Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001488A_C01 KCC001488A_c01
(289 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_851918.1| immediate early protein ICP0 [Cercopithecine he... 45 3e-04
gb|AAB96638.1| precollagen D [Mytilus edulis] 44 5e-04
gb|AAF25206.1| EBNA2-like protein [cercopithicine herpesvirus 15... 43 0.001
gb|AAC82365.1| unknown [Myxococcus xanthus] 42 0.003
ref|NP_771502.1| bll4862 [Bradyrhizobium japonicum] gi|27353126|... 41 0.005
>ref|NP_851918.1| immediate early protein ICP0 [Cercopithecine herpesvirus 1]
gi|30984503|ref|NP_851859.1| immediate early protein
ICP0 [Cercopithecine herpesvirus 1]
gi|30844300|gb|AAP41476.1| immediate early protein ICP0
[Cercopithecine herpesvirus 1]
gi|30844317|gb|AAP41493.1| immediate early protein ICP0
[Cercopithecine herpesvirus 1]
Length = 700
Score = 45.1 bits (105), Expect = 3e-04
Identities = 37/103 (35%), Positives = 42/103 (39%), Gaps = 9/103 (8%)
Frame = -3
Query: 284 PHCAGRPAAE------CPARSLAAPAPWRSCPVRPAVWAMARAA*QSTGPPPGGCTGARR 123
P RPAA C + AA A R A A S PPPGG RR
Sbjct: 426 PQARARPAAPPQAPPLCAVVAAAAAARKRPASASEAAPATRGPKRPSLPPPPGGPAPPRR 485
Query: 122 SAARARWTAARSAAASPPRAWGP---PEPSRRCP*RSSWPPPP 3
+ ARA A +AA PPR P P P + P + PPPP
Sbjct: 486 APARA---PALAAAPPPPRPLAPPAAPPPPQAAPPPPAAPPPP 525
Score = 34.3 bits (77), Expect = 0.50
Identities = 33/114 (28%), Positives = 43/114 (36%), Gaps = 19/114 (16%)
Frame = -3
Query: 287 PPHCAGRPAAECPARSLAAPAPWR----SCPVRPAVWAMARAA*QSTGPPPGGCTGARRS 120
PP P A+ P + A P P + V P A +A + PP A +
Sbjct: 387 PPGAQVPPGAQVPPGAQAQPRPAAQAQPAAQVPPGAQARPQARARPAAPPQAPPLCAVVA 446
Query: 119 AARARWTAARSAAASPPRAWGP-----------PEPSRRCP*R----SSWPPPP 3
AA A SA+ + P GP P P RR P R ++ PPPP
Sbjct: 447 AAAAARKRPASASEAAPATRGPKRPSLPPPPGGPAPPRRAPARAPALAAAPPPP 500
>gb|AAB96638.1| precollagen D [Mytilus edulis]
Length = 922
Score = 44.3 bits (103), Expect = 5e-04
Identities = 38/95 (40%), Positives = 43/95 (45%)
Frame = +1
Query: 1 GGGGGHEDRQGHLRLGSGGPQARGGLAAALRAAVHLALAALRLAPVQPPGGGPVDCQAAR 180
GGG G G+ G+GG GG +AA RAA A AA G G AA+
Sbjct: 782 GGGAGGAGAGGNGGAGAGGAGGNGGGSAAARAAAQAAAAA--------GGNGGAAQAAAQ 833
Query: 181 AIAQTAGRTGQLRHGAGAARLRAGHSAAGRPAQCG 285
A A A +G GAGAA RA SAA R G
Sbjct: 834 AAASAAANSGL---GAGAA--RAAASAAARATVTG 863
>gb|AAF25206.1| EBNA2-like protein [cercopithicine herpesvirus 15]
gi|18025470|gb|AAK95414.1| EBNA-2 [cercopithicine
herpesvirus 15]
Length = 605
Score = 42.7 bits (99), Expect = 0.001
Identities = 35/103 (33%), Positives = 42/103 (39%), Gaps = 8/103 (7%)
Frame = -3
Query: 287 PPHCAGRPAAEC---PARSLAAP-APWRSCPVRPAV--WAMARAA*QSTGPP-PGGCTGA 129
P H P A C P + + P APWR P RP WA Q T PP P
Sbjct: 216 PSHHTQSPWAPCRPPPPQHMPPPSAPWRPSPPRPPQPHWAYRPHYTQHTQPPWPPYRPPP 275
Query: 128 RRSAARARWTAARSAAASPPRA-WGPPEPSRRCP*RSSWPPPP 3
