KCC001505A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001505A_C01 KCC001505A_c01
ctccgtatagtgtcttgcactccttccccCACGTAACTCTACTCCTCCAAGTCGCCAAAA
TGGCCACCGCCGCAGTTCACGAGGACTATGCTTCCGTCTCGAAACTCGCCAAGTACCCGT
TCGAGCCCTACTGGCCCAGTGCCAAGCTCAGGATTTGCGTGACAGGCGCGGGCGGCTTCA
TTGCCAGCCACCTGGCCAAGCGTCTCAAGTCTGAGGGTCACTACATCGTGGCTTGCGACT
GGAAGCGCAATGAGCACTTCGCGGAGGAGGAGTTCTGCCATGAGTTCCACCTGGTGGACC
TGCGCGTGTACGACAATTGCAAGAAGGTGTGCGAGGGCTGTGAGCACGTGTTCAACCTGG
CCGCCGACATGGGCGGTATGGGCTTCATCCAGTCCAACCACTCCGTCATCATGTACAACA
ACACGATGGTGTCTTTCAACATGATGGAGGCGGCGCGCGTCACCGGCATCAAGCGCTTCT
TCTACGCCTCGTCCGCCTGCATCTACCCCGAGTACAAGCAGCTGGATGTGGAGGTGGAGG
GCGGCGGCCTCAAGGAGGACGATGCCTGGCCCGCCCAGCCCCAAGATGCGTACGGCCTGG
AGAAGCTGGCCACCGAGGAGCTGTGCAAGCACTACAACAAGGACTTCGGCATTGAGTGCC
GCATCGCGCGCTTCCACAACATTTACGGCCCGCACGGCACCTGGAAGGGCGGCCGCGAGA
AGGCACCCGCGGCCTTCTGTCGCAAGGTGCTCACCTCCACCTCGGAGATCGAGATGTGGG
GCGACGGCAAGCAGACGCGCTCCTTCACCTTCATTGACGACTGCGTGGAGGGCATCTTGC
GCATCACCAAGTCTGACTTCCGCGACCCCCTGAACCTGGGCTCCACCGAGATGGTGTCCA
TGAACGGCATGATGGAGCTGGCCATGTCCTTCGACGACAAGAAGCTGCCCATCAAGCACA
TCCCCGGCCCCGAGGGCGTGCGCGGCCGCAACAGCGACAACAAGCTCATCCTGGAGAAGC
TGGGCTGGGAGCCCACCGTGACGCTCGCGGACGGCCTGAAGCGCACCTACGAGTGGATCA
AGGGGCAGCTGGATGCGGAGAAGGAGAAGGGCGTGGACGCAACCAAGTACAGCCACAGCA
CCATCGTGCAGACCAGCGCGCCCATCGAGCTGGGGTCGCTGCGCAATGCGGACGGCGAGG
AGGGCTTCGAnGTAAGGGCCAGGCCAGGGCTGGCGCCGATTTGAAGGTCCC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001505A_C01 KCC001505A_c01
         (1251 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAM08784.1|AC016780_14 Putative epimerase/dehydratase [Oryza ...   585  e-166
ref|NP_198236.1| NAD-dependent epimerase/dehydratase family [Ara...   577  e-163
emb|CAD62190.1| Ata17 protein [Saccharothrix mutabilis subsp. ca...   328  9e-89
gb|AAG02361.1|AF210249_20 sugar epimerase BlmG [Streptomyces ver...   248  2e-64
ref|ZP_00050097.1| COG0451: Nucleoside-diphosphate-sugar epimera...   133  7e-30

>gb|AAM08784.1|AC016780_14 Putative epimerase/dehydratase [Oryza sativa]
            gi|31432094|gb|AAP53779.1| putative epimerase/dehydratase
            [Oryza sativa (japonica cultivar-group)]
          Length = 378

 Score =  585 bits (1508), Expect = e-166
 Identities = 276/382 (72%), Positives = 313/382 (81%)
 Frame = +3

Query: 57   KMATAAVHEDYASVSKLAKYPFEPYWPSAKLRICVTGAGGFIASHLAKRLKSEGHYIVAC 236
            K  TA     YA + +      E YWPS KLRI +TGAGGFI SH+A+RLKSEGHYI+A 
Sbjct: 6    KNGTAYGEYTYAELER------EQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIAS 59

