>KCC001444A_C01 KCC001444A_c01
gcaccaggcctCACAAACCCACACAATACACGCACTTACGAGCAGTCAAAGCACACAAGG
CCTGTAACTCACGAGTCGAGCTCTCCAAGAATTCAAGGAACAATGGCGACGACTGCCTCT
TCCTCTGGTCTCCGCACTTCTGCTATGGACATCCAGATGCCGGCAGCTCTGCGCTGCAAC
ACGGCCACCACGCAAAAGCCCGCCCAGTCGTCGCAAACAGCGGCCGATTCCTTCTGCTTC
TATGCCACGAGTCCCACTGCCGTGGCCTTCTATGATTTCTCGTGCAACAACAACACCAAC
AGCAACATTCGCTCGGGGTCCTGCGGAGGCGCGGTCGGGAGTGGTGCGTCATTCTTCGCT
AAGCTCTGGGGCGCCTCGCACTAAGCGGCCAGCACGGCATCCCGACTCGATACTGGGCTT
ATGGTACGGACGTTATAATGACTCACGAAACCGCGGACGCCGGAAGTGAGAGCCCGTCGT
GTGGACACGTTCCGGGCGTGGCGGCTGACGACGGCGACAGCAGGGCAGGCCCCCAGGGCC
CTCTGCGCAGGACATTCTGGAACTGGATATCTGGTTGC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001444A_C01 KCC001444A_c01
         (578 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_630516.1| hypothetical protein [Streptomyces coelicolor A...    42  0.008
pir||E86185 hypothetical protein [imported] - Arabidopsis thalia...    40  0.018
dbj|BAC87637.1| unnamed protein product [Homo sapiens]                 40  0.023
ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) ...    40  0.031
gb|AAD13020.1| DNA binding protein Ncp1 [Ustilago maydis]              40  0.031

>ref|NP_630516.1| hypothetical protein [Streptomyces coelicolor A3(2)]
           gi|7479288|pir||T28700 hypothetical protein -
           Streptomyces coelicolor gi|3127851|emb|CAA18917.1|
           hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 630

 Score = 41.6 bits (96), Expect = 0.008
 Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
 Frame = +2

Query: 185 PPRKSPPSRRKQRPIPSASMPRVPLPWPSMISR---ATTTPTATFARGPAEARSGVVRHS 355
           P  K P S       P+A  P + +P+P   +R       P  T A GPAEA +G   H 
Sbjct: 525 PAHKPPVSGVPALEAPAAETPALEVPYPDTPARTGAGVDGPAGTAADGPAEAAAGQPDH- 583

Query: 356 SLSSGAPRTKRPARHPD 406
             + GA RT RP  HPD
Sbjct: 584 --TPGAARTGRP--HPD 596

>pir||E86185 hypothetical protein [imported] - Arabidopsis thaliana
           gi|2388584|gb|AAB71465.1| EST gb|ATTS1136 comes from
           this gene. [Arabidopsis thaliana]
          Length = 402

 Score = 40.4 bits (93), Expect = 0.018
 Identities = 47/184 (25%), Positives = 71/184 (38%)
 Frame = +1

Query: 13  TNPHNTRTYEQSKHTRPVTHESSSPRIQGTMATTASSSGLRTSAMDIQMPAALRCNTATT 192
           +NP+   +   S +T  V   SSS     T AT  SSSG    +      A +  +T  T
Sbjct: 29  SNPNADASSMPSTNTTTVPQTSSSSTSSTTTAT-ESSSGTTAESSSSTKSATMSGSTTHT 87

Query: 193 QKPAQSSQTAADSFCFYATSPTAVAFYDFSCNNNTNSNIRSGSCGGAVGSGASFFAKLWG 372
              A +S TA+ S   Y+TS +  +    +   +T S   S     A  S AS     + 
Sbjct: 88  TSSATASSTASTSTSSYSTSYSTSSTKTTTMTGSTISTTAS----AAPTSTASTSTSSYS 143

Query: 373 ASH*AASTASRLDTGLMVRTL**LTKPRTPEVRARRVDTFRAWRLTTATAGQAPRALCAG 552
            S+  +ST +   TG  + T    T    P   +       A   T  ++G  P A+   
Sbjct: 144 TSYSTSSTKTTTVTGSTIGT----TASAAPTSTSTSTANSSASSTTNPSSGSKPTAMTGT 199

Query: 553 HSGT 564
            + T
Sbjct: 200 TANT 203

>dbj|BAC87637.1| unnamed protein product [Homo sapiens]
          Length = 286

 Score = 40.0 bits (92), Expect = 0.023
 Identities = 25/76 (32%), Positives = 35/76 (45%), Gaps = 1/76 (1%)
 Frame = +2

