Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001468A_C01 KCC001468A_c01
(676 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [... 46 6e-04
ref|NP_253747.1| polyhydroxyalkanoate synthesis protein PhaF [Ps... 41 0.019
pir||S29309 hypothetical protein 4 (phaC2 3' region) - Pseudomon... 41 0.019
dbj|BAC10714.1| P0431H09.26 [Oryza sativa (japonica cultivar-gro... 40 0.024
gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays] 40 0.024
>pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [imported] -
Boreogadus saida gi|2078483|gb|AAC60129.1| antifreeze
glycopeptide AFGP polyprotein precursor
Length = 507
Score = 45.8 bits (107), Expect = 6e-04
Identities = 63/222 (28%), Positives = 77/222 (34%), Gaps = 14/222 (6%)
Frame = -2
Query: 645 ATAQNPGTAQTP*HASGQTVNLKTQAP*SPIRQPA-----------APPA*QPAAISVAL 499
ATA P TA TP A+ T A + PA A PA A + A
Sbjct: 62 ATAATPATAATPATAATAATTAATAATAATAATPARAARAATPATAATPATAATAATAAT 121
Query: 498 RATSRGVLRLRNTCCASCLPLLSATQAKACAHTNMLRSSSQGNSTHAVRARDKCANTTPE 319
AT+ R A+ P +AT A A S++ + A TP
Sbjct: 122 AATAETPARAATPATAAT-PATAATPATAATAATAATSATAATAARAATPATAATPATPA 180
Query: 318 -AARACTAARPVTAVRSKLPLPVPARHTLEVARHRA-PLRKPAAAEPPRATASSLGCWIR 145
AARA AA P TA + T A A P R AA P ATA +
Sbjct: 181 TAARAARAATPATAATAATAATAATAATAATAATAATPARAARAATP--ATAPT------ 232
Query: 144 RGCRRPLPQRRPWWAGCCA-APSQSQPAGPRHGSTQPQAAWL 22
P P A A AP+ + PA +T AA L
Sbjct: 233 -----PATAATPATAATAATAPTAATPARAARAATPATAATL 269
Score = 42.7 bits (99), Expect = 0.005
Identities = 54/217 (24%), Positives = 68/217 (30%), Gaps = 11/217 (5%)
Frame = -2
Query: 645 ATAQNPGTAQTP*HASGQTVNLKTQAP*SPIRQPAAPPA*QPAAISVALRATSRGVLRLR 466
A A P TA TP A+ P + AP A PA + A + L
Sbjct: 222 ARAATPATAPTPATAA---------TPATAATAATAPTAATPARAARAATPATAATLATA 272
Query: 465 NTCCASCLPLLSATQAKACAHTNMLRSSSQGN----------STHAVRARDKCANTTPEA 316
T P +AT A A R+++ +T A A A T
Sbjct: 273 ATPATPATPATAATDATAATAATPARAATPATPATAATPATPATAATAATAATAATAATP 332
Query: 315 ARACTAARPVTAVRSKLPLPVPARHTLEVARHRA-PLRKPAAAEPPRATASSLGCWIRRG 139
ARA AA P TA T A A P R AA P A ++
Sbjct: 333 ARAARAATPATAATPATAATAATAATAATAATAATPARAARAATPATAATAATAATAATA 392
Query: 138 CRRPLPQRRPWWAGCCAAPSQSQPAGPRHGSTQPQAA 28
P R A + + PA P +T AA
Sbjct: 393 ATAATPARAARAATPATPATPATPATPATAATAATAA 429
Score = 38.1 bits (87), Expect = 0.12
Identities = 48/159 (30%), Positives = 56/159 (35%), Gaps = 2/159 (1%)
Frame = -2
Query: 645 ATAQNPGTAQTP*HASGQTVNLKTQAP*SPIRQPAAPPA*QPAAISVALRATSRGVLRLR 466
ATA TA T A+ P R AA PA P + A AT+
Sbjct: 192 ATAATAATAATAATAATAATAATAATPARAAR--AATPATAPTPATAATPATAATAA--- 246
Query: 465 NTCCASCLPLLSATQAK-ACAHTNMLRSSSQGNSTHAVRARDKCANTTPEAARACTAARP 289