Query: 237  DWKRNEHFAEEEFCHEFHLVDLRVYDNCKKVCEGCEHVFNLAADMGGMGFIQSNHSVIMY 416
            DWK+NEH  E+ FCHEFHLVDLRV DNC KV  G +HVFNLAADMGGMGFIQSNHSVIMY
Sbjct: 60   DWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIMY 119

Query: 417  NNTMVSFNMMEAARVTGIKRFFYASSACIYPEYKQLDVEVEGGGLKEDDAWPAQPQDAYG 596
            NNTM+SFNM+EAAR+ G+KRFFYASSACIYPE+KQL+  V    LKE DAWPA+PQDAYG
Sbjct: 120  NNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVS---LKESDAWPAEPQDAYG 176

Query: 597  LEKLATEELCKHYNKDFGIECRIARFHNIYGPHGTWKGGREKAPAAFCRKVLTSTSEIEM 776
            LEKLATEELCKHY KDFGIECR+ RFHNIYGP GTWKGGREKAPAAFCRK  TST   EM
Sbjct: 177  LEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEM 236

Query: 777  WGDGKQTRSFTFIDDCVEGILRITKSDFRDPLNLGSTEMVSMNGMMELAMSFDDKKLPIK 956
            WGDG QTRSFTFID+CVEG+LR+TKSDFR+P+N+GS EMVSMN M E+ +SF+D++LPI 
Sbjct: 237  WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIH 296

Query: 957  HIPGPEGVRGRNSDNKLILEKLGWEPTVTLADGLKRTYEWIKGQLDAEKEKGVDATKYSH 1136
            HIPGPEGVRGRNSDN LI EKLGW PT+ L DGL+ TY WIK Q++ EK +GVD   Y  
Sbjct: 297  HIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYGS 356

Query: 1137 STIVQTSAPIELGSLRNADGEE 1202
            S +V T AP++LGSLR ADG+E
Sbjct: 357  SKVVSTQAPVQLGSLRAADGKE 378

>ref|NP_198236.1| NAD-dependent epimerase/dehydratase family [Arabidopsis thaliana]
            gi|16323113|gb|AAL15291.1| AT5g28840/F7P1_20 [Arabidopsis
            thaliana] gi|16323180|gb|AAL15324.1| AT5g28840/F7P1_20
            [Arabidopsis thaliana] gi|21436019|gb|AAM51587.1|
            AT5g28840/F7P1_20 [Arabidopsis thaliana]
          Length = 377

 Score =  577 bits (1486), Expect = e-163
 Identities = 269/360 (74%), Positives = 304/360 (83%)
 Frame = +3

Query: 123  EPYWPSAKLRICVTGAGGFIASHLAKRLKSEGHYIVACDWKRNEHFAEEEFCHEFHLVDL 302
            E YWPS  L+I +TGAGGFIASH+A+RLK EGHY++A DWK+NEH  E+ FC EFHLVDL
Sbjct: 20   EQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDL 79

Query: 303  RVYDNCKKVCEGCEHVFNLAADMGGMGFIQSNHSVIMYNNTMVSFNMMEAARVTGIKRFF 482
            RV +NC KV EG +HVFNLAADMGGMGFIQSNHSVIMYNNTM+SFNM+EAAR+ GIKRFF
Sbjct: 80   RVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFF 139

Query: 483  YASSACIYPEYKQLDVEVEGGGLKEDDAWPAQPQDAYGLEKLATEELCKHYNKDFGIECR 662
            YASSACIYPE+KQL  E     LKE DAWPA+PQDAYGLEKLATEELCKHYNKDFGIECR
Sbjct: 140  YASSACIYPEFKQL--ETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECR 197

Query: 663  IARFHNIYGPHGTWKGGREKAPAAFCRKVLTSTSEIEMWGDGKQTRSFTFIDDCVEGILR 842
            I RFHNIYGP GTWKGGREKAPAAFCRK  TST   EMWGDG QTRSFTFID+CVEG+LR
Sbjct: 198  IGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLR 257

