Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001413A_C01 KCC001413A_c01
(623 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_618029.1| peptidylprolyl isomerase [Methanosarcina acetiv... 51 1e-05
ref|NP_632406.1| Peptidyl-prolyl cis-trans isomerase [Methanosar... 51 1e-05
ref|ZP_00078709.1| COG1047: FKBP-type peptidyl-prolyl cis-trans ... 50 2e-05
ref|ZP_00012455.1| hypothetical protein [Rhodopseudomonas palust... 50 2e-05
ref|NP_618030.1| peptidylprolyl isomerase [Methanosarcina acetiv... 47 2e-04
>ref|NP_618029.1| peptidylprolyl isomerase [Methanosarcina acetivorans str. C2A]
gi|19917157|gb|AAM06509.1| peptidylprolyl isomerase
[Methanosarcina acetivorans str. C2A]
Length = 160
Score = 51.2 bits (121), Expect = 1e-05
Identities = 34/96 (35%), Positives = 50/96 (51%), Gaps = 16/96 (16%)
Frame = +2
Query: 365 GDIVSINFVMRDEDGKVLQSSETDLG------------EPLAFEVGAGDMMGNRLFQGFD 508
GD +S+++V + EDG V +SE + +PL F VGAG M+ +GFD
Sbjct: 16 GDTISVDYVGKLEDGTVFDTSEKEAASEAGIYNEMRDYKPLTFTVGAGQMI-----KGFD 70
Query: 509 EAVRGMAVGQTTVL----EASGGEWKRELLFAVPRD 604
E V GM VG+ L E + GE+ E + +PR+
Sbjct: 71 EGVVGMKVGEEKTLEIPPEEAYGEYMEEYVRELPRN 106
>ref|NP_632406.1| Peptidyl-prolyl cis-trans isomerase [Methanosarcina mazei Goe1]
gi|20904749|gb|AAM30078.1| Peptidyl-prolyl cis-trans
isomerase [Methanosarcina mazei Goe1]
Length = 163
Score = 51.2 bits (121), Expect = 1e-05
Identities = 35/96 (36%), Positives = 49/96 (50%), Gaps = 16/96 (16%)
Frame = +2
Query: 365 GDIVSINFVMRDEDGKVLQSSETDLG------------EPLAFEVGAGDMMGNRLFQGFD 508
GD VS+++V + +DG V +SE + EPL F VGAG M+ +GFD
Sbjct: 19 GDAVSVHYVGKLDDGTVFDTSEKEEAMEAGIYNEMRDYEPLKFTVGAGQMI-----KGFD 73
Query: 509 EAVRGMAVGQTTVL----EASGGEWKRELLFAVPRD 604
E V GM G+ +L E + GE+ E +PRD
Sbjct: 74 EGVVGMKAGEEKILKIPPEEAYGEYVEEYARELPRD 109
>ref|ZP_00078709.1| COG1047: FKBP-type peptidyl-prolyl cis-trans isomerases 2
[Methanosarcina barkeri]
Length = 169
Score = 50.4 bits (119), Expect = 2e-05
Identities = 34/96 (35%), Positives = 50/96 (51%), Gaps = 16/96 (16%)
Frame = +2
Query: 365 GDIVSINFVMRDEDGKVLQSS----ETDLG--------EPLAFEVGAGDMMGNRLFQGFD 508
GD +S+N+V + EDG + +S T+ G EPLAF VG G M+ +GFD
Sbjct: 25 GDRISVNYVGKLEDGTIFDTSLKEVATEAGLYNQMRNYEPLAFTVGTGQMI-----KGFD 79
Query: 509 EAVRGMAVGQTTVL----EASGGEWKRELLFAVPRD 604
E V GM VG+ + E + GE++ E +P +
Sbjct: 80 EGVVGMQVGEEKTITIQPEEAYGEYREEFAREIPNN 115
>ref|ZP_00012455.1| hypothetical protein [Rhodopseudomonas palustris]
Length = 829
Score = 50.4 bits (119), Expect = 2e-05
Identities = 30/73 (41%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -1
Query: 617 PPPGGRAALQTTVPASTRH-LRPPERWFAPQPCREPPHRSPGTAGCPSCLRPQLQRPGAR 441
P P GR AL PA+ R+ P AP+P P G A P +RPQ Q P AR
Sbjct: 655 PQPPGRPALGPGGPAAARNGTVAPSAGSAPKPLAGTPPAGGGPAVRPEAVRPQQQAPAAR 714
Query: 440 QGPSPTTAAPCRP 402
P+P AP RP
Sbjct: 715 LRPTPPVTAPARP 727
Score = 33.5 bits (75), Expect = 2.6
Identities = 24/75 (32%), Positives = 31/75 (41%)
Frame = -1
Query: 617 PPPGGRAALQTTVPASTRHLRPPERWFAPQPCREPPHRSPGTAGCPSCLRPQLQRPGARQ 438
PPP AA+ P + ++ P +P P H +P A P PQ P
Sbjct: 730 PPPA--AAVDRRPPPAAPRIQRPAPPTVSRPVPPPMHVAPRVAPPPP---PQHAAPRMAP 784
Query: 437 GPSPTTAAPCRPHPA 393
P+P AAP PH A
Sbjct: 785 PPAPVRAAPPPPHVA 799
>ref|NP_618030.1| peptidylprolyl isomerase [Methanosarcina acetivorans str. C2A]
gi|19917158|gb|AAM06510.1| peptidylprolyl isomerase
[Methanosarcina acetivorans str. C2A]
Length = 181
Score = 47.0 bits (110), Expect = 2e-04
Identities = 33/101 (32%), Positives = 50/101 (48%), Gaps = 16/101 (15%)
Frame = +2
Query: 350 RYAAVGDIVSINFVMRDEDGKVLQSSETDLGE------------PLAFEVGAGDMMGNRL 493
+ A G+IV +++ + E+G V +S + + PL F VGAG ++
Sbjct: 32 KVAKTGNIVKVDYTGKFENGTVFDTSVEETAKEAGIYTEQKNYVPLTFTVGAGQVI---- 87
Query: 494 FQGFDEAVRGMAVGQ----TTVLEASGGEWKRELLFAVPRD 604
+GFD AV GM VG+ T E + GE+ L+ AVP D
Sbjct: 88 -EGFDNAVIGMEVGEEKTVTIPPEEAYGEYNETLILAVPLD 127
