KCC001453A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001453A_C01 KCC001453A_c01
gagaacgacgaggtggctctgaagaagtgcctgccgcgcaccagcctgtggctgtggcca
ttgaggctggacgccaagtcGTTCCAGCTGTACGGTGTGTGTGTGTGTACGACGACCCCA
CCTGCGGCACCAGCCTGAACCACGGCGTGCTGGTGGTGGGCTACGGCAAGGACGTGACTG
GATCCGGATCCAACTACTGGATCGTGAAGAACAGCTGGGGCGCGGAGTGGGGCGACGCCG
GCTACATCCGCCTCAAGATGGGCTCCACCGACGCCGAGGGCCTGTGCGGCATTGCCATGG
CTCCCTCCTACCCGGTCAAGACGGGCCCCAACCCGTCCACCTCCGGCCCCATTCCTTGCC
CCTCGGCTAAGCCCTGTCTCTAGTCCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001453A_C01 KCC001453A_c01
         (387 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||S57776 cysteine proteinase (EC 3.4.22.-) - clove pink (frag...   119  8e-27
gb|AAL60580.1|AF454958_1 senescence-associated cysteine protease...   119  1e-26
gb|AAK62661.1| F2G19.31/F2G19.31 [Arabidopsis thaliana] gi|19548...   119  1e-26
ref|NP_564497.1| cysteine proteinase RD21A [Arabidopsis thaliana...   119  1e-26
emb|CAE02828.1| OSJNBa0043A12.33 [Oryza sativa (japonica cultiva...   117  5e-26

>pir||S57776 cysteine proteinase (EC 3.4.22.-) - clove pink (fragment)
           gi|595986|gb|AAA79915.1| cysteine proteinase
          Length = 427

 Score =  119 bits (299), Expect = 8e-27
 Identities = 64/130 (49%), Positives = 79/130 (60%), Gaps = 10/130 (7%)
 Frame = +3

Query: 15  GSEEVPA----------AHQPVAVAIEAGRQVVPAVRCVCVYDDPTCGTSLNHGVLVVGY 164
           G E+VPA          AHQPV +AIEAG +     +        +CGTSL+HGV+ VGY
Sbjct: 205 GLEDVPANNEKALQKAVAHQPVRLAIEAGGRDFQLYKSGVFTG--SCGTSLDHGVVAVGY 262

Query: 165 GKDVTGSGSNYWIVKNSWGAEWGDAGYIRLKMGSTDAEGLCGIAMAPSYPVKTGPNPSTS 344
           G   T  G +YWIV+NSWG +WG+ GYIR++  +    G CGIA+ PSYPVKT PNP   
Sbjct: 263 G--TTDDGKDYWIVRNSWGDDWGEDGYIRMERNTESKSGKCGIAIEPSYPVKTSPNPPNP 320

Query: 345 GPIPCPSAKP 374
           GP P PS  P
Sbjct: 321 GPSP-PSPPP 329

>gb|AAL60580.1|AF454958_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 485

 Score =  119 bits (298), Expect = 1e-26
 Identities = 62/132 (46%), Positives = 78/132 (58%), Gaps = 14/132 (10%)
 Frame = +3

Query: 21  EEVPA----------AHQPVAVAIEAGRQVVPAVRCVCVYD----DPTCGTSLNHGVLVV 158
           E+VPA          +HQP++VAIE G       R   +YD    D  CGT L+HGV+ V
Sbjct: 244 EDVPANSEESLKKALSHQPISVAIEGGG------RAFQLYDSGIFDGICGTDLDHGVVAV 297

Query: 159 GYGKDVTGSGSNYWIVKNSWGAEWGDAGYIRLKMGSTDAEGLCGIAMAPSYPVKTGPNPS 338
           GYG   T +G +YWIVKNSWG  WG++GYIR++     + G CGIA+ PSYP+K G NP 
Sbjct: 298 GYG---TENGKDYWIVKNSWGTSWGESGYIRMERNIASSAGKCGIAVEPSYPIKNGQNPP 354

Query: 339 TSGPIPCPSAKP 374
             GP P    KP
Sbjct: 355 NPGPSPPSPVKP 366

>gb|AAK62661.1| F2G19.31/F2G19.31 [Arabidopsis thaliana] gi|19548039|gb|AAL87383.1|
           F2G19.31/F2G19.31 [Arabidopsis thaliana]
          Length = 462