Query: 843  ITKSDFRDPLNLGSTEMVSMNGMMELAMSFDDKKLPIKHIPGPEGVRGRNSDNKLILEKL 1022
            +TKSDFR+P+N+GS EMVSMN M E+ +SF++KKLPI HIPGPEGVRGRNSDN LI EKL
Sbjct: 258  LTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKL 317

Query: 1023 GWEPTVTLADGLKRTYEWIKGQLDAEKEKGVDATKYSHSTIVQTSAPIELGSLRNADGEE 1202
            GW P + L +GL+ TY WIK Q++ EK KG D + Y  S +V T AP++LGSLR ADG+E
Sbjct: 318  GWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRAADGKE 377

>emb|CAD62190.1| Ata17 protein [Saccharothrix mutabilis subsp. capreolus]
          Length = 384

 Score =  328 bits (842), Expect = 9e-89
 Identities = 165/346 (47%), Positives = 227/346 (64%), Gaps = 3/346 (0%)
 Frame = +3

Query: 135  PSAKLRICVTGAGGFIASHLAKRLKSEGHYIVACDWKRNEHFAEEEFCHEFHLVDLRVYD 314
            P  K R  VTGAGGFI  HL   L+ +G+++   D +  E    E    EF L DLR   
Sbjct: 46   PPGKKRALVTGAGGFIGHHLVSYLRRQGYWVRGADLRHPEFRPTE--ADEFVLADLREPG 103

Query: 315  NCKKVCEGCEHVFNLAADMGGMGFIQSNHSVIMYNNTMVSFNMMEAARVTGIKRFFYASS 494
              +KV EG + V++LAADMGGMGFI +NH+ IM NN+++  N +EAAR   + RFFYASS
Sbjct: 104  VAEKVVEGVDEVYSLAADMGGMGFISANHATIMKNNSLIDLNTLEAARKARVNRFFYASS 163

Query: 495  ACIYPEYKQLDVEVEGGGLKEDDAWPAQPQDAYGLEKLATEELCKHYNKDFGIECRIARF 674
            AC+YP Y+Q   EV   GL+E+DA+PA P+D YG EKL TE LC +Y +++G+  R+AR 
Sbjct: 164  ACVYPAYRQNITEVV--GLREEDAYPAAPEDGYGWEKLNTEHLCSYYREEYGLPVRVARL 221

Query: 675  HNIYGPHGTWKGGREKAPAAFCRKVLTST--SEIEMWGDGKQTRSFTFIDDCVEGILRIT 848
            HN+YGP+ T+ GGREK+PAA  RK   +     +E+WGDG QTRS+ ++DDCVEGI R+T
Sbjct: 222  HNVYGPYCTYDGGREKSPAALARKAALAEPGGRMEIWGDGMQTRSYCYVDDCVEGIHRLT 281

Query: 849  KSDFRDPLNLGSTEMVSMNGMMELAMSFDDKK-LPIKHIPGPEGVRGRNSDNKLILEKLG 1025
            +SDF  P+NLG+  ++++N +  + +    K  + ++H PGP+GVRGRNSDN L+  +LG
Sbjct: 282  RSDFPGPVNLGTERLIAINDLARMLLEIAGKPGVTLEHRPGPQGVRGRNSDNALLRAELG 341

Query: 1026 WEPTVTLADGLKRTYEWIKGQLDAEKEKGVDATKYSHSTIVQTSAP 1163
            WEP+  L  G+  TY WI+   D E+  G   T  + S IV+   P
Sbjct: 342  WEPSTPLETGMAATYHWIRS--DIERRAG---TVQAASEIVRVGDP 382

>gb|AAG02361.1|AF210249_20 sugar epimerase BlmG [Streptomyces verticillus]
          Length = 325

 Score =  248 bits (633), Expect = 2e-64
 Identities = 135/318 (42%), Positives = 186/318 (58%), Gaps = 4/318 (1%)
 Frame = +3

Query: 159  VTGAGGFIASHLAKRLKSEGHYIVACDWKRNEHFAEEEFCHEFHLVDLRVYDNCKKVCEG 338
            VTGAGGFI SHL +RL  +GH +   D     +   E    EF + DLR      +   G
Sbjct: 6    VTGAGGFIGSHLVRRLVRDGHRVRGVDLVPPRYGPGE--AQEFVIADLRDAAQAARAVAG 63

