KCC001446A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC001446A_C01 KCC001446A_c01
GCACGAGGGGACACTTACGGGTGCCGCGCAACCGCAGCACCCAACGCCCAACACTGATCT
CTCATGTACAAGAAGACAAGAGACAGCCTCATCCTTTTACAGCCGCGACAGCGGCGCTAC
TTCCAATTCTGTCAGCGTCGACTCATTTCGCGCCAGATGTCAGCGCGTCCGGCCGGCGGC
GGCGATTGTCGAGGACGTCCCGTCCTCCCCAGTCTGTTGCCGCGGCCACCGGCGCGTCAC
TCGTGACCCATGGCAGCACCTTCGTCATCAATATCACCTAGAAGTTGCAGGTGCACGGGC
ATTAAGTTTTGCTGATTCTTTACATATATAGATGTGGTCCCGCTGACGCAGTGCATGCGG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAG
TGTGTGTG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001446A_C01 KCC001446A_c01
(428 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_062289.1| nuclear localization signals binding protein 1 ... 62 1e-09
ref|XP_287566.1| hypothetical protein XP_287566 [Mus musculus] 62 2e-09
ref|XP_315306.1| ENSANGP00000024316 [Anopheles gambiae] gi|30176... 62 2e-09
ref|XP_317582.1| ENSANGP00000025094 [Anopheles gambiae] gi|30175... 62 2e-09
ref|XP_316923.1| ENSANGP00000023986 [Anopheles gambiae] gi|30175... 60 5e-09
>ref|NP_062289.1| nuclear localization signals binding protein 1 [Mus musculus]
gi|8493519|gb|AAB35286.2| nuclear localization signal
binding protein [Mus musculus]
Length = 143
Score = 62.4 bits (150), Expect = 1e-09
Identities = 25/31 (80%), Positives = 25/31 (80%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHTACTASAGP 335
THTHTHTHTHTHTHTHTHTHTHT S P
Sbjct: 64 THTHTHTHTHTHTHTHTHTHTHTHTPTSLLP 94
Score = 61.2 bits (147), Expect = 3e-09
Identities = 22/23 (95%), Positives = 23/23 (99%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTH 360
HTH+HTHTHTHTHTHTHTHTHTH
Sbjct: 63 HTHTHTHTHTHTHTHTHTHTHTH 85
Score = 61.2 bits (147), Expect = 3e-09
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTHRMHCVSGTTSIYVKNQQNLM 300
H H+HTHTHTHTHTHTHTHTHTH H + T+ + ++Q L+
Sbjct: 61 HIHTHTHTHTHTHTHTHTHTHTH-THTHTPTSLLPARSQAGLL 102
Score = 42.0 bits (97), Expect = 0.002
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = -3
Query: 414 HTHTHTHTHTHTHTHTHTPHALRQRDHIYICKESAKLNARAPA 286
H H HTHTHTHTHTHT H + ++ L AR+ A
Sbjct: 57 HICIHIHTHTHTHTHTHTHTHTHTHTHTHTHTPTSLLPARSQA 99
Score = 40.4 bits (93), Expect = 0.006
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -1
Query: 410 HTHTHTHTHTHTHTHTHRMHCVSGTTSIYVKNQQNLMPVHLQLLGDIDDEGAAMGHE*RA 231
H H HTHTHTHTHTH T + +L+P Q G + +G ++G + A
Sbjct: 57 HICIHIHTHTHTHTHTHTHTHTHTHTHTHTHTPTSLLPARSQ-AGLLCQKGDSLGPKALA 115
Query: 230 GGRGNRL-GRTGRP 192
+L GRP
Sbjct: 116 RASPRQLRSEPGRP 129
>ref|XP_287566.1| hypothetical protein XP_287566 [Mus musculus]
Length = 115
Score = 61.6 bits (148), Expect = 2e-09
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHT 359
THTHTHTHTHTHTHTHTHTHTHT
Sbjct: 89 THTHTHTHTHTHTHTHTHTHTHT 111
Score = 61.2 bits (147), Expect = 3e-09
Identities = 22/23 (95%), Positives = 23/23 (99%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTH 360
HTH+HTHTHTHTHTHTHTHTHTH
Sbjct: 88 HTHTHTHTHTHTHTHTHTHTHTH 110
Score = 58.2 bits (139), Expect = 3e-08
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTH 360
HT+ HTHTHTHTHTHTHTHTHTH
Sbjct: 84 HTYMHTHTHTHTHTHTHTHTHTH 106
Score = 58.2 bits (139), Expect = 3e-08