T + P +A A A A T ++ +T A A D A T ARA T A P
Sbjct: 247 -TAPTAATPARAARAATPATAATLATAATPATPATPATAATDATAATAATPARAATPATP 305
Query: 288 VTAVRSKLPLPVPARHTLEVARHRA-PLRKPAAAEPPRA 175
TA P T A A P R AA P A
Sbjct: 306 ATAATPATPATAATAATAATAATAATPARAARAATPATA 344
Score = 37.0 bits (84), Expect = 0.27
Identities = 52/214 (24%), Positives = 66/214 (30%), Gaps = 8/214 (3%)
Frame = -2
Query: 645 ATAQNPGTAQTP*HASGQTVNLKTQAP*SPIRQPAAPPA*QPAAISV---ALRATSRGVL 475
AT TA TP A+ P +P A A A + A RA +
Sbjct: 285 ATDATAATAATPARAATPATPATAATPATPATAATAATAATAATAATPARAARAATPATA 344
Query: 474 RLRNTCCASCLPLLSATQAKACAHTNMLRSSSQGNS----THAVRARDKCANTTPEAARA 307
T + +AT A A R+++ + T A A A T AARA
Sbjct: 345 ATPATAATAATAATAATAATAATPARAARAATPATAATAATAATAATAATAATPARAARA 404
Query: 306 CTAARPVTAVRSKLPLPVPARHTLEVARHRAPLRKPA-AAEPPRATASSLGCWIRRGCRR 130
T A P T P T A A A AA P ++ G
Sbjct: 405 ATPATPATPATPATPATAATAATAATAATAATAATAATAATAPTPARAARAATPATGA-- 462
Query: 129 PLPQRRPWWAGCCAAPSQSQPAGPRHGSTQPQAA 28
P P A + + A P ST AA
Sbjct: 463 -TPATAPTAGTAATAATAATAATPARASTPATAA 495
Score = 36.2 bits (82), Expect = 0.46
Identities = 43/162 (26%), Positives = 55/162 (33%), Gaps = 1/162 (0%)
Frame = -2
Query: 648 IATAQNPGTAQTP*HASGQTVNLKTQAP*SPIRQPAAPPA*QPAAISVALRATSRGVLRL 469
+ATA P T TP A+ P AA PA A + A AT+
Sbjct: 269 LATAATPATPATPATAATDATAATAATP-----ARAATPATPATAATPATPATAA----- 318
Query: 468 RNTCCASCLPLLSATQAKAC-AHTNMLRSSSQGNSTHAVRARDKCANTTPEAARACTAAR 292
T + +AT A+A A T ++ +T A A A T ARA AA
Sbjct: 319 --TAATAATAATAATPARAARAATPATAATPATAATAATAATAATAATAATPARAARAAT 376
Query: 291 PVTAVRSKLPLPVPARHTLEVARHRAPLRKPAAAEPPRATAS 166
P TA + T A PA P A+
Sbjct: 377 PATAATAATAATAATAATAATPARAARAATPATPATPATPAT 418
Score = 33.1 bits (74), Expect = 3.9
Identities = 33/122 (27%), Positives = 42/122 (34%)
Frame = -2
Query: 645 ATAQNPGTAQTP*HASGQTVNLKTQAP*SPIRQPAAPPA*QPAAISVALRATSRGVLRLR 466
ATA TA TP A+ P A PA A + A AT+
Sbjct: 387 ATAATAATAATPARAARAATPATPATP--------ATPATPATAATAATAATAATAATAA 438
Query: 465 NTCCASCLPLLSATQAKACAHTNMLRSSSQGNSTHAVRARDKCANTTPEAARACTAARPV 286
A+ P + A T +++ T A A A T A+ TAA PV
Sbjct: 439 TAATAATAPTPARAARAATPATGATPATAPTAGTAATAATAATAATPARASTPATAATPV 498
Query: 285 TA 280
TA
Sbjct: 499 TA 500
>ref|NP_253747.1| polyhydroxyalkanoate synthesis protein PhaF [Pseudomonas aeruginosa
PA01] gi|11350815|pir||G83013 polyhydroxyalkanoate
synthesis protein PhaF PA5060 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gi|9951352|gb|AAG08445.1|AE004919_6 polyhydroxyalkanoate
synthesis protein PhaF [Pseudomonas aeruginosa PAO1]
Length = 309
Score = 40.8 bits (94), Expect = 0.019
Identities = 40/155 (25%), Positives = 63/155 (39%), Gaps = 9/155 (5%)
Frame = -2
Query: 600 SGQTVNLKTQAP*SPIRQPAAPPA*QPAAISVALRATSRGVLRLRNTCCASCLPLLSATQ 421
+G +V +A P +PAA PA + AA A + ++ + + P T
Sbjct: 134 TGVSVKPAAKAAAKPAAKPAAKPAAKTAAAKPAAKPAAKAAAK------PAAKPAAKKTA 187
Query: 420 AKACAHTNMLRSSSQGNSTHAVRARDKCANTT-------PEAAR--ACTAARPVTAVRSK 268
AK A + +++ + A + K A P AA+ A AA+P A +K
Sbjct: 188 AKTAAAKPAAKPAAKPTAKAAAKPATKPAAKAAAKPAAKPAAAKPAAKPAAKPAAATAAK 247
Query: 267 LPLPVPARHTLEVARHRAPLRKPAAAEPPRATASS 163
A+ + + P KPAAA+P ASS
Sbjct: 248 PAAKPAAKPAAKKPAAKKPAAKPAAAKPAAPAASS 282
>pir||S29309 hypothetical protein 4 (phaC2 3' region) - Pseudomonas aeruginosa
(fragment)
Length = 217
Score = 40.8 bits (94), Expect = 0.019
Identities = 40/155 (25%), Positives = 63/155 (39%), Gaps = 9/155 (5%)
Frame = -2
Query: 600 SGQTVNLKTQAP*SPIRQPAAPPA*QPAAISVALRATSRGVLRLRNTCCASCLPLLSATQ 421
+G +V +A P +PAA PA + AA A + ++ + + P T
Sbjct: 42 TGVSVKPAAKAAAKPAAKPAAKPAAKTAAAKPAAKPAAKAAAK------PAAKPAAKKTA 95
Query: 420 AKACAHTNMLRSSSQGNSTHAVRARDKCANTT-------PEAAR--ACTAARPVTAVRSK 268
AK A + +++ + A + K A P AA+ A AA+P A +K
Sbjct: 96 AKTAAAKPAAKPAAKPTAKAAAKPATKPAAKAAAKPAAKPAAAKPAAKPAAKPAAATAAK 155
Query: 267 LPLPVPARHTLEVARHRAPLRKPAAAEPPRATASS 163
A+ + + P KPAAA+P ASS
Sbjct: 156 PAAKPAAKPAAKKPAAKKPAAKPAAAKPAAPAASS 190
>dbj|BAC10714.1| P0431H09.26 [Oryza sativa (japonica cultivar-group)]
Length = 199
Score = 40.4 bits (93), Expect = 0.024
Identities = 49/179 (27%), Positives = 71/179 (39%), Gaps = 4/179 (2%)
Frame = -2
Query: 555 IRQPAAPP---A*QPAAISVA-LRATSRGVLRLRNTCCASCLPLLSATQAKACAHTNMLR 388
+R+P PP A PAA S A +RA +R R + C P SA+ A C+ T
Sbjct: 25 LRRPPRPPPPSALSPAAASAAAVRAIARHDRRRHSRRCRPRPPPSSASPAAVCSVTG--- 81
Query: 387 SSSQGNSTHAVRARDKCANTTPEAARACTAARPVTAVRSKLPLPVPARHTLEVARHRAPL 208
HAV R + P A + A AVR+ + R + R P
Sbjct: 82 ------HGHAVARRPRRRPPRPPPPSALSPAAATAAVRA-----IAGRGLSYRSLRRHP- 129
Query: 207 RKPAAAEPPRATASSLGCWIRRGCRRPLPQRRPWWAGCCAAPSQSQPAGPRHGSTQPQA 31
P + P ++ ++ +R RRP P RRP +A S + A S + +A
Sbjct: 130 --PRPSLPSVSSLTATSAVVREPRRRPRPHRRPPRPPLQSASSPATTAAASTSSAEERA 186
>gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]
Length = 274
Score = 40.4 bits (93), Expect = 0.024
Identities = 39/146 (26%), Positives = 57/146 (38%), Gaps = 3/146 (2%)
Frame = -2
Query: 432 SATQAKACAHTNMLRSSSQGNSTHAVRARDKCANTTPEAARACTAARPVTAVRSKLPLPV 253
+AT+A + A S++ G T A +T +A A P T+ R P P
Sbjct: 4 AATRASSAATATPSTSTAAGTPTSACSPTATSTSTRTSSASTAPTACPGTS-RGSRPSPC 62
Query: 252 PARHTLEVARHRAPLRKPAAAEPPRATASSLGCWIRRGCRRPLPQRRPWWAGCCAAPSQS 73
+ T + AP R+P A +S CR P P+ RP C +P+ +
Sbjct: 63 SSTATSSTS---APGRRPRGTTTSTAWSSPWTASPCASCREPTPRGRPAPCRRCPSPAPA 119
Query: 72 QPAGPRHGSTQPQAAW---LPSCRRS 4
+P ST + PS RRS
Sbjct: 120 RPTACSSRSTAGSPSGPTPCPSQRRS 145
