Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001414A_C01 KCC001414A_c01
(562 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca] 50 2e-05
ref|ZP_00009817.1| COG2885: Outer membrane protein and related p... 42 4e-05
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote... 47 2e-04
ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-... 47 2e-04
ref|NP_742062.1| proline-rich proteoglycan 2 [Rattus norvegicus]... 46 3e-04
>ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca]
Length = 754
Score = 50.1 bits (118), Expect = 2e-05
Identities = 52/151 (34%), Positives = 68/151 (44%), Gaps = 3/151 (1%)
Frame = -2
Query: 510 PEAHSRICAIVTDARSSIVIREPPRSAAGEMEWMPSRPSSR*GPAPRGG*RTCPTSAC-- 337
P+A S A T SS EP RSA+ S PS PAP +CPTS
Sbjct: 169 PDASSPSSAPSTQPASSPP--EPLRSASPSKNSTNS-PSPH-PPAPAAS-SSCPTSTANA 223
Query: 336 PPYWQTRPQRSPGFRRG-SPPGSWGPSLVCARCRRARRPVAQAAPTPVSPHAVASIPERT 160
PP T P S SPP +W P+ C A + + T VSP V+S +
Sbjct: 224 PPTCPTPPAASTASPEPTSPPPTW-PAPSSKACSAASLTPSTPSSTKVSPSTVSS---SS 279
Query: 159 AAGPPP*AAEPERPRSSARPPPAIVQGSSTP 67
AA P P + P P+SSA P P+ + +++P
Sbjct: 280 AAAPAPPQSAPSPPKSSAAPSPSQPKANTSP 310
Score = 32.7 bits (73), Expect = 3.4
Identities = 35/135 (25%), Positives = 50/135 (36%), Gaps = 19/135 (14%)
Frame = -2
Query: 444 PPRSAAGEMEWMPSRPSSR*GPAPRGG*RTCPTSACPPYWQTRPQRSPGFRRGSPPG--- 274
P ++AG P+ P P P+ +CPT+ P P SP +PP
Sbjct: 19 PSPNSAGSPNTNPTTP-----PEPKAS--SCPTTGSPNALPKPPNPSP--TAATPPAPAT 69
Query: 273 ------------SWGPSLVCARCRRARRPV--AQAAPTPVSPHAVASIPERTAAGPP--P 142
S PS + R + P + A+P P SP + +S P PP P
Sbjct: 70 TTPPPTPTGPTCSPSPSAANSAPRESPPPPKSSAASPPPNSPPSTSSAPAPATTWPPHSP 129
Query: 141 *AAEPERPRSSARPP 97
+P S + PP
Sbjct: 130 STPDPATSSSPSAPP 144
Score = 31.2 bits (69), Expect(2) = 0.31
Identities = 38/139 (27%), Positives = 51/139 (36%), Gaps = 13/139 (9%)
Frame = -2
Query: 444 PPRSAAGEMEWMPSRPSSR*GPAPRGG*RTCPTSACPPYWQTRPQRSPGFRRGSPPGSWG 265
PP+S+A S PS+ PAP + PP+ + P + +PP
Sbjct: 98 PPKSSAASPP-PNSPPSTSSAPAP--------ATTWPPHSPSTPDPATSSSPSAPPEPPS 148
Query: 264 PSLVCARCRRARRPVAQAAPTPVSP-----HAVASIPERTAAGPPP*AAEPERPRSSAR- 103
PS P AP+P SP + +S P A PP EP R S ++
Sbjct: 149 PS-------PKNPPPTPPAPSPDSPTPPDASSPSSAPSTQPASSPP---EPLRSASPSKN 198
Query: 102 -------PPPAIVQGSSTP 67
PPA SS P
Sbjct: 199 STNSPSPHPPAPAASSSCP 217
Score = 23.9 bits (50), Expect(2) = 0.31
