KCC001427A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001427A_C01 KCC001427A_c01
GGCAACTACAACGCCCACATGAGCGCCTACCCCGAGGTGGACTGGCAGGCGGTGGCGGAG
GAGTTCGTGCCCTCGCTGGGCCTGGAGTTTAACCCCTACGTGACCCAGATCGAGCCGCAC
GACTACATCGCCGAGCTGTACTCGGCCATCATCCGCTTCAACAACATCCTCATCGACTTT
GACCGCGACGTGTGGGGCTACATCAGCCTGGGCTACTTCAAGCAGCGCACCATCGCCGGC
GAGGTGGGCTCCTCCACCATGCCGCACAAGGTGAACCCCATCGACTTTGAGAACAGCGAG
GGCAACCTGGGCCTGGCCAACGCGCTGATGGACCACCTGATCAACAAGCTGCCCATCAGC
CGCTGGCAACGCGACCTCACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCATCGGG
CACGCGCTGCTGGCCTACGCCGCCAGCCTCAAGGGCATCTCCAAGCTGCAGATCGACACG
GCGCGCCTGGCCGCCGACCTGGACAACAGCTGGGAGGTACTGGCC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001427A_C01 KCC001427A_c01
         (525 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_251319.1| adenylosuccinate lyase [Pseudomonas aeruginosa ...   292  2e-78
ref|ZP_00135937.1| COG0015: Adenylosuccinate lyase [Pseudomonas ...   292  2e-78
ref|NP_718219.1| adenylosuccinate lyase [Shewanella oneidensis M...   292  2e-78
ref|ZP_00128327.1| COG0015: Adenylosuccinate lyase [Pseudomonas ...   291  3e-78
ref|ZP_00083686.1| COG0015: Adenylosuccinate lyase [Pseudomonas ...   290  6e-78

>ref|NP_251319.1| adenylosuccinate lyase [Pseudomonas aeruginosa PA01]
           gi|11347387|pir||F83317 adenylosuccinate lyase PA2629
           [imported] - Pseudomonas aeruginosa (strain PAO1)
           gi|9948696|gb|AAG06017.1|AE004691_8 adenylosuccinate
           lyase [Pseudomonas aeruginosa PAO1]
          Length = 456

 Score =  292 bits (748), Expect = 2e-78
 Identities = 138/176 (78%), Positives = 155/176 (87%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   GNYNAHMSAYPEVDWQAVAEEFVPS-LGLEFNPYVTQIEPHDYIAELYSAIIRFNNILID 177
           GNYNAH+SAYPEVDW+A A +F+   LGL FNPY TQIEPHDYIAEL+ AI RFN ILID
Sbjct: 212 GNYNAHLSAYPEVDWEANARQFIEGDLGLTFNPYTTQIEPHDYIAELFDAIARFNTILID 271

Query: 178 FDRDVWGYISLGYFKQRTIAGEVGSSTMPHKVNPIDFENSEGNLGLANALMDHLINKLPI 357
           FDRDVWGYISLGYFKQ+T+AGE+GSSTMPHKVNPIDFENSEGNLG+ANAL  HL +KLPI
Sbjct: 272 FDRDVWGYISLGYFKQKTVAGEIGSSTMPHKVNPIDFENSEGNLGIANALFQHLASKLPI 331

Query: 358 SRWQRDLTDSTVLRNLGVGIGHALLAYAASLKGISKLQIDTARLAADLDNSWEVLA 525
           SRWQRDLTDSTVLRNLGVGI H+++AY ASLKGI KL+++  R+A DLD  WEVLA
Sbjct: 332 SRWQRDLTDSTVLRNLGVGIAHSIIAYEASLKGIGKLELNAQRIAEDLDACWEVLA 387

>ref|ZP_00135937.1| COG0015: Adenylosuccinate lyase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 456

 Score =  292 bits (747), Expect = 2e-78
 Identities = 138/176 (78%), Positives = 155/176 (87%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   GNYNAHMSAYPEVDWQAVAEEFVPS-LGLEFNPYVTQIEPHDYIAELYSAIIRFNNILID 177
           GNYNAH+SAYPEVDW+A A +F+   LGL FNPY TQIEPHDYIAEL+ AI RFN ILID
Sbjct: 212 GNYNAHLSAYPEVDWEANARQFIEGDLGLTFNPYTTQIEPHDYIAELFDAIARFNTILID 271

Query: 178 FDRDVWGYISLGYFKQRTIAGEVGSSTMPHKVNPIDFENSEGNLGLANALMDHLINKLPI 357
           FDRDVWGYISLGYFKQ+T+AGE+GSSTMPHKVNPIDFENSEGNLG+ANAL  HL +KLPI
Sbjct: 272 FDRDVWGYISLGYFKQKTVAGEIGSSTMPHKVNPIDFENSEGNLGIANALFQHLASKLPI 331

Query: 358 SRWQRDLTDSTVLRNLGVGIGHALLAYAASLKGISKLQIDTARLAADLDNSWEVLA 525
           SRWQRDLTDSTVLRNLGVGI H+++AY ASLKGI KL+++  R+A DLD  WEVLA
Sbjct: 332 SRWQRDLTDSTVLRNLGVGIAHSVIAYEASLKGIGKLELNAQRIAEDLDACWEVLA 387