 Score =  119 bits (297), Expect = 1e-26
 Identities = 57/117 (48%), Positives = 74/117 (62%), Gaps = 4/117 (3%)
 Frame = +3

Query: 36  AHQPVAVAIEAGRQVVPAVRCVCVYD----DPTCGTSLNHGVLVVGYGKDVTGSGSNYWI 203
           AHQP+++AIEAG       R   +YD    D +CGT L+HGV+ VGYG   T +G +YWI
Sbjct: 264 AHQPISIAIEAGG------RAFQLYDSGIFDGSCGTQLDHGVVAVGYG---TENGKDYWI 314

Query: 204 VKNSWGAEWGDAGYIRLKMGSTDAEGLCGIAMAPSYPVKTGPNPSTSGPIPCPSAKP 374
           V+NSWG  WG++GY+R+      + G CGIA+ PSYP+K G NP   GP P    KP
Sbjct: 315 VRNSWGKSWGESGYLRMARNIASSSGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKP 371

>ref|NP_564497.1| cysteine proteinase RD21A [Arabidopsis thaliana]
           gi|1172873|sp|P43297|RD21_ARATH Cysteine proteinase
           RD21a precursor (RD21) gi|541857|pir||JN0719
           drought-inducible cysteine proteinase (EC 3.4.22.-)
           RD21A precursor - Arabidopsis thaliana
           gi|435619|dbj|BAA02374.1| thiol protease [Arabidopsis
           thaliana] gi|12321010|gb|AAG50628.1|AC083835_13 cysteine
           protease, putative [Arabidopsis thaliana]
           gi|18175926|gb|AAL59952.1| putative cysteine proteinase
           RD21A [Arabidopsis thaliana] gi|22136972|gb|AAM91715.1|
           putative cysteine proteinase RD21A [Arabidopsis
           thaliana]
          Length = 462

 Score =  119 bits (297), Expect = 1e-26
 Identities = 57/117 (48%), Positives = 74/117 (62%), Gaps = 4/117 (3%)
 Frame = +3

Query: 36  AHQPVAVAIEAGRQVVPAVRCVCVYD----DPTCGTSLNHGVLVVGYGKDVTGSGSNYWI 203
           AHQP+++AIEAG       R   +YD    D +CGT L+HGV+ VGYG   T +G +YWI
Sbjct: 264 AHQPISIAIEAGG------RAFQLYDSGIFDGSCGTQLDHGVVAVGYG---TENGKDYWI 314

Query: 204 VKNSWGAEWGDAGYIRLKMGSTDAEGLCGIAMAPSYPVKTGPNPSTSGPIPCPSAKP 374
           V+NSWG  WG++GY+R+      + G CGIA+ PSYP+K G NP   GP P    KP
Sbjct: 315 VRNSWGKSWGESGYLRMARNIASSSGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKP 371

>emb|CAE02828.1| OSJNBa0043A12.33 [Oryza sativa (japonica cultivar-group)]
          Length = 466

 Score =  117 bits (292), Expect = 5e-26
 Identities = 62/131 (47%), Positives = 78/131 (59%), Gaps = 14/131 (10%)
 Frame = +3

Query: 15  GSEEVP----------AAHQPVAVAIEAGRQVVPAVRCVCVYDDPT----CGTSLNHGVL 152
           G E+VP           AHQPV+VAI+AG +         +YD       CGT+L+HGV+
Sbjct: 267 GFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQ------LYDSGVFTGRCGTNLDHGVV 320

Query: 153 VVGYGKDVTGSGSNYWIVKNSWGAEWGDAGYIRLKMGSTDAEGLCGIAMAPSYPVKTGPN 332
            VGYG D   +G+ YW V+NSWG +WG+ GYIR++   T   G CGIAM  SYP+K GPN
Sbjct: 321 AVGYGTDAA-TGAAYWTVRNSWGPDWGENGYIRMERNVTARTGKCGIAMMASYPIKKGPN 379

Query: 333 PSTSGPIPCPS 365
           P  S P P PS
Sbjct: 380 PKPSPPSPAPS 390



EST assemble image


clone accession position
1 MX023d08_r BP087035 1 314
2 MXL010g11_r BP093606 125 344
3 CM050e01_r AV389739 183 390




Chlamydomonas reinhardtii
Kazusa DNA Research Institute