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 533 PPWAAGSALKPTPASVPS*PTPAPP 459
PP G P+P++ S P +PP
Sbjct: 73 PPTPTGPTCSPSPSAANSAPRESPP 97
>ref|ZP_00009817.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Rhodopseudomonas palustris]
Length = 689
Score = 42.0 bits (97), Expect = 0.006
Identities = 36/110 (32%), Positives = 44/110 (39%), Gaps = 7/110 (6%)
Frame = -2
Query: 399 PSSR*GPAPRGG*RTCPT---SACPPYWQTRPQRSPGFRRGSPPGSWGPSLVCARCRRAR 229
P R PAP + P +A PP+ P P R +PP + +RA
Sbjct: 58 PGPRPAPAPPKAAPSAPPPPPAAAPPH-VAPPPPPPAPPRAAPPPPPPAAAPAPAPKRAE 116
Query: 228 RPV----AQAAPTPVSPHAVASIPERTAAGPPP*AAEPERPRSSARPPPA 91
P + +AP P PHA P PP AA ERP A PPPA
Sbjct: 117 PPPPPPPSHSAPPPPPPHAAPPPPPAPKPSAPPTAAPAERP---AAPPPA 163
Score = 40.8 bits (94), Expect(2) = 4e-05
Identities = 42/131 (32%), Positives = 54/131 (41%), Gaps = 13/131 (9%)
Frame = -2
Query: 444 PPRSAAGEMEWMPSRPSSR*GPAPRGG*RTCPTSACPPYWQTRPQRSPGFRRGSPPGSWG 265
PP AA P +PS+ AP P +A P P RRG PPG+
Sbjct: 131 PPPHAAPPPPPAP-KPSAPPTAAPAERPAAPPPAAAPVRPPAPPAGEAPQRRGPPPGAVP 189
Query: 264 PSLV--------CARCRRARRPVAQAAPTPVSPHAVASIPERTAAG--PPP*AAE---PE 124
P+ V A+ A++P + P P A + P TA G PPP A P
Sbjct: 190 PNAVPPNAAAPDAAKPDAAKQPPGERRGPP--PGAPGTPPNATAPGMTPPPGEAPRRGPP 247
Query: 123 RPRSSARPPPA 91
P ++A PPPA
Sbjct: 248 PPPAAANPPPA 258
Score = 38.5 bits (88), Expect = 0.063
Identities = 33/106 (31%), Positives = 36/106 (33%)
Frame = -2
Query: 384 GPAPRGG*RTCPTSACPPYWQTRPQRSPGFRRGSPPGSWGPSLVCARCRRARRPVAQAAP 205
GPAP P + + PG R P PS A P AAP
Sbjct: 42 GPAP-----------APSEEKAKEAPPPGPRPAPAPPKAAPS--------APPPPPAAAP 82
Query: 204 TPVSPHAVASIPERTAAGPPP*AAEPERPRSSARPPPAIVQGSSTP 67
V+P P R A PPP AA P A PPP S P
Sbjct: 83 PHVAPPPPPPAPPRAAPPPPPPAAAPAPAPKRAEPPPPPPPSHSAP 128
Score = 38.1 bits (87), Expect(2) = 0.009
Identities = 38/129 (29%), Positives = 44/129 (33%), Gaps = 3/129 (2%)
Frame = -2
Query: 444 PPRSAAGEM---EWMPSRPSSR*GPAPRGG*RTCPTSACPPYWQTRPQRSPGFRRGSPPG 274
PP +AA + + P R GP P G P +A P P +P RRG PP
Sbjct: 194 PPNAAAPDAAKPDAAKQPPGERRGPPP--GAPGTPPNATAPGMTPPPGEAP--RRGPPPP 249
Query: 273 SWGPSLVCARCRRARRPVAQAAPTPVSPHAVASIPERTAAGPPP*AAEPERPRSSARPPP 94
A P AAPTP A + P A P A RP P P
Sbjct: 250 P-----------AAANPPPAAAPTPAPSAAPQAAPTSPANPSGPAVAPVARPSGERGPQP 298
Query: 93 AIVQGSSTP 67
G P
Sbjct: 299 GAPAGGPPP 307