Identities = 21/27 (77%), Positives = 23/27 (84%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTHRMHC 348
+ H+HTHTHTHTHTHTHTHTHTH C
Sbjct: 86 YMHTHTHTHTHTHTHTHTHTHTHTHTC 112
Score = 57.0 bits (136), Expect = 6e-08
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHT 359
T+ HTHTHTHTHTHTHTHTHTHT
Sbjct: 85 TYMHTHTHTHTHTHTHTHTHTHT 107
Score = 57.0 bits (136), Expect = 6e-08
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHT 359
THT+ HTHTHTHTHTHTHTHTHT
Sbjct: 83 THTYMHTHTHTHTHTHTHTHTHT 105
Score = 56.6 bits (135), Expect = 8e-08
Identities = 20/23 (86%), Positives = 22/23 (94%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTH 360
HTH++ HTHTHTHTHTHTHTHTH
Sbjct: 82 HTHTYMHTHTHTHTHTHTHTHTH 104
Score = 54.7 bits (130), Expect = 3e-07
Identities = 20/23 (86%), Positives = 22/23 (94%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHT 359
THTHTHTHTHTHT+THTHT+ HT
Sbjct: 61 THTHTHTHTHTHTYTHTHTYMHT 83
Score = 54.7 bits (130), Expect = 3e-07
Identities = 20/23 (86%), Positives = 22/23 (94%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHT 359
THTHTHTHTHT+THTHT+ HTHT
Sbjct: 63 THTHTHTHTHTYTHTHTYMHTHT 85
Score = 54.3 bits (129), Expect = 4e-07
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTH 360
HTH+HTHTHTHT+THTHT+ HTH
Sbjct: 62 HTHTHTHTHTHTYTHTHTYMHTH 84
Score = 53.5 bits (127), Expect = 7e-07
Identities = 19/23 (82%), Positives = 21/23 (90%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTH 360
HT+ HTHT+ HTHTHTHTHTHTH
Sbjct: 78 HTYMHTHTYMHTHTHTHTHTHTH 100
Score = 52.4 bits (124), Expect = 1e-06
Identities = 19/23 (82%), Positives = 21/23 (90%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHT 359
THTHT+ HTHT+ HTHTHTHTHT
Sbjct: 75 THTHTYMHTHTYMHTHTHTHTHT 97
Score = 52.4 bits (124), Expect = 1e-06
Identities = 20/26 (76%), Positives = 24/26 (91%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTHRMH 351
HTH+HTHTHT+THTHT+ HTHT+ MH
Sbjct: 64 HTHTHTHTHTYTHTHTYMHTHTY-MH 88
Score = 52.4 bits (124), Expect = 1e-06
Identities = 19/23 (82%), Positives = 21/23 (90%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHT 359
THT+ HTHT+ HTHTHTHTHTHT
Sbjct: 77 THTYMHTHTYMHTHTHTHTHTHT 99
Score = 52.0 bits (123), Expect = 2e-06
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTH 360
HTH++ HTHT+ HTHTHTHTHTH
Sbjct: 76 HTHTYMHTHTYMHTHTHTHTHTH 98
Score = 49.7 bits (117), Expect = 9e-06
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = -3
Query: 426 HTLTHTHTHTHTHTHTHTHTHTPHALRQRDHIY 328
HT THTHTHTHT+THTHT+ HT + H +
Sbjct: 62 HTHTHTHTHTHTYTHTHTYMHTHTYMHTHTHTH 94
Score = 48.1 bits (113), Expect = 3e-05
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -1
Query: 419 SHTHTHTHTHTHTHTHTHTH 360
S THTHTHTHTHTHT+THTH
Sbjct: 59 STTHTHTHTHTHTHTYTHTH 78
Score = 44.7 bits (104), Expect = 3e-04
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = -3
Query: 420 LTHTHTHTHTHTHTHTHTHT 361
++ THTHTHTHTHTHT+THT
Sbjct: 58 ISTTHTHTHTHTHTHTYTHT 77
Score = 42.4 bits (98), Expect = 0.002
Identities = 17/27 (62%), Positives = 18/27 (65%)
Frame = -2
Query: 403 THTHTHTHTHTHTHTACTASAGPHLYM 323
THTHTHTHTHTHT+T H YM
Sbjct: 61 THTHTHTHTHTHTYTHTHTYMHTHTYM 87
Score = 41.2 bits (95), Expect = 0.003
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -3
