Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001426A_C01 KCC001426A_c01
(709 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q42695|RUBC_CHLRE RUBISCO SUBUNIT BINDING-PROTEIN BETA-2 SUBU... 441 e-123
pir||S56644 chaperonin 60 beta-1 chain - Chlamydomonas reinhardt... 363 2e-99
sp|Q42693|RUBB_CHLRE RUBISCO SUBUNIT BINDING-PROTEIN BETA-1 SUBU... 363 2e-99
sp|P08927|RUBB_PEA RuBisCO subunit binding-protein beta subunit,... 345 3e-94
pir||T07733 probable chaperonin 60 beta chain precursor, chlorop... 345 3e-94
>sp|Q42695|RUBC_CHLRE RUBISCO SUBUNIT BINDING-PROTEIN BETA-2 SUBUNIT (60 KD CHAPERONIN
BETA-2 SUBUNIT) (CPN-60 BETA-2) gi|2129461|pir||S56646
chaperonin 60 beta-2 chain - Chlamydomonas reinhardtii
(fragment) gi|1293535|gb|AAA98643.1| chaperonin
beta-like subunit
Length = 259
Score = 441 bits (1134), Expect = e-123
Identities = 232/233 (99%), Positives = 232/233 (99%)
Frame = +1
Query: 10 SSYLEDIAILTGGTVVNDELGITLEKATEEVLGLAAKVSISKEATTIVGDGRTQQQVEGR 189
SSYLEDIAILTGGTVV DELGITLEKATEEVLGLAAKVSISKEATTIVGDGRTQQQVEGR
Sbjct: 1 SSYLEDIAILTGGTVVKDELGITLEKATEEVLGLAAKVSISKEATTIVGDGRTQQQVEGR 60
Query: 190 VKQIRNLAAETEQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATKA 369
VKQIRNLAAETEQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATKA
Sbjct: 61 VKQIRNLAAETEQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATKA 120
Query: 370 AVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGTNGS 549
AVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGTNGS
Sbjct: 121 AVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGTNGS 180
Query: 550 VVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTF 708
VVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTF
Sbjct: 181 VVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTF 233
>pir||S56644 chaperonin 60 beta-1 chain - Chlamydomonas reinhardtii (fragment)
Length = 435
Score = 363 bits (931), Expect = 2e-99
Identities = 183/236 (77%), Positives = 211/236 (88%)
Frame = +1
Query: 1 ERKSSYLEDIAILTGGTVVNDELGITLEKATEEVLGLAAKVSISKEATTIVGDGRTQQQV 180
ER+SSYLEDIAILTGGTVV DE+G++LE+AT+ VLG AAK++I+KE TT+VGDG T V
Sbjct: 167 ERRSSYLEDIAILTGGTVVGDEMGVSLEQATDAVLGTAAKITITKERTTVVGDGSTAADV 226
Query: 181 EGRVKQIRNLAAETEQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNA 360
RVKQIRNL +T+Q+YE+EKL ERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNA
Sbjct: 227 AARVKQIRNLQMQTDQDYEREKLQERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNA 286
Query: 361 TKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGT 540
T+AAVEEG+V GGGCTLLRLS+KVD IK +++ EQ+MGADIIKRAL YPIKLIA NAG
Sbjct: 287 TRAAVEEGVVPGGGCTLLRLSEKVDVIKRRMTDPEQQMGADIIKRALCYPIKLIAQNAGV 346
Query: 541 NGSVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTF 708
NGSVVM VM N+D+P+YGYNAATD+FE+LME GIIDP+KVVRCS+ENAVSVAKTF
Sbjct: 347 NGSVVMNEVMKNLDRPHYGYNAATDSFENLMETGIIDPSKVVRCSMENAVSVAKTF 402
>sp|Q42693|RUBB_CHLRE RUBISCO SUBUNIT BINDING-PROTEIN BETA-1 SUBUNIT (60 KD CHAPERONIN
BETA-1 SUBUNIT) (CPN-60 BETA-1) gi|603911|gb|AAA98641.1|
chaperonin beta-like subunit
Length = 435
Score = 363 bits (931), Expect = 2e-99
Identities = 183/236 (77%), Positives = 211/236 (88%)
Frame = +1
Query: 1 ERKSSYLEDIAILTGGTVVNDELGITLEKATEEVLGLAAKVSISKEATTIVGDGRTQQQV 180
