Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001420A_C01 KCC001420A_c01
(556 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_352404.1| similar to contains similarity to cell wall-pla... 37 0.14
ref|XP_293223.2| similar to contains similarity to cell wall-pla... 37 0.14
ref|NP_496184.1| location Of Vulva defective LOV-1, polycystin (... 35 0.67
pir||T21460 hypothetical protein ZK945.10 - Caenorhabditis elegans 35 0.67
emb|CAE05053.1| OSJNBa0049H08.14 [Oryza sativa (japonica cultiva... 34 1.5
>ref|XP_352404.1| similar to contains similarity to cell wall-plasma membrane linker
protein~gene_id:MKA23.5 [Homo sapiens]
Length = 1000
Score = 37.4 bits (85), Expect = 0.14
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = +3
Query: 105 TVPSYSLTSVLGRAPTHIYSVVKSSKSPHAPYVRPNA*TLFMS*P*LQTIHVHTTDERAV 284
++ S ++ SVL APT KS + PH+ +H+ + +V
Sbjct: 73 SIHSVNICSVL-TAPTASSPRPKSPRHPHS---------------------IHSVNICSV 110
Query: 285 IHTPPAANPAVRHLAVAGSKLCTPTLHSDPDPDPDHSQHRIIHA-VADSPRPCR 443
+ P A +P +HL S L PT S P P H H ++ A A SPRP R
Sbjct: 111 LTAPTAPSPRPQHLHRPHSVLTAPTA-SSPRPQRPHGVHSLLIAPTAPSPRPQR 163
Score = 32.7 bits (73), Expect = 3.3
Identities = 37/138 (26%), Positives = 58/138 (41%), Gaps = 8/138 (5%)
Frame = +3
Query: 54 PQLLQYRHVDLCQRPELTVPSYSLTSVLGRAPTHIYSVVKSSKSPHAPYVRPNA*TLFMS 233
PQ H L R LT P+ S S + P ++S + + + P RP+ ++
Sbjct: 287 PQCRHRVHSVLNVRSVLTAPTAS--SPRPQRPHRVHSALTAPTASSPPPQRPHHPDSVLT 344
Query: 234 *P*LQTIH------VHTT-DERAVIHTPPAANPAVRHLAVAGSKLCTPTLHSDPDPDPDH 392
++ VH+ + R+ + P A++P + S L PT S P P H
Sbjct: 345 ASTASSLSPQCPHCVHSVLNVRSALTAPTASSPPPQRPHRPDSVLTAPTA-SSPPPQRPH 403
Query: 393 SQHRIIHA-VADSPRPCR 443
H ++ A A SPRP R
Sbjct: 404 GVHSVLTAPTAPSPRPQR 421
>ref|XP_293223.2| similar to contains similarity to cell wall-plasma membrane linker
protein~gene_id:MKA23.5 [Homo sapiens]
Length = 1026
Score = 37.4 bits (85), Expect = 0.14
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = +3
Query: 105 TVPSYSLTSVLGRAPTHIYSVVKSSKSPHAPYVRPNA*TLFMS*P*LQTIHVHTTDERAV 284
++ S ++ SVL APT KS + PH+ +H+ + +V
Sbjct: 155 SIHSVNICSVL-TAPTASSPRPKSPRHPHS---------------------IHSVNICSV 192
Query: 285 IHTPPAANPAVRHLAVAGSKLCTPTLHSDPDPDPDHSQHRIIHA-VADSPRPCR 443
+ P A +P +HL S L PT S P P H H ++ A A SPRP R
Sbjct: 193 LTAPTAPSPRPQHLHRPHSVLTAPTA-SSPRPQRPHGVHSLLIAPTAPSPRPQR 245
Score = 32.7 bits (73), Expect = 3.3
Identities = 37/138 (26%), Positives = 58/138 (41%), Gaps = 8/138 (5%)
Frame = +3
Query: 54 PQLLQYRHVDLCQRPELTVPSYSLTSVLGRAPTHIYSVVKSSKSPHAPYVRPNA*TLFMS 233
PQ H L R LT P+ S S + P ++S + + + P RP+ ++
Sbjct: 369 PQCRHRVHSVLNVRSVLTAPTAS--SPRPQRPHRVHSALTAPTASSPPPQRPHHPDSVLT 426
Query: 234 *P*LQTIH------VHTT-DERAVIHTPPAANPAVRHLAVAGSKLCTPTLHSDPDPDPDH 392
++ VH+ + R+ + P A++P + S L PT S P P H
Sbjct: 427 ASTASSLSPQCPHCVHSVLNVRSALTAPTASSPPPQRPHRPDSVLTAPTA-SSPPPQRPH 485
Query: 393 SQHRIIHA-VADSPRPCR 443
H ++ A A SPRP R
Sbjct: 486 GVHSVLTAPTAPSPRPQR 503
>ref|NP_496184.1| location Of Vulva defective LOV-1, polycystin (lov-1)
[Caenorhabditis elegans]
gi|22096401|sp|Q09624|YS89_CAEEL Hypothetical protein
ZK945.9 in chromosome II gi|6782253|emb|CAB70201.1| C.
elegans LOV-1 protein (corresponding sequence ZK945.9)
[Caenorhabditis elegans] gi|9665271|emb|CAB70192.1| C.
elegans LOV-1 protein (corresponding sequence ZK945.9)
[Caenorhabditis elegans]
Length = 3178
Score = 35.0 bits (79), Expect = 0.67
Identities = 26/89 (29%), Positives = 37/89 (41%)
Frame = +1
Query: 154 TYIPWSNLPSHRMPLTSVPMLKLCL*ASHDYKPYTYTQQMNAQSSTRHPPRILPYATLQS 333
T IP + P L+S+P +C T+T M ++T P T +
Sbjct: 359 TSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTST--TTTEV 416
Query: 334 RALNSALRPCTPTLTLTLITASTVLYTPS 420
+ +S + PT TLT TAST PS
Sbjct: 417 TSTSSTVTTTEPTTTLTTSTASTSTTEPS 445
>pir||T21460 hypothetical protein ZK945.10 - Caenorhabditis elegans
Length = 796
Score = 35.0 bits (79), Expect = 0.67
Identities = 26/89 (29%), Positives = 37/89 (41%)
Frame = +1
Query: 154 TYIPWSNLPSHRMPLTSVPMLKLCL*ASHDYKPYTYTQQMNAQSSTRHPPRILPYATLQS 333
T IP + P L+S+P +C T+T M ++T P T +
Sbjct: 359 TSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTST--TTTEV 416
Query: 334 RALNSALRPCTPTLTLTLITASTVLYTPS 420
+ +S + PT TLT TAST PS
Sbjct: 417 TSTSSTVTTTEPTTTLTTSTASTSTTEPS 445
>emb|CAE05053.1| OSJNBa0049H08.14 [Oryza sativa (japonica cultivar-group)]
Length = 260
Score = 33.9 bits (76), Expect = 1.5
Identities = 25/73 (34%), Positives = 33/73 (44%)
Frame = +3
Query: 270 DERAVIHTPPAANPAVRHLAVAGSKLCTPTLHSDPDPDPDHSQHRIIHAVADSPRPCRLL 449
DE AV A N A + +G + TP S D D + R++ AVA +PRP +
Sbjct: 5 DEGAVEDVRAATNRASGYFFFSGREHWTPGWRSSNDGD---AASRVV-AVATNPRPALSV 60
Query: 450 GRAGFCVMPPRHT 488
G PPR T
Sbjct: 61 AMVGMVTTPPRTT 73