Score = 34.7 bits (78), Expect(2) = 0.053
Identities = 38/129 (29%), Positives = 46/129 (35%), Gaps = 4/129 (3%)
Frame = -2
Query: 441 PRSAAGEMEWMPSRPSSR*GPAPRGG*RTCPTSACPPYWQTRPQRSPGFRRGSPPGSWGP 262
P + +G +RPS GP P P PP RPQ PG PG+ GP
Sbjct: 276 PANPSGPAVAPVARPSGERGPQPGA-----PAGGPPP----RPQAGPG-----APGA-GP 320
Query: 261 SLVCARCRRARRPVAQAAPTPVSPHAVASIPERTAAGPPP*AAEPERPRSSARPPP---- 94
++ P Q P P P + P PPP A P A PPP
Sbjct: 321 AVA--------PPPGQPQPVPPQPGQPPAGPAVAPPAPPPPAV--TAPIPPAPPPPQALT 370
Query: 93 AIVQGSSTP 67
I G+ P
Sbjct: 371 PIAPGAQAP 379
Score = 34.7 bits (78), Expect = 0.90
Identities = 33/118 (27%), Positives = 42/118 (34%), Gaps = 4/118 (3%)
Frame = -2
Query: 408 PSRPSSR*GPAPRGG*RTCPTSACPPYWQTRPQRSPGFRRGSPPGSWGPSLVCARCRRAR 229
PS ++ P P P A P P +P PP P
Sbjct: 47 PSEEKAKEAPPPGPRPAPAPPKAAPSAPPPPPAAAPPHVAPPPPPPAPP----------- 95
Query: 228 RPVAQAAPTPVSPHAV-ASIPERTAAGPPP*---AAEPERPRSSARPPPAIVQGSSTP 67
+AAP P P A A P+R PPP +A P P +A PPP + S+ P
Sbjct: 96 ----RAAPPPPPPAAAPAPAPKRAEPPPPPPPSHSAPPPPPPHAAPPPPPAPKPSAPP 149
Score = 29.6 bits (65), Expect(2) = 5.0
Identities = 34/131 (25%), Positives = 42/131 (31%), Gaps = 6/131 (4%)
Frame = -2
Query: 441 PRSAAGEMEWMPSRPSSR*GPAPRGG*RTCPTSACPPYWQTRPQRSPGFRRGSPPGSWGP 262
P A E P P S P P P P P +P R +PP + P
Sbjct: 108 PAPAPKRAEPPPPPPPSHSAPPPPPP-HAAPPPPPAPKPSAPPTAAPAERPAAPPPAAAP 166
Query: 261 SLVCA-----RCRRARRPVAQAAPTPVSPHAVA-SIPERTAAGPPP*AAEPERPRSSARP 100
A +R P P V P+A A + AA PP P + P
Sbjct: 167 VRPPAPPAGEAPQRRGPPPGAVPPNAVPPNAAAPDAAKPDAAKQPPGERRGPPPGAPGTP 226
Query: 99 PPAIVQGSSTP 67
P A G + P
Sbjct: 227 PNATAPGMTPP 237
Score = 27.7 bits (60), Expect(2) = 4e-05
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 536 SPPWAAGSALKPTPASVPS*PTPAPP 459
+PP AA SA P PA+ P P PP
Sbjct: 65 APPKAAPSAPPPPPAAAPPHVAPPPP 90
Score = 23.1 bits (48), Expect(2) = 0.053
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -3
Query: 536 SPPWAAGSALKPTPASVPS*PTPAPPS 456
+PP A + P P P P PP+
Sbjct: 225 TPPNATAPGMTPPPGEAPRRGPPPPPA 251
Score = 22.3 bits (46), Expect(2) = 0.009
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = -3
Query: 533 PPWAAGSALKPTP--ASVPS*PTP---APPSLYVSHREALP 426
PP + SA P P A+ P P P APP+ + R A P
Sbjct: 120 PPPPSHSAPPPPPPHAAPPPPPAPKPSAPPTAAPAERPAAP 160
Score = 21.2 bits (43), Expect(2) = 5.0