ER+SSYLEDIAILTGGTVV DE+G++LE+AT+ VLG AAK++I+KE TT+VGDG T V
Sbjct: 167 ERRSSYLEDIAILTGGTVVGDEMGVSLEQATDAVLGTAAKITITKERTTVVGDGSTAADV 226
Query: 181 EGRVKQIRNLAAETEQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNA 360
RVKQIRNL +T+Q+YE+EKL ERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNA
Sbjct: 227 AARVKQIRNLQMQTDQDYEREKLQERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNA 286
Query: 361 TKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGT 540
T+AAVEEG+V GGGCTLLRLS+KVD IK +++ EQ+MGADIIKRAL YPIKLIA NAG
Sbjct: 287 TRAAVEEGVVPGGGCTLLRLSEKVDVIKRRMTDPEQQMGADIIKRALCYPIKLIAQNAGV 346
Query: 541 NGSVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTF 708
NGSVVM VM N+D+P+YGYNAATD+FE+LME GIIDP+KVVRCS+ENAVSVAKTF
Sbjct: 347 NGSVVMNEVMKNLDRPHYGYNAATDSFENLMETGIIDPSKVVRCSMENAVSVAKTF 402
>sp|P08927|RUBB_PEA RuBisCO subunit binding-protein beta subunit, chloroplast precursor
(60 kDa chaperonin beta subunit) (CPN-60 beta)
gi|7443853|pir||T06412 probable chaperonin 60 beta chain
- garden pea chloroplast gi|806808|gb|AAA66365.1|
chaperonin precursor [Pisum sativum]
Length = 595
Score = 345 bits (886), Expect = 3e-94
Identities = 176/236 (74%), Positives = 207/236 (87%)
Frame = +1
Query: 1 ERKSSYLEDIAILTGGTVVNDELGITLEKATEEVLGLAAKVSISKEATTIVGDGRTQQQV 180
ERKS YL+DIAILTGGTV+ +E+G+TL+KA +EVLG AAKV ++K+ TTIVGDG TQ+ V
Sbjct: 331 ERKSQYLDDIAILTGGTVIREEVGLTLDKADKEVLGNAAKVVLTKDTTTIVGDGSTQEAV 390
Query: 181 EGRVKQIRNLAAETEQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNA 360
RV QI+N EQEYEKEKL+ERIA+LSGGVA+IQVGAQTETELKEKKLRVEDALNA
Sbjct: 391 NKRVSQIKNQIEAAEQEYEKEKLSERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNA 450
Query: 361 TKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGT 540
TKAAVEEGIV+GGGCTLLRL+ KVD+IK+TL+N+E+K+GADI+KRALSYP+KLIA NAG
Sbjct: 451 TKAAVEEGIVVGGGCTLLRLASKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGV 510
Query: 541 NGSVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTF 708
NGSVV ++V+ + D P YGYNAAT +EDLM AGIIDPTKVVRC LE+A SVAKTF
Sbjct: 511 NGSVVSEKVLSS-DNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTF 565
>pir||T07733 probable chaperonin 60 beta chain precursor, chloroplast (clone
potbchap1) - potato gi|1762130|gb|AAB39827.1|
chaperonin-60 beta subunit
Length = 599
Score = 345 bits (886), Expect = 3e-94
Identities = 176/236 (74%), Positives = 207/236 (87%)
Frame = +1
Query: 1 ERKSSYLEDIAILTGGTVVNDELGITLEKATEEVLGLAAKVSISKEATTIVGDGRTQQQV 180
ERKS YL+DIA LTGGTV+ +ELG+TL+KA +EVLG AAKV ++K+ATTIVGDG TQ+ V
Sbjct: 336 ERKSQYLDDIATLTGGTVIREELGLTLDKADKEVLGHAAKVVLTKDATTIVGDGSTQEAV 395
Query: 181 EGRVKQIRNLAAETEQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNA 360
RV QI+NL +Q+YEKEKLNERIA+LSGGVA+IQVGAQTETELKEKKLRVEDALNA
Sbjct: 396 NKRVAQIKNLIEAADQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNA 455
Query: 361 TKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGT 540
TKAAVEEGIV+GGGCTLLRL+ KVD+IK TL+N+E+K+GADI+KRALSYP+KLIA NAG
Sbjct: 456 TKAAVEEGIVVGGGCTLLRLAAKVDAIKGTLANDEEKVGADIVKRALSYPLKLIAKNAGV 515
Query: 541 NGSVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTF 708
NGSVV ++V+ + D P +GYNAAT +EDLM AGIIDPTKVVRC LE+A SVAKTF
Sbjct: 516 NGSVVSEKVLSS-DDPKFGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTF 570