Query: 339  CEHVFNLAADMGGMGFIQSNHSVIMYNNTMVSFNMMEAARVTGIKRFFYASSACIYPEYK 518
             + VF LAA+MGG+G+  +  + I+++N ++S + +EA R  G++   Y SSAC+YP   
Sbjct: 64   ADSVFALAANMGGIGWTHTAPAEILHDNLLISTHTIEACRAAGVRTTVYTSSACVYPA-- 121

Query: 519  QLDVEVEGGGLKEDDAWPAQPQDAYGLEKLATEELCKHYNKDFGIECRIARFHNIYGPHG 698
             L  E +   L ED  +PA+P   YG EKL TE LC  Y +  G++ + AR H IYGP G
Sbjct: 122  SLQREPDAAPLAEDPVFPAEPDMEYGWEKLTTEILCGAYRRSHGMDIKTARLHAIYGPLG 181

Query: 699  TWKGGREKAPAAFCRKVLT---STSEIEMWGDGKQTRSFTFIDDCVEGILRITKSDFRDP 869
            T+ G R K+ +  C KV        EIE+WGDG QTRS+ ++DDCVEG++R+ +SD  +P
Sbjct: 182  TYTGPRAKSLSMLCDKVARIPGDEGEIEVWGDGTQTRSYCYVDDCVEGLIRLARSDVAEP 241

Query: 870  LNLGSTEMVSMNGMMELAMSFDDKKLPIKHIPG-PEGVRGRNSDNKLILEKLGWEPTVTL 1046
            +N+GS E V +  ++E       KK+     P  P G RGR SDN    E LGW P  +L
Sbjct: 242  VNIGSEERVDIASLVERIAGVAGKKVRCAFAPDRPVGPRGRVSDNTRCRELLGWAPETSL 301

Query: 1047 ADGLKRTYEWIKGQLDAE 1100
            A GL+RTY WI+ Q+ AE
Sbjct: 302  AAGLERTYPWIERQVLAE 319

>ref|ZP_00050097.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Magnetospirillum
           magnetotacticum]
          Length = 154

 Score =  133 bits (334), Expect = 7e-30
 Identities = 67/150 (44%), Positives = 99/150 (65%)
 Frame = +3

Query: 159 VTGAGGFIASHLAKRLKSEGHYIVACDWKRNEHFAEEEFCHEFHLVDLRVYDNCKKVCEG 338
           VTGAGGFI  HL   L+  G+++   D K  +    +    EF L DLR +++C++  +G
Sbjct: 9   VTGAGGFIGGHLVTYLRRHGYHVRGVDLKHPDFGPSD--ADEFVLADLRSFEDCREAVKG 66

Query: 339 CEHVFNLAADMGGMGFIQSNHSVIMYNNTMVSFNMMEAARVTGIKRFFYASSACIYPEYK 518
            + V+NLAADMGG+G+I   H+ I +NNTM+S  M++AA    ++RF ++SSAC+YP++ 
Sbjct: 67  VDEVYNLAADMGGIGYISGAHASITFNNTMISAQMLKAAFDAKVERFLFSSSACVYPQHL 126

Query: 519 QLDVEVEGGGLKEDDAWPAQPQDAYGLEKL 608
           Q    V    LKE+DA+PA P++ YGLEKL
Sbjct: 127 QDVPSVI--PLKEEDAFPAAPEEGYGLEKL 154



EST assemble image


clone accession position
1 MXL080g12_r BP097755 1 366
2 MX038e02_r BP087598 30 394
3 CM056g05_r AV390294 34 625
4 MX007a02_r BP086341 45 434
5 CM094d06_r AV393250 50 572
6 LCL041a08_r AV628389 204 553
7 MX234h11_r BP091174 246 530
8 MX022f03_r BP087001 424 807
9 LC040c02_r AV621729 476 1006
10 LC020b05_r AV620290 497 1009
11 HC034a11_r AV634490 508 1053
12 CM076g01_r AV391677 698 1313
13 MX003g07_r BP086195 723 1117




Chlamydomonas reinhardtii
Kazusa DNA Research Institute