>ref|NP_718219.1| adenylosuccinate lyase [Shewanella oneidensis MR-1]
           gi|24348683|gb|AAN55663.1|AE015704_14 adenylosuccinate
           lyase [Shewanella oneidensis MR-1]
          Length = 456

 Score =  292 bits (747), Expect = 2e-78
 Identities = 137/175 (78%), Positives = 156/175 (88%)
 Frame = +1

Query: 1   GNYNAHMSAYPEVDWQAVAEEFVPSLGLEFNPYVTQIEPHDYIAELYSAIIRFNNILIDF 180
           GNYNAH+SAYPEV+W A++E FV SLGL +N Y TQIEPHDYIAEL+ AI RFN IL+DF
Sbjct: 212 GNYNAHISAYPEVNWHALSERFVTSLGLHWNAYTTQIEPHDYIAELFDAIARFNTILLDF 271

Query: 181 DRDVWGYISLGYFKQRTIAGEVGSSTMPHKVNPIDFENSEGNLGLANALMDHLINKLPIS 360
           DRDVWGYI+LG+FKQRTIAGE+GSSTMPHKVNPIDFENSEGNLG+ANALM HL  KLP+S
Sbjct: 272 DRDVWGYIALGHFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGIANALMQHLAAKLPVS 331

Query: 361 RWQRDLTDSTVLRNLGVGIGHALLAYAASLKGISKLQIDTARLAADLDNSWEVLA 525
           RWQRDLTDSTVLRNLGVGI H+L+AY A+LKGISKLQ++   L A+LD +WEVLA
Sbjct: 332 RWQRDLTDSTVLRNLGVGIAHSLIAYQATLKGISKLQVNEEHLRAELDQNWEVLA 386

>ref|ZP_00128327.1| COG0015: Adenylosuccinate lyase [Pseudomonas syringae pv. syringae
           B728a]
          Length = 472

 Score =  291 bits (745), Expect = 3e-78
 Identities = 137/176 (77%), Positives = 155/176 (87%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   GNYNAHMSAYPEVDWQAVAEEFVPS-LGLEFNPYVTQIEPHDYIAELYSAIIRFNNILID 177
           GNYNAH+SAYP++DW+A A  F+   LGL FNPY TQIEPHDYIAEL+ AI RFN ILID
Sbjct: 228 GNYNAHLSAYPDIDWEANARAFIEDELGLGFNPYTTQIEPHDYIAELFDAIARFNTILID 287

Query: 178 FDRDVWGYISLGYFKQRTIAGEVGSSTMPHKVNPIDFENSEGNLGLANALMDHLINKLPI 357
           FDRD+WGYISLGYFKQRTIAGE+GSSTMPHKVNPIDFENSEGNLG+ANAL  HL +KLP+
Sbjct: 288 FDRDIWGYISLGYFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGIANALFQHLASKLPV 347

Query: 358 SRWQRDLTDSTVLRNLGVGIGHALLAYAASLKGISKLQIDTARLAADLDNSWEVLA 525
           SRWQRDLTDSTVLRNLGVG  H+++AY ASLKGISKL+++  R+AADLD  WEVLA
Sbjct: 348 SRWQRDLTDSTVLRNLGVGFAHSVIAYEASLKGISKLELNEQRIAADLDACWEVLA 403

>ref|ZP_00083686.1| COG0015: Adenylosuccinate lyase [Pseudomonas fluorescens PfO-1]
          Length = 471

 Score =  290 bits (743), Expect = 6e-78
 Identities = 137/176 (77%), Positives = 155/176 (87%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   GNYNAHMSAYPEVDWQAVAEEFVPS-LGLEFNPYVTQIEPHDYIAELYSAIIRFNNILID 177
           GNYNAH+SAYP++DW+A A  F+   LGL FNPY TQIEPHDYIAEL+ AI RFN ILID
Sbjct: 227 GNYNAHLSAYPQIDWEANARAFIEDELGLGFNPYTTQIEPHDYIAELFDAIARFNTILID 286

Query: 178 FDRDVWGYISLGYFKQRTIAGEVGSSTMPHKVNPIDFENSEGNLGLANALMDHLINKLPI 357
           FDRD+WGYISLGYFKQRTIAGE+GSSTMPHKVNPIDFENSEGNLG+ANAL  HL +KLPI
Sbjct: 287 FDRDIWGYISLGYFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGIANALFQHLASKLPI 346

Query: 358 SRWQRDLTDSTVLRNLGVGIGHALLAYAASLKGISKLQIDTARLAADLDNSWEVLA 525
           SRWQRDLTDSTVLRNLGVG  H+++AY ASLKGISKL+++  ++AADLD  WEVLA
Sbjct: 347 SRWQRDLTDSTVLRNLGVGFAHSVIAYEASLKGISKLELNADKIAADLDACWEVLA 402



EST assemble image


clone accession position
1 HC011g06_r AV632718 1 590
2 CM047c04_r AV388593 343 627




Chlamydomonas reinhardtii
Kazusa DNA Research Institute