Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001434A_C01 KCC001434A_c01
(434 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P25283|MTG2_HAEGA Modification methylase HgaIB (Cytosine-spec... 33 0.90
pir||T01932 RNA binding protein homolog - common tobacco (fragme... 33 1.2
gb|AAQ82687.1| Epa5p [Candida glabrata] 32 2.6
gb|AAC28786.1| G-protein-coupled 5-hydroxytryptamine receptor [A... 32 2.6
emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia] 31 3.4
>sp|P25283|MTG2_HAEGA Modification methylase HgaIB (Cytosine-specific methyltransferase
HgaIB) (M.HgaIB) (M.HgaI-2) gi|97187|pir||A39467
site-specific DNA-methyltransferase (cytosine-specific)
(EC 2.1.1.73) HgaI 2 [validated] - Haemophilus
paragallinarum gi|216712|dbj|BAA14378.1| HgaI methylase
[Haemophilus paragallinarum] gi|435624|dbj|BAA04207.1|
HgaI methylase 2 [Haemophilus paragallinarum]
gi|1090539|prf||2019268B HgaI restriction
methylase:ISOTYPE=2
Length = 358
Score = 33.1 bits (74), Expect = 0.90
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 343 TTTAGSRPDSVFFPPPSSADCVEASARTLVTAPLDPCVISAICFPSYEPLS 191
T S +++ FPP SS E RT++ + P ++SAICFP E ++
Sbjct: 310 TFIVSSIDENIEFPPGSS----ETYIRTIIGEAIPPKLLSAICFPDGENIN 356
>pir||T01932 RNA binding protein homolog - common tobacco (fragment)
gi|2708532|gb|AAB92518.1| putative RNA binding protein
[Nicotiana tabacum]
Length = 482
Score = 32.7 bits (73), Expect = 1.2
Identities = 19/64 (29%), Positives = 31/64 (47%)
Frame = +3
Query: 132 QSCGITQSRKQESASELSTCDSGS*LGKQIADMTQGSNGAVTNVRADASTQSADDGGGKK 311
+ CG Q + SA E SG+ +GKQ ++ G + A +RAD+ +Q G++
Sbjct: 384 KGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRADSGSQWNGGYNGRQ 443
Query: 312 TESG 323
G
Sbjct: 444 NYGG 447
>gb|AAQ82687.1| Epa5p [Candida glabrata]
Length = 1218
Score = 31.6 bits (70), Expect = 2.6
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +1
Query: 205 SSGSKSPI*RKGPTGPSPMCALTLQHNRLMTGAERKPSPVGFQRSWCTMTSSTWHSFSGS 384
SS S S + PSP + + + + + PSP S + +SS+ S S S
Sbjct: 360 SSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSS 419
Query: 385 TSQTSSSCTRGGTS 426
+S +SSS + +S
Sbjct: 420 SSSSSSSSSSSSSS 433
>gb|AAC28786.1| G-protein-coupled 5-hydroxytryptamine receptor [Aplysia
californica]
Length = 492
Score = 31.6 bits (70), Expect = 2.6
Identities = 23/80 (28%), Positives = 36/80 (44%), Gaps = 1/80 (1%)
Frame = -3
Query: 345 TPRPLEADRTRFSFRPRHQPIVLKRQRAHW*RPRWTLASYRRFASRATNRYRKSTIPTRF 166
+P P++ R+RF + RHQ RQR + R + +A R+ R + +
Sbjct: 367 SPYPVQEPRSRFQ-QQRHQKTETHRQRVVFRREKMEMARERKVWLRVLGIITGAFVVCWL 425
Query: 165 PVFVTALCRNSVAV-CDMKS 109
P FV A+ + CDM S
Sbjct: 426 PFFVVAVVKPMCGTPCDMPS 445
>emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 31.2 bits (69), Expect = 3.4
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 132 QSCGITQSRKQESASELSTCDSGS*LGKQIADMTQGSNGAVTNVRADASTQSADDGGGKK 311
+ CG Q + SA E SG+ +GKQ ++ G + A +R D+ +Q G++
Sbjct: 330 KGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQ 389
Query: 312 TESG 323
G
Sbjct: 390 NYGG 393