Query: 405 THTHTHTHTHTHTHTPHALRQRDHIYI 325
THTHTHTHTHTHT+T H Y+
Sbjct: 61 THTHTHTHTHTHTYTHTHTYMHTHTYM 87
>ref|XP_315306.1| ENSANGP00000024316 [Anopheles gambiae] gi|30176169|gb|EAA44288.1|
ENSANGP00000024316 [Anopheles gambiae str. PEST]
Length = 258
Score = 61.6 bits (148), Expect = 2e-09
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHT 359
THTHTHTHTHTHTHTHTHTHTHT
Sbjct: 90 THTHTHTHTHTHTHTHTHTHTHT 112
Score = 60.1 bits (144), Expect = 7e-09
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHTACTASAGPHL 329
T+THTHTHTHTHTHTHTHTHTHT A +L
Sbjct: 88 TYTHTHTHTHTHTHTHTHTHTHTHTQAPTNIYL 120
Score = 57.4 bits (137), Expect = 5e-08
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -2
Query: 421 THTHTHTHTHTHTHTHTHTHTACTASAGPHLYM 323
T+THTHTHTHTHTHTHTHTHT A ++Y+
Sbjct: 88 TYTHTHTHTHTHTHTHTHTHTHTHTQAPTNIYL 120
Score = 54.7 bits (130), Expect = 3e-07
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = -3
Query: 423 TLTHTHTHTHTHTHTHTHTHTPHALRQRDHIYI 325
T THTHTHTHTHTHTHTHTHT + +IY+
Sbjct: 88 TYTHTHTHTHTHTHTHTHTHTHTHTQAPTNIYL 120
Score = 54.3 bits (129), Expect = 4e-07
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = -1
Query: 419 SHTHTHTHTHTHTHTHTHTHRMHCVSGTTSIYV 321
++THTHTHTHTHTHTHTHTH T+IY+
Sbjct: 88 TYTHTHTHTHTHTHTHTHTHTHTHTQAPTNIYL 120
Score = 45.4 bits (106), Expect = 2e-04
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTHRMHCVSGTTSIYV 321
HTH+HTHTHTHTHTHT T+ + + + S+++
Sbjct: 97 HTHTHTHTHTHTHTHTQAPTNIYLLFTLHLHFSLHI 132
>ref|XP_317582.1| ENSANGP00000025094 [Anopheles gambiae] gi|30175475|gb|EAA43936.1|
ENSANGP00000025094 [Anopheles gambiae str. PEST]
Length = 137
Score = 61.6 bits (148), Expect = 2e-09
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHT 359
THTHTHTHTHTHTHTHTHTHTHT
Sbjct: 63 THTHTHTHTHTHTHTHTHTHTHT 85
Score = 61.2 bits (147), Expect = 3e-09
Identities = 22/23 (95%), Positives = 23/23 (99%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTH 360
HTH+HTHTHTHTHTHTHTHTHTH
Sbjct: 62 HTHTHTHTHTHTHTHTHTHTHTH 84
Score = 59.7 bits (143), Expect = 9e-09
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTHRM 354
HTH+HTHTHTHTHTHTHTHTHT ++
Sbjct: 64 HTHTHTHTHTHTHTHTHTHTHTQKL 88
Score = 51.2 bits (121), Expect = 3e-06
Identities = 18/22 (81%), Positives = 21/22 (94%)
Frame = -3
Query: 426 HTLTHTHTHTHTHTHTHTHTHT 361
+++ HTHTHTHTHTHTHTHTHT
Sbjct: 58 YSIQHTHTHTHTHTHTHTHTHT 79
Score = 50.8 bits (120), Expect = 4e-06
Identities = 21/29 (72%), Positives = 21/29 (72%)
Frame = -3
Query: 426 HTLTHTHTHTHTHTHTHTHTHTPHALRQR 340
HT THTHTHTHTHTHTHTHT R R
Sbjct: 66 HTHTHTHTHTHTHTHTHTHTQKLKIKRAR 94
Score = 49.3 bits (116), Expect = 1e-05
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = -1
Query: 422 HSHTHTHTHTHTHTHTHTHTHRMHCVSGTTSIYVK 318
+S HTHTHTHTHTHTHTHTH H + T + +K
Sbjct: 58 YSIQHTHTHTHTHTHTHTHTH-THTHTHTQKLKIK 91
Score = 40.4 bits (93), Expect = 0.006
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -3
Query: 423 TLTHTHTHTHTHTHTHTHTHT 361
+L ++ HTHTHTHTHTHTHT
Sbjct: 55 SLFYSIQHTHTHTHTHTHTHT 75
Score = 38.5 bits (88), Expect = 0.022
Identities = 17/43 (39%), Positives = 23/43 (52%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTHRMHCVSGTTSIYVKNQQNLM 300
