Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001443A_C01 KCC001443A_c01
(538 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC16680.1| hypothetical protein [Oryza sativa (japonica cul... 43 0.002
ref|ZP_00040246.1| COG0598: Mg2+ and Co2+ transporters [Xylella ... 42 0.007
gb|AAK82442.1|AC091247_9 hypothetical protein [Oryza sativa] 41 0.011
gb|AAF64757.1|AF225387_1 gag polyprotein [Phasianus colchicus] 41 0.011
ref|NP_864704.1| 30S ribosomal protein S1 [Pirellula sp.] gi|323... 40 0.019
>dbj|BAC16680.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 117
Score = 43.1 bits (100), Expect = 0.002
Identities = 32/71 (45%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = -3
Query: 491 GSMAVMRPATR--AVQVGDG---AGGLPSPRRGGAKCPPVRTQPRAASGPPPTSTGLSGG 327
G RPATR A+ VG G GGLPSP G PP R+ A GPPP S G
Sbjct: 20 GGQERRRPATRTPAMMVGAGMGDGGGLPSPGSAGGYPPPPRS---AGGGPPPPG---SAG 73
Query: 326 GHDGLAVAHGG 294
GH L GG
Sbjct: 74 GHPTLPRFAGG 84
>ref|ZP_00040246.1| COG0598: Mg2+ and Co2+ transporters [Xylella fastidiosa Ann-1]
Length = 548
Score = 41.6 bits (96), Expect = 0.007
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 193 NTRHPSEAAAATLPARRLQRLQTTLGHPANSSTRPPCATARPS*PPPE-RPVLVGGGPLA 369
N HP+ LP L P +S+T P T P+ P P P+LV P
Sbjct: 47 NPDHPTPPPHQPLPTPPPPPLDVVAPWPWHSNTDTPTRTTPPTPPDPTGTPILVDLHPRR 106
Query: 370 ARGCVLTGGHLAPPRLGLGKPPAPSPT 450
+ G H P RLG +PP P PT
Sbjct: 107 TPPHLPVGLHHPPGRLGQPQPPPPQPT 133
>gb|AAK82442.1|AC091247_9 hypothetical protein [Oryza sativa]
Length = 323
Score = 40.8 bits (94), Expect = 0.011
Identities = 34/111 (30%), Positives = 44/111 (39%), Gaps = 14/111 (12%)
Frame = +1
Query: 202 HPSEAAAATLPARRLQRLQ--------TTLGHPANSSTRPPCATARPS*PPPERPVLVGG 357
HP+EA ++ ARR RL P +SS + R + PP+ P V
Sbjct: 56 HPAEAGPSSTNARRSSRLAGAPPATPGAAAAAPTSSSPTAARRSNRLAGAPPDPPAAVAA 115
Query: 358 GPL------AARGCVLTGGHLAPPRLGLGKPPAPSPTCTARVAGRITAIEP 492
P A R L G PP P +PSPT TAR + R+ P
Sbjct: 116 PPTSSSPTTAMRSNRLAGAPSDPPAAATAGPTSPSPT-TARRSNRLAGAPP 165
>gb|AAF64757.1|AF225387_1 gag polyprotein [Phasianus colchicus]
Length = 246
Score = 40.8 bits (94), Expect = 0.011
Identities = 35/108 (32%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Frame = +1
Query: 256 QTTLGHPANSSTRPPCATARPS*PPPE-----RPVLVG-GGPLAARGCVLTGGHLAPP-- 411
+TT +P + T CATA PS PPP P L G GGP G PP
Sbjct: 139 KTTSCYPCRTGTGCSCATAAPSAPPPYGGSGLYPSLEGLGGPEGEGVATSLAGRDGPPRG 198
Query: 412 ---RLGLGKP---PAPSPTCTARVAGRITAIEPAVACTPLHARVVGRA 537
R G P P P+ T R+ +T P+V P+ + G A
Sbjct: 199 VEQRAEPGCPDSAPGPALTDWVRIREELTTAAPSVVAMPVVVKTEGSA 246
>ref|NP_864704.1| 30S ribosomal protein S1 [Pirellula sp.]
gi|32397082|emb|CAD72386.1| 30S ribosomal protein S1
[Pirellula sp.]
Length = 560
Score = 40.0 bits (92), Expect = 0.019
Identities = 31/95 (32%), Positives = 42/95 (43%), Gaps = 7/95 (7%)
Frame = +1
Query: 208 SEAAAATLPARRLQRLQTTLGHPANSSTRPPCATARPS*PPPERPVL-------VGGGPL 366
S+A A A Q Q + PA S++ P A+PS P P P +GGGPL
Sbjct: 17 SDAPAPEASAEATQASQESA--PAESASPAPAEQAKPSSPKPTGPKKNKAPLPRIGGGPL 74
Query: 367 AARGCVLTGGHLAPPRLGLGKPPAPSPTCTARVAG 471
AARG G+ KP +P+ T ++ G
Sbjct: 75 AARG------------QGVAKPVSPAAVSTEQLEG 97