+ A R S +PPRA WGP ++ P + W P P
Sbjct: 276 TKHQAPPRVPWRPSPVQAPPRAPWGPSPTKQQAPPPAPWGPSP 318
>gb|AAC82365.1| unknown [Myxococcus xanthus]
Length = 542
Score = 41.6 bits (96), Expect = 0.003
Identities = 34/83 (40%), Positives = 36/83 (42%), Gaps = 8/83 (9%)
Frame = +3
Query: 3 GRR--GP*RSSRASPTGLWRTPSPRRAGGGAPCC--CPPRPRC-APPGACTAPWGWTC-- 161
GRR P R +R +P G R P R CC CP PRC A P A G TC
Sbjct: 86 GRRCPAPSRHARRNPAGPSRRCGPPRKSTPTRCCTPCPAPPRCRARPSAPAPSAGRTCPT 145
Query: 162 -GLSSCARHCPNCWANRAASPRG 227
G SSCA C C R S G
Sbjct: 146 AGPSSCASGC--CPTGRCGSAPG 166
Score = 36.2 bits (82), Expect = 0.13
Identities = 37/117 (31%), Positives = 45/117 (37%), Gaps = 22/117 (18%)
Frame = -3
Query: 287 PPHCAGRPAAECPARSLAAP-----------APWRSCPVRPAV---WAMARAA*QSTGPP 150
PP C RP+A P+ P P C P A QS P
Sbjct: 125 PPRCRARPSAPAPSAGRTCPTAGPSSCASGCCPTGRCGSAPGPTPHGAEPSPPSQSPSPA 184
Query: 149 PGGCTGARRSAAR-ARWTAARSAAAS---PPRAWGPPEP--SRRCP--*RSSWPPPP 3
P G RR+ R AR +AA + A + PPR G P +R P +S PPPP
Sbjct: 185 PASSGGRRRTHPRPARASAAGATAPACLPPPRCCGRPGTGCARTAPPSTSASHPPPP 241
Score = 35.4 bits (80), Expect = 0.23
Identities = 32/102 (31%), Positives = 44/102 (42%), Gaps = 8/102 (7%)
Frame = -3
Query: 284 PHCAG-RPAAECPARSLAAPAPWRSCPVRPAVWAMARAA*QSTGPPPGGC----TGARRS 120
PH A P ++ P+ + A+ R RPA + A A + PPP C TG R+
Sbjct: 169 PHGAEPSPPSQSPSPAPASSGGRRRTHPRPARASAAGATAPACLPPPRCCGRPGTGCART 228
Query: 119 A---ARARWTAARSAAASPPRAWGPPEPSRRCP*RSSWPPPP 3
A A + +PPRA G P + P + PPPP
Sbjct: 229 APPSTSASHPPPPRSPGTPPRASGSPAAAPAPPSPACRPPPP 270
Score = 30.4 bits (67), Expect = 7.2
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Frame = +3
Query: 66 PRRAGGGAPCCCPPRPRCAPPGACTAPWGWTCGLSSCARHCPN----CWANRAASPRGG 230
PR +G A PP P C PP T P L + P+ W + A P+ G
Sbjct: 248 PRASGSPAAAPAPPSPACRPPPPGTTPAPRNAALPALPCISPSRQRATWLHLLAQPQDG 306
>ref|NP_771502.1| bll4862 [Bradyrhizobium japonicum] gi|27353126|dbj|BAC50127.1|
bll4862 [Bradyrhizobium japonicum USDA 110]
Length = 887
Score = 40.8 bits (94), Expect = 0.005
Identities = 29/83 (34%), Positives = 33/83 (38%), Gaps = 4/83 (4%)
Frame = -3
Query: 266 PAAECPARSLAAPAPWRSCP----VRPAVWAMARAA*QSTGPPPGGCTGARRSAARARWT 99
P P +AAP P R P RPA MAR A PPP A R
Sbjct: 804 PRVSAPPPRMAAPPPPRPAPPVAVARPAPPPMARPA-----PPPPVARPAPPPPPRVAVA 858
Query: 98 AARSAAASPPRAWGPPEPSRRCP 30
AA PPR PP +++CP
Sbjct: 859 PPPRPAAPPPRPAAPPPAAKKCP 881
Score = 31.2 bits (69), Expect = 4.2
Identities = 29/95 (30%), Positives = 36/95 (37%)
Frame = -3
Query: 287 PPHCAGRPAAECPARSLAAPAPWRSCPVRPAVWAMARAA*QSTGPPPGGCTGARRSAARA 108
PP AG+P P+ A P R PA A+ A PPP ++ AR
Sbjct: 751 PPAAAGKPVVPPPS---AVHEPIRPQAHPPAPPQAAKPA----APPP-----RPQAVARP 798
Query: 107 RWTAARSAAASPPRAWGPPEPSRRCP*RSSWPPPP 3
+A PPR PP P P + P PP
Sbjct: 799 TPPPPPRVSAPPPRMAAPPPPRPAPPVAVARPAPP 833