HTH+HTHTHTHTHT R ++I V+ ++ M
Sbjct: 72 HTHTHTHTHTHTHTQKLKIKRARRSEEALQKSAIKVRRKRKWM 114
Score = 35.8 bits (81), Expect = 0.14
Identities = 16/35 (45%), Positives = 18/35 (50%)
Frame = -3
Query: 396 HTHTHTHTHTHTPHALRQRDHIYICKESAKLNARA 292
HTHTHTHTHTHT H + K K R+
Sbjct: 62 HTHTHTHTHTHTHTHTHTHTHTHTQKLKIKRARRS 96
>ref|XP_316923.1| ENSANGP00000023986 [Anopheles gambiae] gi|30175226|gb|EAA12549.2|
ENSANGP00000023986 [Anopheles gambiae str. PEST]
Length = 123
Score = 60.5 bits (145), Expect = 5e-09
Identities = 24/33 (72%), Positives = 24/33 (72%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHTACTASAGPHL 329
THTHTHTHTHTHTH HTHTHTHT HL
Sbjct: 61 THTHTHTHTHTHTHIHTHTHTHTHTHTHTHTHL 93
Score = 60.1 bits (144), Expect = 7e-09
Identities = 23/35 (65%), Positives = 25/35 (70%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHTACTASAGPHLYM 323
THTHTHTHTHTHTHTH HTHTHT H ++
Sbjct: 59 THTHTHTHTHTHTHTHIHTHTHTHTHTHTHTHTHL 93
Score = 59.7 bits (143), Expect = 9e-09
Identities = 23/38 (60%), Positives = 27/38 (70%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTHRMHCVSGTTSIYVKN 315
HTH+H HTHTHTHTHTHTHTHTH +S + +N
Sbjct: 70 HTHTHIHTHTHTHTHTHTHTHTHLKLPLSALSKYIARN 107
Score = 57.4 bits (137), Expect = 5e-08
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTH 360
HTH+HT THTHTHTHTHTHTHTH
Sbjct: 52 HTHTHTPTHTHTHTHTHTHTHTH 74
Score = 55.5 bits (132), Expect = 2e-07
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHT 359
T THTHTHTHTHTHTHTH HTHT
Sbjct: 57 TPTHTHTHTHTHTHTHTHIHTHT 79
Score = 55.5 bits (132), Expect = 2e-07
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -2
Query: 427 THTHTHTHTHTHTHTHTHTHTHT 359
THT THTHTHTHTHTHTHTH HT
Sbjct: 55 THTPTHTHTHTHTHTHTHTHIHT 77
Score = 55.1 bits (131), Expect = 2e-07
Identities = 20/23 (86%), Positives = 21/23 (90%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTH 360
HT +HTHTHTHTHTHTHTH HTH
Sbjct: 56 HTPTHTHTHTHTHTHTHTHIHTH 78
Score = 55.1 bits (131), Expect = 2e-07
Identities = 20/23 (86%), Positives = 21/23 (90%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTH 360
H H+HTHT THTHTHTHTHTHTH
Sbjct: 50 HIHTHTHTPTHTHTHTHTHTHTH 72
Score = 55.1 bits (131), Expect = 2e-07
Identities = 20/23 (86%), Positives = 21/23 (90%)
Frame = -1
Query: 428 HTHSHTHTHTHTHTHTHTHTHTH 360
HTH+ THTHTHTHTHTHTHTH H
Sbjct: 54 HTHTPTHTHTHTHTHTHTHTHIH 76
Score = 50.4 bits (119), Expect = 6e-06
Identities = 20/33 (60%), Positives = 22/33 (66%)
Frame = -3
Query: 426 HTLTHTHTHTHTHTHTHTHTHTPHALRQRDHIY 328
H THTHT THTHTHTHTHTHT + H +
Sbjct: 50 HIHTHTHTPTHTHTHTHTHTHTHTHIHTHTHTH 82
Score = 39.7 bits (91), Expect = 0.010
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -2
Query: 406 HTHTHTHTHTHTHTHTACTASAGPHLY 326
H HTHTHT THTHTHT H++
Sbjct: 50 HIHTHTHTPTHTHTHTHTHTHTHTHIH 76
Score = 33.9 bits (76), Expect = 0.53
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 400 HTHTHTHTHTHTHTACTASAGPHLYM 323
H HTHTHT THTHT H ++
Sbjct: 50 HIHTHTHTPTHTHTHTHTHTHTHTHI 75
EST assemble image
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clone |
accession |
position |
| 1 |
CM049h01_r |
AV389647 |
1 |
365 |
| 2 |
CM072c02_r |
AV391460 |
1 |
428 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute