KCC001462A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001462A_C01 KCC001462A_c01
gagcaggaccatcaccgacatgcgctgatataagtctattttccacctctatacAGTACA
TTTACTTGGCCATACACTATCAAGCTTGCGCCCTCAGACACTCGAACAAGTCTTTGAACT
CGACTAACTCGACTCGCAACCATGGTCAAGATTTACATCATCTTCTATAGCACCTATGGT
CACATCAAGACCATGGCTGAGGCCGTGAAGAAGGGTGTGGAGCAGGTGGAGGGCGTGGAG
GCAAAGATTTGGCAGGTGGCCGAGACGCTGCCCGCCGAGGTTCTGGAGAAGATGCACGCT
CCCCCCAAGTCGGACTACCCCATCATCACGTCGAAGGAGCTGACCGAGGCCGATGGCTTC
GTGTTCGGCTTCCCCACCCGCTTCGGCATGATGGCCGCCCAGATGAAGTCGTTCTTTGAC
ACCACCGGCCAGCTGTGGCAGGCGGGCGCGCTGCATGGCAAGCCCGCGTCCATGTTCACT
TCCACCGCCACCCAAGGTGGCGGCCAGGAGAACACCATCATGACCGCCGTAGACCAGCTG
ACTCACCACGGCATGATCTTCGTGCCCGCTGGCTATGCTGCCGGCGGCATCATGTTTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001462A_C01 KCC001462A_c01
         (598 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB92583.1| putative 1,4-benzoquinone reductase [Oryza sativ...   216  2e-55
ref|NP_200261.1| quinone reductase, putative [Arabidopsis thalia...   212  4e-54
dbj|BAA22940.1| LEDI-3 protein [Lithospermum erythrorhizon]           212  4e-54
gb|AAG53945.1|AF304462_1 quinone-oxidoreductase QR2 [Triphysaria...   211  6e-54
emb|CAD31838.1| putative quinone oxidoreductase [Cicer arietinum]     210  1e-53

>dbj|BAB92583.1| putative 1,4-benzoquinone reductase [Oryza sativa (japonica
           cultivar-group)]
          Length = 203

 Score =  216 bits (550), Expect = 2e-55
 Identities = 101/151 (66%), Positives = 117/151 (76%)
 Frame = +1

Query: 145 VKIYIIFYSTYGHIKTMAEAVKKGVEQVEGVEAKIWQVAETLPAEVLEKMHAPPKSDYPI 324
           VK+Y+++YS YGH+  +AE +KKG   +EGVEAKIWQV ETL  EVL KM APPK D P 
Sbjct: 3   VKVYVVYYSMYGHVAKLAEEIKKGASSIEGVEAKIWQVPETLHEEVLGKMGAPPKPDVPT 62

Query: 325 ITSKELTEADGFVFGFPTRFGMMAAQMKSFFDTTGQLWQAGALHGKPASMFTSTATQGGG 504
           IT +ELTEADG +FGFPTRFGMMAAQMK+FFD TG LW   +L GKPA +F ST TQGGG
Sbjct: 63  ITPQELTEADGILFGFPTRFGMMAAQMKAFFDATGGLWSEQSLAGKPAGIFFSTGTQGGG 122

Query: 505 QENTIMTAVDQLTHHGMIFVPAGYAAGGIMF 597
           QE T +TA+ QLTHHGM+FVP GY  G  MF
Sbjct: 123 QETTPLTAITQLTHHGMVFVPVGYTFGAKMF 153

>ref|NP_200261.1| quinone reductase, putative [Arabidopsis thaliana]
           gi|8885593|dbj|BAA97523.1| 1,4-benzoquinone
           reductase-like; Trp repressor binding protein-like
           [Arabidopsis thaliana] gi|21539481|gb|AAM53293.1|
           1,4-benzoquinone reductase-like protein [Arabidopsis
           thaliana] gi|25084252|gb|AAN72205.1| 1,4-benzoquinone
           reductase-like protein [Arabidopsis thaliana]
          Length = 204

 Score =  212 bits (539), Expect = 4e-54
 Identities = 99/150 (66%), Positives = 116/150 (77%)
 Frame = +1

Query: 148 KIYIIFYSTYGHIKTMAEAVKKGVEQVEGVEAKIWQVAETLPAEVLEKMHAPPKSDYPII 327
           K+YI++YS YGH++ +AE ++KG   VEGVEAK+WQV ETL  E L KM APPKS+ PII
Sbjct: 4   KVYIVYYSMYGHVEKLAEEIRKGAASVEGVEAKLWQVPETLHEEALSKMSAPPKSESPII 63

Query: 328 TSKELTEADGFVFGFPTRFGMMAAQMKSFFDTTGQLWQAGALHGKPASMFTSTATQGGGQ 507
           T  EL EADGFVFGFPTRFGMMAAQ K+F D TG LW+A AL GKPA +F ST +QGGGQ
Sbjct: 64  TPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRAQALAGKPAGIFYSTGSQGGGQ 123