Identities = 11/30 (36%), Positives = 12/30 (39%)
Frame = -3
Query: 551 PH*GWSPPWAAGSALKPTPASVPS*PTPAP 462
PH PP A P P + P PAP
Sbjct: 83 PHVAPPPPPPAPPRAAPPPPPPAAAPAPAP 112
>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
plenty-of-prolines-101; serine/arginine repetitive
matrix protein 1 [Rattus norvegicus]
Length = 958
Score = 46.6 bits (109), Expect = 2e-04
Identities = 51/155 (32%), Positives = 62/155 (39%), Gaps = 4/155 (2%)
Frame = -2
Query: 519 RFRPEAHSRICAIVTDARSSIVIREPPRSAAGEMEWMPSR-PSSR*GPAPRGG*RTCPTS 343
R R ++ SR T +RS R R + + P R PS R P+PR R P
Sbjct: 336 RSRSKSRSR-----TRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPR---RRTPPR 387
Query: 342 ACPPYWQTRPQRSPGFRRGSPPGSWGPSLVCARCRRARRPVAQAAPTPVSPHAVASIPER 163
PP + R RSPG RR S S + R+R P P P S P R
Sbjct: 388 RMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSP-------PKKPPKRTSSPPR 440
Query: 162 TAAGPPP*AAEP---ERPRSSARPPPAIVQGSSTP 67
P A+ P RP S A PPP + S TP
Sbjct: 441 KTRRLSPSASPPRRRHRPSSPATPPPK-TRHSPTP 474
Score = 39.3 bits (90), Expect = 0.037
Identities = 34/113 (30%), Positives = 50/113 (44%)
Frame = -2
Query: 402 RPSSR*GPAPRGG*RTCPTSACPPYWQTRPQRSPGFRRGSPPGSWGPSLVCARCRRARRP 223
+P+ R P+PR P ++ PP + SP R+ SP S P +R ++
Sbjct: 731 QPNKRHSPSPRP---RAPQTSSPPPVRRGASASPQGRQ-SPSPSTRPIRRVSRTPEPKKI 786
Query: 222 VAQAAPTPVSPHAVASIPERTAAGPPP*AAEPERPRSSARPPPAIVQGSSTPW 64
A+P+P S V+S R+ +G P EP + A P P Q ST W
Sbjct: 787 KKAASPSPQSVRRVSS--SRSVSGSP----EPTAKKPPAPPSPVQSQSPSTNW 833
>ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-of-prolines-101;
serine/arginine repetitive matrix protein 1 [Mus
musculus] gi|3153821|gb|AAC17422.1|
plenty-of-prolines-101; POP101; SH3-philo-protein [Mus
musculus]
Length = 897
Score = 46.6 bits (109), Expect = 2e-04
Identities = 51/155 (32%), Positives = 62/155 (39%), Gaps = 4/155 (2%)
Frame = -2
Query: 519 RFRPEAHSRICAIVTDARSSIVIREPPRSAAGEMEWMPSR-PSSR*GPAPRGG*RTCPTS 343
R R ++ SR T +RS R R + + P R PS R P+PR R P
Sbjct: 277 RSRSKSRSR-----TRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPR---RRTPPR 328
Query: 342 ACPPYWQTRPQRSPGFRRGSPPGSWGPSLVCARCRRARRPVAQAAPTPVSPHAVASIPER 163
PP + R RSPG RR S S + R+R P P P S P R
Sbjct: 329 RMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSP-------PKKPPKRTSSPPR 381
Query: 162 TAAGPPP*AAEP---ERPRSSARPPPAIVQGSSTP 67
P A+ P RP S A PPP + S TP