Query: 179 TRPPRKSPPSRRKQRPIPSASMPRV-PLPWPSMISRATTTPTATFARGPAEARSGVVRHS 355
           TRPP ++ P+R   R  P+ + PR  P   P   S   T P A+  R P  A    +  +
Sbjct: 28  TRPPTRASPTRMPPRASPTRTPPRASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPT 87

Query: 356 SLSSGAPRTKRPARHP 403
           +  +  P T  PAR P
Sbjct: 88  APPTRTPPTASPARTP 103

 Score = 34.7 bits (78), Expect = 0.98
 Identities = 25/73 (34%), Positives = 30/73 (40%)
 Frame = +2

Query: 185 PPRKSPPSRRKQRPIPSASMPRVPLPWPSMISRATTTPTATFARGPAEARSGVVRHSSLS 364
           PP + PP+    R  P+AS    P   P   S A T PTA+ AR P  A        +  
Sbjct: 80  PPTRMPPTAPPTRTPPTAS----PARTPPTESPARTPPTASPARTPPRASPTRTPPRASP 135

Query: 365 SGAPRTKRPARHP 403
              P T  P R P
Sbjct: 136 RRTPSTASPTRTP 148

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 23/72 (31%), Positives = 29/72 (39%)
 Frame = +2

Query: 188 PRKSPPSRRKQRPIPSASMPRVPLPWPSMISRATTTPTATFARGPAEARSGVVRHSSLSS 367
           PR++PP    +R  P AS+ R P   P      T  PT T    P  A       +   +
Sbjct: 54  PRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRT----PPTASPARTPPTESPA 109

Query: 368 GAPRTKRPARHP 403
             P T  PAR P
Sbjct: 110 RTPPTASPARTP 121

>ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) (rsr-1)
           [Caenorhabditis elegans] gi|19571645|emb|CAB04214.3| C.
           elegans RSR-1 protein (corresponding sequence F28D9.1)
           [Caenorhabditis elegans]
          Length = 601

 Score = 39.7 bits (91), Expect = 0.031
 Identities = 34/122 (27%), Positives = 52/122 (41%), Gaps = 1/122 (0%)
 Frame = +2

Query: 185 PPRKSPPSRRKQRPIPSASMPRVPLPWPSMISRATTTPTATFARGPAEARSGVVRHSSLS 364
           P R+ PP+RR++ P  S S P          SR+ + P     R P++++S   R     
Sbjct: 402 PKREIPPARRRRSPSASKSPPAP----KRAKSRSKSPPAPRRRRSPSQSKSPAPRRRRSP 457

Query: 365 SGAPRTKRPARHPDSILGLWYGRYNDSRNRG-RRK*EPVVWTRSGRGG*RRRQQGRPPGP 541
           S +P+  R  R P           + S++R  RR+  P    R  +   RRR   R   P
Sbjct: 458 SKSPQAPRRRRSP-----------SGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSP 506

Query: 542 SA 547
           S+
Sbjct: 507 SS 508

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
 Frame = +2

Query: 194 KSPPSRRKQRPIPSASMPRVPLPWPSMISRATTTPTATFARGPAEARSGVV---RHSSLS 364
           KSPP+  ++R  PSAS  + P P P      + +P A   R P+ ++S      R S   
Sbjct: 339 KSPPAPARRRRSPSAS--KSPPPAPKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSK 396

Query: 365 SGAPRTKR---PAR 397
           S +P  KR   PAR
Sbjct: 397 SRSPAPKREIPPAR 410

>gb|AAD13020.1| DNA binding protein Ncp1 [Ustilago maydis]
          Length = 400

 Score = 39.7 bits (91), Expect = 0.031
 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
 Frame = +1

Query: 1   APGLTNPHNT--RTYEQSKHTRPVTHESSSPRIQGT---MATTASSSGLR-TSAMDIQMP 162
           APGL  P  T  +  + + H R V+H +++    G     AT A  S +  TSA+    P
Sbjct: 125 APGLVQPQTTAIQPVQPNDHAREVSHINTAVPAAGVGAAAATAAPGSAVEPTSAVSAVAP 184

Query: 163 AALRCNTATTQKPAQSSQTAADSFCFYATSPTAVAFYDFSCNNNTNSNIRSGSCGGAVGS 342
           +    +  + Q+P Q +  A+        SPTA     F       S++     G   G+
Sbjct: 185 STAPGSAISAQQPQQLNAVAS--------SPTAAGAPSFPPGTIVPSSVTGAGAGAGAGA 236

Query: 343 GA 348
           GA
Sbjct: 237 GA 238

EST assemble image

clone accession position 1 CM060c01_r AV390731 1 578 2 CM049e09_r AV389657 12 413 3 HC086e04_r AV638446 43 444 4 CM096b01_r AV392755 96 521

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