ D++ERD V+R YIALG VISEI D A T
Sbjct: 9 NLRNNFYLGAYQAAIN-SSDVANLSQEDTLERDTLVHRCYIALGQLQFVISEIHDDAPTP 67
Query: 181 LLAVKLLAQYLSNKKSKDDVLATLADWLADSACNRNSMVLLVAGMIHAHEGNYPEALKAC 360
L AVKLLA Y S+ +KD +A+L +WLAD A N+ + LVAG++ HE ++ EALK
Sbjct: 68 LQAVKLLALYFSSPDTKDSAIASLKEWLADPAIGNNATLRLVAGLVFLHENDFNEALKHT 127
Query: 361 HGSNSLELQALCVQVYLKMDRADKAEVQVKSMSATDDDATLTQLATAWVGQALGGAKVQE 540
+ ++EL AL +Q+++KM R+D AE Q++ M D+D TLTQLA AW+ A+GG+K+QE
Sbjct: 128 NAGGTMELHALNIQIFIKMHRSDYAERQLRIMQQIDEDHTLTQLANAWLNLAVGGSKIQE 187
Query: 541 AAYVYQELGEKYNYTA 588
A ++Q+L E+Y T+
Sbjct: 188 AYLIFQDLSERYQSTS 203
>dbj|BAA94965.1| epsilon2-COP [Glycine max]
Length = 288
Score = 192 bits (488), Expect = 3e-48
Identities = 97/196 (49%), Positives = 136/196 (68%)
Frame = +1
Query: 1 NVRNSFYLGAYNTVINEAADLDNLNEVDSIERDCFVYRSYIALGSYDLVISEIRDSAATG 180
N+RN+ YLGAY IN + D+ NL++ DS+ERD V+R YIALG VISEI D A T
Sbjct: 7 NLRNNLYLGAYQAAIN-SGDVTNLSQEDSLERDTLVHRCYIALGQLQFVISEIHDDAPTP 65
Query: 181 LLAVKLLAQYLSNKKSKDDVLATLADWLADSACNRNSMVLLVAGMIHAHEGNYPEALKAC 360
L AVKLLA Y S+ +KD +A+L +WLAD A N+ + LVAG++ HE ++ EALK
Sbjct: 66 LQAVKLLALYFSSPDTKDSAIASLKEWLADPAIANNATLRLVAGLVFLHENDFNEALKHT 125
Query: 361 HGSNSLELQALCVQVYLKMDRADKAEVQVKSMSATDDDATLTQLATAWVGQALGGAKVQE 540
+ +++L AL VQ+++KM R+D AE Q++ M D+D TLTQLA AW+ A+GG+K+QE
Sbjct: 126 NAGGTMDLHALNVQIFIKMHRSDYAERQLRIMQQIDEDHTLTQLANAWLNLAVGGSKIQE 185
Query: 541 AAYVYQELGEKYNYTA 588
A ++Q+L E+Y T+
Sbjct: 186 AYLIFQDLSERYQSTS 201