Query: 508 ENTIMTAVDQLTHHGMIFVPAGYAAGGIMF 597
           E T +TA+ QL HHGM+FVP GY  G  MF
Sbjct: 124 ETTALTAITQLVHHGMLFVPIGYTFGAGMF 153

>dbj|BAA22940.1| LEDI-3 protein [Lithospermum erythrorhizon]
          Length = 201

 Score =  212 bits (539), Expect = 4e-54
 Identities = 97/147 (65%), Positives = 117/147 (78%)
 Frame = +1

Query: 145 VKIYIIFYSTYGHIKTMAEAVKKGVEQVEGVEAKIWQVAETLPAEVLEKMHAPPKSDYPI 324
           VK+YI++YSTYGH+  +AE +KKG E V+GVE K+WQVAETLP +VL KM+APPK D PI
Sbjct: 3   VKLYIVYYSTYGHVLKLAEEMKKGAESVDGVEVKLWQVAETLPEDVLGKMYAPPKGDAPI 62

Query: 325 ITSKELTEADGFVFGFPTRFGMMAAQMKSFFDTTGQLWQAGALHGKPASMFTSTATQGGG 504
           IT  EL EADG++FGFPTRFGMM AQ K+FFD+TG LWQ+G L GKPA  F S+ +QGGG
Sbjct: 63  ITPDELAEADGYLFGFPTRFGMMPAQFKAFFDSTGGLWQSGGLVGKPAGFFISSGSQGGG 122

Query: 505 QENTIMTAVDQLTHHGMIFVPAGYAAG 585
           QE T +TA+ QL HHGMI+VP G   G
Sbjct: 123 QETTALTAITQLVHHGMIYVPTGGTFG 149

>gb|AAG53945.1|AF304462_1 quinone-oxidoreductase QR2 [Triphysaria versicolor]
          Length = 205

 Score =  211 bits (537), Expect = 6e-54
 Identities = 98/150 (65%), Positives = 116/150 (77%)
 Frame = +1

Query: 148 KIYIIFYSTYGHIKTMAEAVKKGVEQVEGVEAKIWQVAETLPAEVLEKMHAPPKSDYPII 327
           K+YI++YSTYGH++ +A+ +KKG E V  VE K+WQV E L  EVL KM APPKSD P+I
Sbjct: 4   KVYIVYYSTYGHVERLAQEIKKGAESVGNVEVKLWQVPEILSDEVLGKMWAPPKSDVPVI 63

Query: 328 TSKELTEADGFVFGFPTRFGMMAAQMKSFFDTTGQLWQAGALHGKPASMFTSTATQGGGQ 507
           T  EL EADG +FGFPTRFGMMAAQ K+FFD+TG LW+  AL GKPA +F ST TQGGGQ
Sbjct: 64  TPDELVEADGIIFGFPTRFGMMAAQFKAFFDSTGGLWKTQALAGKPAGIFFSTGTQGGGQ 123

Query: 508 ENTIMTAVDQLTHHGMIFVPAGYAAGGIMF 597
           E T +TA+ QLTHHGMI+VP GY  G  MF
Sbjct: 124 ETTALTAITQLTHHGMIYVPIGYTFGADMF 153

>emb|CAD31838.1| putative quinone oxidoreductase [Cicer arietinum]
          Length = 204

 Score =  210 bits (534), Expect = 1e-53
 Identities = 98/150 (65%), Positives = 116/150 (77%)
 Frame = +1

Query: 148 KIYIIFYSTYGHIKTMAEAVKKGVEQVEGVEAKIWQVAETLPAEVLEKMHAPPKSDYPII 327
           K+YI++YSTYGH+  +AE ++KG   VEGVEAK+WQV ETLP +VL KM APPKSD PII
Sbjct: 5   KVYIVYYSTYGHVHKLAEEIQKGAASVEGVEAKLWQVPETLPEDVLGKMGAPPKSDVPII 64

Query: 328 TSKELTEADGFVFGFPTRFGMMAAQMKSFFDTTGQLWQAGALHGKPASMFTSTATQGGGQ 507
           T  EL EADG +FGFPTRFGMMAAQ K+F D TG LW+  AL GKPA +F ST +QGGGQ
Sbjct: 65  TPNELPEADGLLFGFPTRFGMMAAQFKAFMDATGGLWRTQALAGKPAGIFYSTGSQGGGQ 124

Query: 508 ENTIMTAVDQLTHHGMIFVPAGYAAGGIMF 597
           E T +T++ QL HHG+IFVP GY  G  MF
Sbjct: 125 ETTPLTSITQLVHHGLIFVPIGYTFGAGMF 154



EST assemble image


clone accession position
1 HC020b05_r AV633378 1 361
2 LC090f03_r AV625298 55 572
3 CM051e08_r AV389852 64 599




Chlamydomonas reinhardtii
Kazusa DNA Research Institute