Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001435A_C01 KCC001435A_c01
(419 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00091205.1| COG0542: ATPases with chaperone activity, ATP... 45 2e-04
dbj|BAB89660.1| hypothetical protein [Oryza sativa (japonica cul... 43 0.001
gb|AAK53449.1| unknown [Streptomyces aureofaciens] 43 0.001
ref|ZP_00141327.1| COG4674: Uncharacterized ABC-type transport s... 42 0.002
ref|NP_626836.1| conserved hypothetical protein SCC88.10c [Strep... 42 0.003
>ref|ZP_00091205.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Azotobacter vinelandii]
Length = 1082
Score = 45.1 bits (105), Expect = 2e-04
Identities = 40/122 (32%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Frame = -2
Query: 382 PCQRPALRHLAGEQ*VAVQEARAQAAEQQSAGSPESCSWPHPSTPRRPRQQVPRLLPSRR 203
PC RP LR A + + A Q A +PE P R R++ P L R
Sbjct: 36 PC-RPGLRGAAEQPGTRSVARPDRLAAQGPARAPEPAGRGDPRPRRAVRRRPP--LAGRL 92
Query: 202 KRARPGPEPRAATSRALPGEPVAHPGGPGE--EQSSP*CKTSARRMCREGSCTREQR-PS 32
+R RP P A RALPG HP G + SP + +RR R R +R P
Sbjct: 93 RRRRPPAFPPAGAGRALPGRLAPHPAGRSQHPRSRSPQPEPGSRRRGRYPDLGRARRHPP 152
Query: 31 EP 26
+P
Sbjct: 153 DP 154
>dbj|BAB89660.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|20805216|dbj|BAB92883.1| OSJNBa0093F16.3 [Oryza
sativa (japonica cultivar-group)]
Length = 244
Score = 42.7 bits (99), Expect = 0.001
Identities = 34/111 (30%), Positives = 48/111 (42%), Gaps = 4/111 (3%)
Frame = -2
Query: 361 RHLAGEQ*VAVQEARAQAAEQQSAGSPESCSWPHPSTPRRPRQQVPRLLPSRRKRARPGP 182
RHLAG + ++ +A A+ E++ G PH P RP PSRR+R P P
Sbjct: 8 RHLAGNRHPSLTKAAAEEEEEEEEGG----GIPHAPRPPRP--------PSRRRRPSPSP 55
Query: 181 E----PRAATSRALPGEPVAHPGGPGEEQSSP*CKTSARRMCREGSCTREQ 41
+AT A P PG GE+Q + RR C+ +E+
Sbjct: 56 AAMGCAASATDSAERRRPGRSPGHDGEQQQQ---QDGRRRGCKVAPEPKEE 103
>gb|AAK53449.1| unknown [Streptomyces aureofaciens]
Length = 579
Score = 42.7 bits (99), Expect = 0.001
Identities = 37/107 (34%), Positives = 42/107 (38%), Gaps = 8/107 (7%)
Frame = +3
Query: 117 PGPPGCATGSPGSARDVAALGSGPGRARFLREGSSRGTCCRGRRGVEG*GQEQDSGLPAL 296
P G TG G A S PGRAR +R SR CCRG GVE G +G
Sbjct: 333 PATTGPRTGPAGPAGPAGPRRSAPGRARRIRARGSRCRCCRG-AGVEPEGPANGAGAGRP 391
Query: 297 CCSAAWARASCTATHCSPARC--------RRAGRWQGRPRW*PASPP 413
++ +AR PAR RA R PASPP
Sbjct: 392 TATSGYARPQHAR---PPARAPPGPRPAPTRAASTPARTGSRPASPP 435
Score = 32.0 bits (71), Expect = 2.1
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = -2
Query: 319 RAQAAEQQSAGSPESCSWPHPSTPRRPRQQVPRLLPSRRKRARPGPEPRAATSRALPGEP 140
RA SA +P + + P P P RP ARP P PRAA PG
Sbjct: 515 RAPPPHHPSARNPSARATPRPRPPPRPSAA-----------ARPEPPPRAA-----PGPS 558
Query: 139 VAHPGGP-GEEQSSP 98
PG P G SP
Sbjct: 559 GTAPGPPSGPRSPSP 573
>ref|ZP_00141327.1| COG4674: Uncharacterized ABC-type transport system, ATPase
component [Pseudomonas aeruginosa UCBPP-PA14]
Length = 513
Score = 42.0 bits (97), Expect = 0.002
Identities = 40/136 (29%), Positives = 53/136 (38%)
Frame = -2
Query: 415 HGGLAGHQRGRPCQRPALRHLAGEQ*VAVQEARAQAAEQQSAGSPESCSWPHPSTPRRPR 236
H L H+ G P +RP RH + AR Q A + + G+ + PH + RR
Sbjct: 62 HSRLPDHRAGHP-RRPVPRHR--------RAARGQPAARLAPGAEQVRPGPHRAARRREP 112
Query: 235 QQVPRLLPSRRKRARPGPEPRAATSRALPGEPVAHPGGPGEEQSSP*CKTSARRMCREGS 56
V RL P+R + R PE A R V GG + Q R R G
Sbjct: 113 PDVLRLRPARLQALRLDPERGALRPRR---RAVRAAGGDHQPQRD--VADQLHRSRRLGR 167
Query: 55 CTREQRPSEPLCATRR 8
R + P+ P RR
Sbjct: 168 PRRTRHPARPAARRRR 183
>ref|NP_626836.1| conserved hypothetical protein SCC88.10c [Streptomyces coelicolor
A3(2)] gi|6983741|emb|CAB75380.1| conserved hypothetical
protein SCC88.10c [Streptomyces coelicolor A3(2)]
Length = 1340
Score = 41.6 bits (96), Expect = 0.003
Identities = 39/138 (28%), Positives = 51/138 (36%), Gaps = 8/138 (5%)
Frame = -2
Query: 406 LAGHQRGRPCQRPALRHLAGEQ*VAVQEARAQAAEQQSAGSPESCSWPHPSTPRRPRQQV 227
L +R R RPA G + A A A A ++A +PE P P+ P RPR++
Sbjct: 25 LPPRRRRRAASRPAGPPSGGSEAPAETVAPAGTAPAEAAEAPEPA--PEPAAPARPRRRA 82
Query: 226 PRLLPSRRKRARPGPEPRAATSRALPGEPVAHPGGPGEEQSSP*CKTSA--------RRM 71
R R PE A + P A P EE + T + RR
Sbjct: 83 VR----RASAPAGAPEAAEAAETVVSAAPAAETPVPAEETTESVAATESAAPKGRTRRRA 138
Query: 70 CREGSCTREQRPSEPLCA 17
R + E SEP A
Sbjct: 139 TRSVTSAAEPTVSEPAAA 156
Score = 30.8 bits (68), Expect = 4.6
Identities = 32/101 (31%), Positives = 39/101 (37%)
Frame = -1
Query: 410 RACWSPARAALPAARSPAPCW*TVSSRTGSPRPGRRTAERWKPRILLLASSFDTTAAAAA 231
RA R A +PA + +P+ R A + F T AAA
Sbjct: 253 RARRRSTRKAATGFAAPAQTAAAAADEAEAPKRPSRPAVAVFQAPVFAEPQFQTPERAAA 312
Query: 230 GASAAAFSEKARTAWP*AESSDVAGAPWRASSAPRRTRRGA 108
A+A A A TA P ES A A+S RR RRGA
Sbjct: 313 EAAAEAAG--AETAKPAEESVGAAPEEQSAASRRRRKRRGA 351