Sbjct: 382 KTRRLSPSASPPRRRHRPSSPATPPPK-TRHSPTP 415
Score = 32.7 bits (73), Expect = 3.4
Identities = 34/119 (28%), Positives = 47/119 (38%), Gaps = 6/119 (5%)
Frame = -2
Query: 402 RPSSR*GPAPRGG*RTCPTSACPPYWQTRPQRSPGFRRGSPPGSWGPSLVCARCRRARRP 223
+P+ R P+PR P ++ PP + SP R+ SP S P +R ++
Sbjct: 696 QPNKRHSPSPRP---RAPQTSSPPPVRRGASASPQGRQ-SPSPSTRPIRRVSRTPEPKKI 751
Query: 222 VAQAAPTPVSPHAVASI------PERTAAGPPP*AAEPERPRSSARPPPAIVQGSSTPW 64
A+P+P S V+S PE A PP A P P Q ST W
Sbjct: 752 KKAASPSPQSVRRVSSSRSVSGSPEPAAKKPP------------APPSPVQSQSPSTNW 798
Score = 32.3 bits (72), Expect = 4.5
Identities = 38/126 (30%), Positives = 45/126 (35%), Gaps = 12/126 (9%)
Frame = -2
Query: 408 PSRPSSR*GPAPRGG*R-TCPTSACPPYWQTRPQRSPGFRRGSPPGSWGPSLVCARCRRA 232
PSR +S P+PR + T P WQ+ +S RR PS AR RR+
Sbjct: 523 PSRSAS---PSPRKRQKETSPRMQMGKRWQSPVTKSSRRRRS-------PSPPPARRRRS 572
Query: 231 RRPVAQAAPTPVSPHAVASI---PERTAAGPPP*AAEPE--------RPRSSARPPPAIV 85
P P P P S P R PPP P + R S PPP
Sbjct: 573 PSPAPPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRR 632
Query: 84 QGSSTP 67
S P
Sbjct: 633 TASPPP 638
>ref|NP_742062.1| proline-rich proteoglycan 2 [Rattus norvegicus]
gi|1083764|pir||B48013 proline-rich proteoglycan 2
precursor, parotid - rat gi|310200|gb|AAA03074.1|
proline-rich proteoglycan
Length = 295
Score = 46.2 bits (108), Expect = 3e-04
Identities = 43/127 (33%), Positives = 51/127 (39%), Gaps = 11/127 (8%)
Frame = -2
Query: 441 PRSAAGEMEWMPSRPSSR*GPAPRGG*RTCPTSACPPYWQTRPQR--SPGFRRGSPPGSW 268
P AAG P +P S GP P GG + P PP Q PQR PG +G PP
Sbjct: 100 PPPAAGPQR--PPQPGSPQGPPPPGGPQQRPPQGPPP--QGGPQRPPQPGSPQGPPPPG- 154
Query: 267 GPSLVCARCRRARRPVAQAAP-------TPVSPHAVASIPERTAAGPPP*AA--EPERPR 115
GP + R + P Q P +P P +R GPPP P +P
Sbjct: 155 GP-----QQRPPQGPPPQGGPQRPPQPGSPQGPPPPGGPQQRAPQGPPPQGGPQRPPQPG 209
Query: 114 SSARPPP 94
S PPP
Sbjct: 210 SPQGPPP 216
Score = 35.4 bits (80), Expect = 0.53
Identities = 34/110 (30%), Positives = 39/110 (34%)
Frame = -2
Query: 408 PSRPSSR*GPAPRGG*RTCPTSACPPYWQTRPQRSPGFRRGSPPGSWGPSLVCARCRRAR 229
P +P S GP P GG + P PP Q PQR P + GSP
Sbjct: 205 PPQPGSPQGPPPPGGPQQRPPQGPPP--QGGPQRPP--QPGSP----------------- 243
Query: 228 RPVAQAAPTPVSPHAVASIPERTAAGPPP*AAEPERPRSSARPPPAIVQG 79
Q P P P +R GPPP P+RP P QG
Sbjct: 244 ----QGPPPPGGPQ------QRPPQGPPP-QGGPQRPPQPGNPQGPPQQG 282
