Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001497A_C01 KCC001497A_c01
(622 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB64921.1| chloroplast DNA recombination protein RECA [Chla... 303 2e-81
ref|NP_895554.1| RecA bacterial DNA recombination protein [Proch... 125 4e-28
sp|P14582|RECA_SYNP2 RecA protein (Recombinase A) gi|72991|pir||... 122 4e-27
ref|NP_926362.1| recombination protein [Gloeobacter violaceus] g... 122 4e-27
gb|AAA62510.1| RecA 122 5e-27
>dbj|BAB64921.1| chloroplast DNA recombination protein RECA [Chlamydomonas
reinhardtii]
Length = 414
Score = 303 bits (775), Expect = 2e-81
Identities = 152/155 (98%), Positives = 152/155 (98%)
Frame = +1
Query: 124 MQTAIQMPSGGCLSSGARARSSARATQQILCAPRRDVVAKARRTKTATTTYTQGERPDAD 303
MQTAIQMPSGGCLSSGARARSSARATQQILCAPRRDVVAKARRTKTATTTYTQGERPDAD
Sbjct: 1 MQTAIQMPSGGCLSSGARARSSARATQQILCAPRRDVVAKARRTKTATTTYTQGERPDAD 60
Query: 304 TKAKLFNETVDRITRRFGDGSIMRLSDSVTANIETFPSGSLTLDAALGGGYPRGRIIEVY 483
TKAKLFNETVDRITRRFGDGSIMRLSDSVTANIETFPSGSLTLDAALGGGYPRGRIIEVY
Sbjct: 61 TKAKLFNETVDRITRRFGDGSIMRLSDSVTANIETFPSGSLTLDAALGGGYPRGRIIEVY 120
Query: 484 GPEASGKTTLAMHACAEIQRLGGTVGYIDVEHAFD 588
GPEASGKTTLAMH C EIQRLGGTV YIDVEHAFD
Sbjct: 121 GPEASGKTTLAMHGCGEIQRLGGTVAYIDVEHAFD 155
>ref|NP_895554.1| RecA bacterial DNA recombination protein [Prochlorococcus marinus
str. MIT 9313] gi|33635578|emb|CAE21902.1| RecA
bacterial DNA recombination protein [Prochlorococcus
marinus str. MIT 9313]
Length = 379
Score = 125 bits (315), Expect = 4e-28
Identities = 57/99 (57%), Positives = 72/99 (72%)
Frame = +1
Query: 292 PDADTKAKLFNETVDRITRRFGDGSIMRLSDSVTANIETFPSGSLTLDAALGGGYPRGRI 471
P + K N + +I R FG GSIMRL D+ +ETFP+G+LTLD ALGGGYP+GR+
Sbjct: 20 PRPGERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFPTGALTLDLALGGGYPKGRV 79
Query: 472 IEVYGPEASGKTTLAMHACAEIQRLGGTVGYIDVEHAFD 588
+EVYGPE+SGKTTL +HA AE+QR GG ++D EHA D
Sbjct: 80 VEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALD 118
>sp|P14582|RECA_SYNP2 RecA protein (Recombinase A) gi|72991|pir||RQYCA recombination
protein recA - Synechococcus sp. (strain PCC 7002)
gi|154602|gb|AAA88636.1| recA gene product
Length = 348
Score = 122 bits (306), Expect = 4e-27
Identities = 54/94 (57%), Positives = 71/94 (75%)
Frame = +1
Query: 307 KAKLFNETVDRITRRFGDGSIMRLSDSVTANIETFPSGSLTLDAALGGGYPRGRIIEVYG 486
K K N +++I R FG G+IMRL D+ + T PSG+LTLD A+GGG+PRGRI+E+YG
Sbjct: 10 KEKALNLVLNQIERNFGKGAIMRLGDAAQMKVATIPSGALTLDQAMGGGFPRGRIVEIYG 69
Query: 487 PEASGKTTLAMHACAEIQRLGGTVGYIDVEHAFD 588
PE+SGKTT+A+HA AE+Q+ GG +ID EHA D
Sbjct: 70 PESSGKTTVALHAIAEVQKAGGVAAFIDAEHALD 103
>ref|NP_926362.1| recombination protein [Gloeobacter violaceus]
gi|35213988|dbj|BAC91357.1| recombination protein
[Gloeobacter violaceus]
Length = 369
Score = 122 bits (306), Expect = 4e-27
Identities = 58/115 (50%), Positives = 75/115 (64%)
Frame = +1
Query: 244 ARRTKTATTTYTQGERPDADTKAKLFNETVDRITRRFGDGSIMRLSDSVTANIETFPSGS 423
AR T + D K K + +I R FG+G+IMRL ++ +ET PSG+
Sbjct: 2 ARTTDDSKKAAPAAGTADEAQKQKALKMVLTQIKRNFGEGAIMRLGENTRIRVETVPSGA 61
Query: 424 LTLDAALGGGYPRGRIIEVYGPEASGKTTLAMHACAEIQRLGGTVGYIDVEHAFD 588
+TLD ALGGG PRGR+IE+YGPE+SGKTTLA+HA AEIQ+ GG ++D EHA D
Sbjct: 62 ITLDLALGGGLPRGRVIEIYGPESSGKTTLALHAIAEIQKTGGVAAFVDAEHALD 116
>gb|AAA62510.1| RecA
Length = 319
Score = 122 bits (305), Expect = 5e-27
Identities = 60/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Frame = +1
Query: 259 TATTTYTQGERPDADTKAKLFNETVDRITRRFGDGSIMRLSDSVTANIETFPSGSLTLDA 438
T TT + A + +E + RI + FG GSIM L D+ +ET+PSGS+ LD
Sbjct: 3 TKKTTKKDDKDSQASGRKAALDEALKRIEKNFGKGSIMVLGDNALTQVETYPSGSVKLDV 62
Query: 439 ALG-GGYPRGRIIEVYGPEASGKTTLAMHACAEIQRLGGTVGYIDVEHAFD 588
ALG GGYP+GRIIE+YGPE+SGKTTLA+HA AE+Q+ GGT YID E+A D
Sbjct: 63 ALGVGGYPKGRIIEIYGPESSGKTTLALHAVAEVQKAGGTAAYIDAENALD 113
